RNA–Protein interactions for RNA: ENST00000506965.5

DDX41-206, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-206ENST00000506965 NISCHQ9Y2I1 1504 aa34.2■■■■□ 3.07
DDX41-206ENST00000506965 ABCC9O60706 1549 aa30.84■■■□□ 2.53
DDX41-206ENST00000506965 CCDC180Q9P1Z9 1646 aa30.76■■■□□ 2.51
DDX41-206ENST00000506965 RB1CC1Q8TDY2 1594 aa29.24■■■□□ 2.27
DDX41-206ENST00000506965 DNAJC5BQ9UF47 199 aa29.12■■■□□ 2.25
DDX41-206ENST00000506965 NACADO15069 1562 aa29.02■■■□□ 2.24
DDX41-206ENST00000506965 UNC13AQ9UPW8 1703 aa28.87■■■□□ 2.21
DDX41-206ENST00000506965 DCAF8L2P0C7V8 631 aa28.71■■■□□ 2.19
DDX41-206ENST00000506965 PABPN1Q86U42 306 aaKnown RBP eCLIP28.66■■■□□ 2.18
DDX41-206ENST00000506965 BICRAQ9NZM4 1560 aa28.6■■■□□ 2.17
DDX41-206ENST00000506965 MYO15BQ96JP2 1530 aa28.59■■■□□ 2.17
DDX41-206ENST00000506965 ZCCHC6Q5VYS8 1495 aaKnown RBP28.35■■■□□ 2.13
DDX41-206ENST00000506965 DCAF1Q9Y4B6 1507 aa28.21■■■□□ 2.11
DDX41-206ENST00000506965 SCRIBQ14160 1630 aa28.05■■■□□ 2.08
DDX41-206ENST00000506965 SHROOM4Q9ULL8 1493 aa27.95■■■□□ 2.06
DDX41-206ENST00000506965 CC2D2AQ9P2K1 1620 aa27.89■■■□□ 2.06
DDX41-206ENST00000506965 EIF4G1Q04637 1599 aaKnown RBP27.8■■■□□ 2.04
DDX41-206ENST00000506965 CECR2Q9BXF3 1484 aa27.74■■■□□ 2.03
DDX41-206ENST00000506965 NCAPD3P42695 1498 aa26.81■■□□□ 1.88
DDX41-206ENST00000506965 ATAD2BQ9ULI0 1458 aa26.75■■□□□ 1.87
DDX41-206ENST00000506965 SMARCA4P51532 1647 aa26.75■■□□□ 1.87
DDX41-206ENST00000506965 DNAJC5Q9H3Z4 198 aa26.64■■□□□ 1.86
DDX41-206ENST00000506965 HMGXB3Q12766 1538 aa26.63■■□□□ 1.85
DDX41-206ENST00000506965 SMARCA2P51531 1590 aa26.59■■□□□ 1.85
DDX41-206ENST00000506965 NESP48681 1621 aa26.54■■□□□ 1.84
DDX41-206ENST00000506965 CUX2O14529 1486 aa26.53■■□□□ 1.84
DDX41-206ENST00000506965 BAZ1AQ9NRL2 1556 aaPredicted RBP26.5■■□□□ 1.83
DDX41-206ENST00000506965 ERCC6Q03468 1493 aa26.49■■□□□ 1.83
DDX41-206ENST00000506965 PEG3Q9GZU2 1588 aa26.48■■□□□ 1.83
DDX41-206ENST00000506965 MROH2BQ7Z745 1585 aa26.42■■□□□ 1.82
DDX41-206ENST00000506965 BAZ1BQ9UIG0 1483 aaKnown RBP26.42■■□□□ 1.82
DDX41-206ENST00000506965 THOC2Q8NI27 1593 aaKnown RBP26.32■■□□□ 1.8
DDX41-206ENST00000506965 KIF21AQ7Z4S6 1674 aa26.25■■□□□ 1.79
DDX41-206ENST00000506965 LAMC3Q9Y6N6 1575 aa26.22■■□□□ 1.79
DDX41-206ENST00000506965 WIZO95785 1651 aa26.14■■□□□ 1.78
DDX41-206ENST00000506965 PDS5BQ9NTI5 1447 aa25.96■■□□□ 1.75
DDX41-206ENST00000506965 CADPSQ9ULU8 1353 aa25.95■■□□□ 1.74
DDX41-206ENST00000506965 WDR62O43379 1518 aa25.85■■□□□ 1.73
DDX41-206ENST00000506965 MRC2Q9UBG0 1479 aa25.85■■□□□ 1.73
DDX41-206ENST00000506965 RSF1Q96T23 1441 aaPredicted RBP25.78■■□□□ 1.72
DDX41-206ENST00000506965 CEP164Q9UPV0 1460 aa25.7■■□□□ 1.7
DDX41-206ENST00000506965 TOP2AP11388 1531 aaKnown RBP25.69■■□□□ 1.7
DDX41-206ENST00000506965 CFTRP13569 1480 aa25.69■■□□□ 1.7
DDX41-206ENST00000506965 FANCD2Q9BXW9 1451 aa25.69■■□□□ 1.7
DDX41-206ENST00000506965 URB2Q14146 1524 aaKnown RBP25.58■■□□□ 1.69
DDX41-206ENST00000506965 PRDM2Q13029 1718 aa25.55■■□□□ 1.68
DDX41-206ENST00000506965 CCDC88BA6NC98 1476 aa25.41■■□□□ 1.66
DDX41-206ENST00000506965 TRIM41Q8WV44 630 aa25.38■■□□□ 1.65
DDX41-206ENST00000506965 ZNF608Q9ULD9 1512 aaPredicted RBP25.29■■□□□ 1.64
DDX41-206ENST00000506965 TOPBP1Q92547 1522 aa25.24■■□□□ 1.63
DDX41-206ENST00000506965 OSCARQ8IYS5 282 aa25.21■■□□□ 1.63
DDX41-206ENST00000506965 IFT140Q96RY7 1462 aa25.17■■□□□ 1.62
DDX41-206ENST00000506965 EIF4G3O43432 1585 aaKnown RBP25.14■■□□□ 1.61
DDX41-206ENST00000506965 RIMBP3CA6NJZ7 1639 aa25.12■■□□□ 1.61
DDX41-206ENST00000506965 RIMBP3BA6NNM3 1639 aa25.12■■□□□ 1.61
DDX41-206ENST00000506965 RIMBP3Q9UFD9 1639 aa25.12■■□□□ 1.61
DDX41-206ENST00000506965 DNMBPQ6XZF7 1577 aa25.12■■□□□ 1.61
DDX41-206ENST00000506965 TARBP1Q13395 1621 aaKnown RBP25.11■■□□□ 1.61
DDX41-206ENST00000506965 CHD1O14646 1710 aa25.03■■□□□ 1.6
DDX41-206ENST00000506965 ABCC8Q09428 1581 aa25.01■■□□□ 1.59
DDX41-206ENST00000506965 ARHGEF11O15085 1522 aa24.98■■□□□ 1.59
DDX41-206ENST00000506965 AQRO60306 1485 aaKnown RBP eCLIP24.98■■□□□ 1.596e-11■■■■■ 93.1
DDX41-206ENST00000506965 POLA1P09884 1462 aaPredicted RBP24.98■■□□□ 1.59
DDX41-206ENST00000506965 RAD54L2Q9Y4B4 1467 aa24.91■■□□□ 1.58
DDX41-206ENST00000506965 CUX1P39880 1505 aa24.82■■□□□ 1.56
DDX41-206ENST00000506965 FGD5Q6ZNL6 1462 aa24.8■■□□□ 1.56
DDX41-206ENST00000506965 TDRD9Q8NDG6 1382 aaKnown RBP24.78■■□□□ 1.56
DDX41-206ENST00000506965 ARAP1Q96P48 1450 aa24.77■■□□□ 1.56
DDX41-206ENST00000506965 SOGA1O94964 1423 aa24.77■■□□□ 1.56
DDX41-206ENST00000506965 WDR97A6NE52 1622 aa24.76■■□□□ 1.55
DDX41-206ENST00000506965 SNAPC4Q5SXM2 1469 aa24.71■■□□□ 1.55
DDX41-206ENST00000506965 CLASP1Q7Z460 1538 aa24.69■■□□□ 1.54
DDX41-206ENST00000506965 CYB5RLQ6IPT4 315 aa24.68■■□□□ 1.54
DDX41-206ENST00000506965 FBLN2P98095 1184 aa24.66■■□□□ 1.54
DDX41-206ENST00000506965 PBRM1Q86U86 1689 aa24.63■■□□□ 1.53
DDX41-206ENST00000506965 MAGI1Q96QZ7 1491 aaPredicted RBP24.58■■□□□ 1.53
DDX41-206ENST00000506965 GRIN2BQ13224 1484 aa24.57■■□□□ 1.52
DDX41-206ENST00000506965 ABCA5Q8WWZ7 1642 aa24.55■■□□□ 1.52
DDX41-206ENST00000506965 SYNJ1O43426 1573 aa24.53■■□□□ 1.52
DDX41-206ENST00000506965 SYNJ2O15056 1496 aa24.52■■□□□ 1.52
DDX41-206ENST00000506965 GAPVD1Q14C86 1478 aa24.49■■□□□ 1.51
DDX41-206ENST00000506965 ABCA10Q8WWZ4 1543 aa24.49■■□□□ 1.51
DDX41-206ENST00000506965 CHMP7Q8WUX9 453 aaPredicted RBP24.45■■□□□ 1.5
DDX41-206ENST00000506965 SUPT5HO00267 1087 aaKnown RBP24.42■■□□□ 1.5
DDX41-206ENST00000506965 BIVM-ERCC5R4GMW8 1640 aa24.4■■□□□ 1.5
DDX41-206ENST00000506965 ERCC6L2Q5T890 1561 aa24.38■■□□□ 1.49
DDX41-206ENST00000506965 TOP2BQ02880 1626 aa24.35■■□□□ 1.49
DDX41-206ENST00000506965 ADAMTS12P58397 1594 aa24.35■■□□□ 1.49
DDX41-206ENST00000506965 TRHP20396 242 aaPredicted RBP24.35■■□□□ 1.49
DDX41-206ENST00000506965 CEP170Q5SW79 1584 aa24.33■■□□□ 1.48
DDX41-206ENST00000506965 GRIN2AQ12879 1464 aa24.31■■□□□ 1.48
DDX41-206ENST00000506965 WRNQ14191 1432 aaPredicted RBP eCLIP24.27■■□□□ 1.48
DDX41-206ENST00000506965 NUP160Q12769 1436 aa24.25■■□□□ 1.47
DDX41-206ENST00000506965 SHROOM2Q13796 1616 aa24.23■■□□□ 1.47
DDX41-206ENST00000506965 ERICH3Q5RHP9 1530 aa24.15■■□□□ 1.46
DDX41-206ENST00000506965 FHAD1B1AJZ9 1412 aa24.14■■□□□ 1.45
DDX41-206ENST00000506965 RUSC2Q8N2Y8 1516 aa24.03■■□□□ 1.44
DDX41-206ENST00000506965 KIF13AQ9H1H9 1805 aa24.03■■□□□ 1.44
DDX41-206ENST00000506965 PRG4Q92954 1404 aaPredicted RBP23.96■■□□□ 1.43
DDX41-206ENST00000506965 JPH4Q96JJ6 628 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms