RNA–Protein interactions for RNA: ENST00000374491.3

EDEM2-201, Transcript of ER degradation enhancing alpha-mannosidase like protein 2, humanhuman

TSL 1 (best) BASIC

Gene EDEM2, Length 1,756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM2-201ENST00000374491 NISCHQ9Y2I1 1504 aa31.8■■■□□ 2.68
EDEM2-201ENST00000374491 CCDC180Q9P1Z9 1646 aa28.38■■■□□ 2.13
EDEM2-201ENST00000374491 ABCC9O60706 1549 aa28.11■■■□□ 2.09
EDEM2-201ENST00000374491 RB1CC1Q8TDY2 1594 aa26.92■■□□□ 1.9
EDEM2-201ENST00000374491 NACADO15069 1562 aa26.81■■□□□ 1.88
EDEM2-201ENST00000374491 DCAF8L2P0C7V8 631 aa26.76■■□□□ 1.87
EDEM2-201ENST00000374491 MYO15BQ96JP2 1530 aa26.56■■□□□ 1.84
EDEM2-201ENST00000374491 ZCCHC6Q5VYS8 1495 aaKnown RBP26.39■■□□□ 1.81
EDEM2-201ENST00000374491 DCAF1Q9Y4B6 1507 aa26.31■■□□□ 1.8
EDEM2-201ENST00000374491 PABPN1Q86U42 306 aaKnown RBP eCLIP26.25■■□□□ 1.79
EDEM2-201ENST00000374491 UNC13AQ9UPW8 1703 aa26.21■■□□□ 1.79
EDEM2-201ENST00000374491 DNAJC5BQ9UF47 199 aa26.14■■□□□ 1.78
EDEM2-201ENST00000374491 BICRAQ9NZM4 1560 aa26.07■■□□□ 1.76
EDEM2-201ENST00000374491 SCRIBQ14160 1630 aa25.85■■□□□ 1.73
EDEM2-201ENST00000374491 SHROOM4Q9ULL8 1493 aa25.84■■□□□ 1.73
EDEM2-201ENST00000374491 EIF4G1Q04637 1599 aaKnown RBP25.42■■□□□ 1.66
EDEM2-201ENST00000374491 CC2D2AQ9P2K1 1620 aa25.4■■□□□ 1.66
EDEM2-201ENST00000374491 CECR2Q9BXF3 1484 aa25.32■■□□□ 1.64
EDEM2-201ENST00000374491 NCAPD3P42695 1498 aa24.77■■□□□ 1.56
EDEM2-201ENST00000374491 SMARCA4P51532 1647 aa24.71■■□□□ 1.55
EDEM2-201ENST00000374491 ATAD2BQ9ULI0 1458 aa24.71■■□□□ 1.55
EDEM2-201ENST00000374491 BAZ1AQ9NRL2 1556 aaPredicted RBP24.67■■□□□ 1.54
EDEM2-201ENST00000374491 SMARCA2P51531 1590 aa24.66■■□□□ 1.54
EDEM2-201ENST00000374491 HMGXB3Q12766 1538 aa24.57■■□□□ 1.52
EDEM2-201ENST00000374491 PEG3Q9GZU2 1588 aa24.5■■□□□ 1.51
EDEM2-201ENST00000374491 BAZ1BQ9UIG0 1483 aaKnown RBP24.48■■□□□ 1.51
EDEM2-201ENST00000374491 MROH2BQ7Z745 1585 aa24.47■■□□□ 1.51
EDEM2-201ENST00000374491 ERCC6Q03468 1493 aa24.28■■□□□ 1.48
EDEM2-201ENST00000374491 NESP48681 1621 aa24.21■■□□□ 1.47
EDEM2-201ENST00000374491 WIZO95785 1651 aa24.17■■□□□ 1.46
EDEM2-201ENST00000374491 CUX2O14529 1486 aa24.16■■□□□ 1.46
EDEM2-201ENST00000374491 LAMC3Q9Y6N6 1575 aa24.13■■□□□ 1.45
EDEM2-201ENST00000374491 RSF1Q96T23 1441 aaPredicted RBP24.11■■□□□ 1.45
EDEM2-201ENST00000374491 CADPSQ9ULU8 1353 aa24.03■■□□□ 1.44
EDEM2-201ENST00000374491 PDS5BQ9NTI5 1447 aa24.03■■□□□ 1.44
EDEM2-201ENST00000374491 TOP2AP11388 1531 aaKnown RBP23.92■■□□□ 1.42
EDEM2-201ENST00000374491 THOC2Q8NI27 1593 aaKnown RBP23.89■■□□□ 1.42
EDEM2-201ENST00000374491 KIF21AQ7Z4S6 1674 aa23.88■■□□□ 1.41
EDEM2-201ENST00000374491 DNAJC5Q9H3Z4 198 aa23.86■■□□□ 1.41
EDEM2-201ENST00000374491 CFTRP13569 1480 aa23.79■■□□□ 1.4
EDEM2-201ENST00000374491 MRC2Q9UBG0 1479 aa23.76■■□□□ 1.39
EDEM2-201ENST00000374491 FANCD2Q9BXW9 1451 aa23.73■■□□□ 1.39
EDEM2-201ENST00000374491 CEP164Q9UPV0 1460 aa23.73■■□□□ 1.39
EDEM2-201ENST00000374491 WDR62O43379 1518 aa23.67■■□□□ 1.38
EDEM2-201ENST00000374491 CCDC88BA6NC98 1476 aa23.66■■□□□ 1.38
EDEM2-201ENST00000374491 PRDM2Q13029 1718 aa23.5■■□□□ 1.35
EDEM2-201ENST00000374491 URB2Q14146 1524 aaKnown RBP23.49■■□□□ 1.35
EDEM2-201ENST00000374491 ABCC8Q09428 1581 aa23.34■■□□□ 1.33
EDEM2-201ENST00000374491 TOPBP1Q92547 1522 aa23.3■■□□□ 1.32
EDEM2-201ENST00000374491 SUPT5HO00267 1087 aaKnown RBP23.27■■□□□ 1.32
EDEM2-201ENST00000374491 IFT140Q96RY7 1462 aa23.26■■□□□ 1.31
EDEM2-201ENST00000374491 DNMBPQ6XZF7 1577 aa23.23■■□□□ 1.31
EDEM2-201ENST00000374491 OSCARQ8IYS5 282 aa23.16■■□□□ 1.3
EDEM2-201ENST00000374491 ZNF608Q9ULD9 1512 aaPredicted RBP23.14■■□□□ 1.29
EDEM2-201ENST00000374491 POLA1P09884 1462 aaPredicted RBP23.07■■□□□ 1.28
EDEM2-201ENST00000374491 TARBP1Q13395 1621 aaKnown RBP23.05■■□□□ 1.28
EDEM2-201ENST00000374491 SOGA1O94964 1423 aa23.02■■□□□ 1.27
EDEM2-201ENST00000374491 EIF4G3O43432 1585 aaKnown RBP23■■□□□ 1.27
EDEM2-201ENST00000374491 AQRO60306 1485 aaKnown RBP eCLIP23■■□□□ 1.273e-10■■■■■ 43
EDEM2-201ENST00000374491 CUX1P39880 1505 aa22.98■■□□□ 1.27
EDEM2-201ENST00000374491 RAD54L2Q9Y4B4 1467 aa22.97■■□□□ 1.27
EDEM2-201ENST00000374491 FGD5Q6ZNL6 1462 aa22.97■■□□□ 1.27
EDEM2-201ENST00000374491 TDRD9Q8NDG6 1382 aaKnown RBP22.91■■□□□ 1.26
EDEM2-201ENST00000374491 TRIM41Q8WV44 630 aa22.89■■□□□ 1.25
EDEM2-201ENST00000374491 WDR97A6NE52 1622 aa22.88■■□□□ 1.25
EDEM2-201ENST00000374491 FBLN2P98095 1184 aa22.83■■□□□ 1.24
EDEM2-201ENST00000374491 GRIN2BQ13224 1484 aa22.78■■□□□ 1.24
EDEM2-201ENST00000374491 CHD1O14646 1710 aa22.77■■□□□ 1.24
EDEM2-201ENST00000374491 SNAPC4Q5SXM2 1469 aa22.76■■□□□ 1.23
EDEM2-201ENST00000374491 ABCA10Q8WWZ4 1543 aa22.75■■□□□ 1.23
EDEM2-201ENST00000374491 WRNQ14191 1432 aaPredicted RBP eCLIP22.75■■□□□ 1.23
EDEM2-201ENST00000374491 MAGI1Q96QZ7 1491 aaPredicted RBP22.74■■□□□ 1.23
EDEM2-201ENST00000374491 CHMP7Q8WUX9 453 aaPredicted RBP22.73■■□□□ 1.23
EDEM2-201ENST00000374491 GAPVD1Q14C86 1478 aa22.73■■□□□ 1.23
EDEM2-201ENST00000374491 RIMBP3CA6NJZ7 1639 aa22.71■■□□□ 1.23
EDEM2-201ENST00000374491 RIMBP3BA6NNM3 1639 aa22.71■■□□□ 1.23
EDEM2-201ENST00000374491 RIMBP3Q9UFD9 1639 aa22.71■■□□□ 1.23
EDEM2-201ENST00000374491 TOP2BQ02880 1626 aa22.7■■□□□ 1.22
EDEM2-201ENST00000374491 ARHGEF11O15085 1522 aa22.69■■□□□ 1.22
EDEM2-201ENST00000374491 BIVM-ERCC5R4GMW8 1640 aa22.68■■□□□ 1.22
EDEM2-201ENST00000374491 SYNJ2O15056 1496 aa22.66■■□□□ 1.22
EDEM2-201ENST00000374491 SYNJ1O43426 1573 aa22.64■■□□□ 1.22
EDEM2-201ENST00000374491 ABCA5Q8WWZ7 1642 aa22.63■■□□□ 1.21
EDEM2-201ENST00000374491 PBRM1Q86U86 1689 aa22.62■■□□□ 1.21
EDEM2-201ENST00000374491 CYB5RLQ6IPT4 315 aa22.56■■□□□ 1.2
EDEM2-201ENST00000374491 CLASP1Q7Z460 1538 aa22.56■■□□□ 1.2
EDEM2-201ENST00000374491 ARAP1Q96P48 1450 aa22.48■■□□□ 1.19
EDEM2-201ENST00000374491 ERICH3Q5RHP9 1530 aa22.47■■□□□ 1.19
EDEM2-201ENST00000374491 FHAD1B1AJZ9 1412 aa22.46■■□□□ 1.19
EDEM2-201ENST00000374491 GRIN2AQ12879 1464 aa22.46■■□□□ 1.19
EDEM2-201ENST00000374491 ADAMTS12P58397 1594 aa22.45■■□□□ 1.18
EDEM2-201ENST00000374491 NUP160Q12769 1436 aa22.39■■□□□ 1.17
EDEM2-201ENST00000374491 CEP170Q5SW79 1584 aa22.33■■□□□ 1.17
EDEM2-201ENST00000374491 KIF27Q86VH2 1401 aa22.31■■□□□ 1.16
EDEM2-201ENST00000374491 IGF1RP08069 1367 aa22.28■■□□□ 1.16
EDEM2-201ENST00000374491 TRHP20396 242 aaPredicted RBP22.22■■□□□ 1.15
EDEM2-201ENST00000374491 SHROOM2Q13796 1616 aa22.22■■□□□ 1.15
EDEM2-201ENST00000374491 JPH4Q96JJ6 628 aa22.21■■□□□ 1.15
EDEM2-201ENST00000374491 ERCC6L2Q5T890 1561 aa22.19■■□□□ 1.14
EDEM2-201ENST00000374491 CUL7Q14999 1698 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms