RNA–Protein interactions for RNA: ENST00000494424.1

TSPAN6-202, Transcript of tetraspanin 6, humanhuman

TSL 2

Gene TSPAN6, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6-202ENST00000494424 AEBP2Q6ZN18 517 aaPredicted RBP21.08■□□□□ 0.97
TSPAN6-202ENST00000494424 CHIC1Q5VXU3 224 aa20.62■□□□□ 0.89
TSPAN6-202ENST00000494424 SENP3Q9H4L4 574 aaPredicted RBP18.09■□□□□ 0.49
TSPAN6-202ENST00000494424 PHF23Q9BUL5 403 aaPredicted RBP18.01■□□□□ 0.47
TSPAN6-202ENST00000494424 PLPPR3Q6T4P5 718 aa16.77■□□□□ 0.28
TSPAN6-202ENST00000494424 FOXD1Q16676 465 aa16.67■□□□□ 0.26
TSPAN6-202ENST00000494424 NISCHQ9Y2I1 1504 aa16.61■□□□□ 0.25
TSPAN6-202ENST00000494424 ABCC9O60706 1549 aa16.32■□□□□ 0.2
TSPAN6-202ENST00000494424 DNAJC5BQ9UF47 199 aa16.24■□□□□ 0.19
TSPAN6-202ENST00000494424 ADRA2BP18089 450 aa15.9■□□□□ 0.14
TSPAN6-202ENST00000494424 PPP6R1Q9UPN7 881 aa15.9■□□□□ 0.14
TSPAN6-202ENST00000494424 DNAJC5Q9H3Z4 198 aa15.77■□□□□ 0.12
TSPAN6-202ENST00000494424 PIAS4Q8N2W9 510 aaPredicted RBP15.76■□□□□ 0.11
TSPAN6-202ENST00000494424 MSH5O43196 834 aa15.57■□□□□ 0.08
TSPAN6-202ENST00000494424 CCDC180Q9P1Z9 1646 aa15.36■□□□□ 0.05
TSPAN6-202ENST00000494424 RB1CC1Q8TDY2 1594 aa15.15■□□□□ 0.02
TSPAN6-202ENST00000494424 PABPN1Q86U42 306 aaKnown RBP eCLIP15.03■□□□□ -0
TSPAN6-202ENST00000494424 CECR2Q9BXF3 1484 aa14.87□□□□□ -0.03
TSPAN6-202ENST00000494424 NACADO15069 1562 aa14.81□□□□□ -0.04
TSPAN6-202ENST00000494424 SCAF1Q9H7N4 1312 aaKnown RBP14.77□□□□□ -0.04
TSPAN6-202ENST00000494424 CC2D2AQ9P2K1 1620 aa14.7□□□□□ -0.06
TSPAN6-202ENST00000494424 BICRAQ9NZM4 1560 aa14.68□□□□□ -0.06
TSPAN6-202ENST00000494424 PPP4R3CPQ6ZMV5 832 aa14.68□□□□□ -0.06
TSPAN6-202ENST00000494424 UNC13AQ9UPW8 1703 aa14.66□□□□□ -0.06
TSPAN6-202ENST00000494424 CUX2O14529 1486 aa14.61□□□□□ -0.07
TSPAN6-202ENST00000494424 TRIM41Q8WV44 630 aa14.56□□□□□ -0.08
TSPAN6-202ENST00000494424 SHROOM4Q9ULL8 1493 aa14.54□□□□□ -0.08
TSPAN6-202ENST00000494424 EIF4G1Q04637 1599 aaKnown RBP14.43□□□□□ -0.1
TSPAN6-202ENST00000494424 DCAF8L2P0C7V8 631 aa14.43□□□□□ -0.1
TSPAN6-202ENST00000494424 MAPK8IP2Q13387 824 aaPredicted RBP14.42□□□□□ -0.1
TSPAN6-202ENST00000494424 NCBP3Q53F19 620 aaKnown RBP14.39□□□□□ -0.11
TSPAN6-202ENST00000494424 DMRT2Q9Y5R5 561 aa14.38□□□□□ -0.11
TSPAN6-202ENST00000494424 CNKSR2Q8WXI2 1034 aa14.36□□□□□ -0.11
TSPAN6-202ENST00000494424 MYO15BQ96JP2 1530 aa14.32□□□□□ -0.12
TSPAN6-202ENST00000494424 ERCC6Q03468 1493 aa14.22□□□□□ -0.13
TSPAN6-202ENST00000494424 POTEDQ86YR6 584 aa14.21□□□□□ -0.13
TSPAN6-202ENST00000494424 KCNA4P22459 653 aa14.18□□□□□ -0.14
TSPAN6-202ENST00000494424 RNF216Q9NWF9 866 aaPredicted RBP14.11□□□□□ -0.15
TSPAN6-202ENST00000494424 HOXD11P31277 338 aaPredicted RBP14.05□□□□□ -0.16
TSPAN6-202ENST00000494424 NPM3O75607 178 aaKnown RBP14.04□□□□□ -0.16
TSPAN6-202ENST00000494424 SCRIBQ14160 1630 aa13.92□□□□□ -0.18
TSPAN6-202ENST00000494424 THOC2Q8NI27 1593 aaKnown RBP13.8□□□□□ -0.2
TSPAN6-202ENST00000494424 OSCARQ8IYS5 282 aa13.76□□□□□ -0.21
TSPAN6-202ENST00000494424 DCAF8L1A6NGE4 600 aa13.73□□□□□ -0.21
TSPAN6-202ENST00000494424 DCAF1Q9Y4B6 1507 aa13.73□□□□□ -0.21
TSPAN6-202ENST00000494424 NCAPD3P42695 1498 aa13.7□□□□□ -0.22
TSPAN6-202ENST00000494424 NESP48681 1621 aa13.7□□□□□ -0.22
TSPAN6-202ENST00000494424 BAZ1AQ9NRL2 1556 aaPredicted RBP13.65□□□□□ -0.22
TSPAN6-202ENST00000494424 TRHP20396 242 aaPredicted RBP13.64□□□□□ -0.23
TSPAN6-202ENST00000494424 ILDR1Q86SU0 546 aaPredicted RBP13.63□□□□□ -0.23
TSPAN6-202ENST00000494424 RIMBP3CA6NJZ7 1639 aa13.6□□□□□ -0.23
TSPAN6-202ENST00000494424 RIMBP3BA6NNM3 1639 aa13.6□□□□□ -0.23
TSPAN6-202ENST00000494424 RIMBP3Q9UFD9 1639 aa13.6□□□□□ -0.23
TSPAN6-202ENST00000494424 SMARCA2P51531 1590 aa13.58□□□□□ -0.23
TSPAN6-202ENST00000494424 SLC4A1APQ9BWU0 796 aaKnown RBP13.55□□□□□ -0.24
TSPAN6-202ENST00000494424 ZCCHC6Q5VYS8 1495 aaKnown RBP13.54□□□□□ -0.24
TSPAN6-202ENST00000494424 PDS5BQ9NTI5 1447 aa13.53□□□□□ -0.24
TSPAN6-202ENST00000494424 LAMC3Q9Y6N6 1575 aa13.53□□□□□ -0.24
TSPAN6-202ENST00000494424 ARHGEF11O15085 1522 aa13.48□□□□□ -0.25
TSPAN6-202ENST00000494424 HMGXB3Q12766 1538 aa13.48□□□□□ -0.25
TSPAN6-202ENST00000494424 ATAD2BQ9ULI0 1458 aa13.47□□□□□ -0.25
TSPAN6-202ENST00000494424 KIF21AQ7Z4S6 1674 aa13.46□□□□□ -0.26
TSPAN6-202ENST00000494424 CYB5RLQ6IPT4 315 aa13.45□□□□□ -0.26
TSPAN6-202ENST00000494424 MRC2Q9UBG0 1479 aa13.42□□□□□ -0.26
TSPAN6-202ENST00000494424 WDR62O43379 1518 aa13.42□□□□□ -0.26
TSPAN6-202ENST00000494424 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.4□□□□□ -0.26
TSPAN6-202ENST00000494424 BAZ1BQ9UIG0 1483 aaKnown RBP13.28□□□□□ -0.28
TSPAN6-202ENST00000494424 ARAP1Q96P48 1450 aa13.27□□□□□ -0.29
TSPAN6-202ENST00000494424 SLC4A2P04920 1241 aa13.25□□□□□ -0.29
TSPAN6-202ENST00000494424 RNF39Q9H2S5 420 aa13.25□□□□□ -0.29
TSPAN6-202ENST00000494424 CADPSQ9ULU8 1353 aa13.22□□□□□ -0.29
TSPAN6-202ENST00000494424 FOXD4L1Q9NU39 408 aa13.18□□□□□ -0.3
TSPAN6-202ENST00000494424 C1QBPQ07021 282 aaKnown RBP13.16□□□□□ -0.3
TSPAN6-202ENST00000494424 CEP164Q9UPV0 1460 aa13.16□□□□□ -0.3
TSPAN6-202ENST00000494424 SMARCA4P51532 1647 aa13.15□□□□□ -0.3
TSPAN6-202ENST00000494424 RSF1Q96T23 1441 aaPredicted RBP13.14□□□□□ -0.31
TSPAN6-202ENST00000494424 U3KPZ7 1027 aaPredicted RBP13.11□□□□□ -0.31
TSPAN6-202ENST00000494424 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.1□□□□□ -0.31
TSPAN6-202ENST00000494424 HNRNPUL2Q1KMD3 747 aaKnown RBP13.1□□□□□ -0.31
TSPAN6-202ENST00000494424 PEG3Q9GZU2 1588 aa13.08□□□□□ -0.32
TSPAN6-202ENST00000494424 MYCNP04198 464 aaPredicted RBP13.07□□□□□ -0.32
TSPAN6-202ENST00000494424 FANCD2Q9BXW9 1451 aa13.04□□□□□ -0.32
TSPAN6-202ENST00000494424 APLP2Q06481 763 aa13.03□□□□□ -0.32
TSPAN6-202ENST00000494424 SAMD1Q6SPF0 538 aaPredicted RBP13□□□□□ -0.33
TSPAN6-202ENST00000494424 ZBTB22O15209 634 aa12.99□□□□□ -0.33
TSPAN6-202ENST00000494424 CACNB1Q02641 598 aaPredicted RBP12.98□□□□□ -0.33
TSPAN6-202ENST00000494424 FBXO41Q8TF61 875 aa12.97□□□□□ -0.33
TSPAN6-202ENST00000494424 EHMT2Q96KQ7 1210 aa12.97□□□□□ -0.33
TSPAN6-202ENST00000494424 URB2Q14146 1524 aaKnown RBP12.97□□□□□ -0.33
TSPAN6-202ENST00000494424 KDM4FA0A1W2PPD8 638 aa12.96□□□□□ -0.33
TSPAN6-202ENST00000494424 ZNF608Q9ULD9 1512 aaPredicted RBP12.96□□□□□ -0.33
TSPAN6-202ENST00000494424 IFT140Q96RY7 1462 aa12.96□□□□□ -0.34
TSPAN6-202ENST00000494424 LMTK3Q96Q04 1460 aa12.91□□□□□ -0.34
TSPAN6-202ENST00000494424 ERCC6L2Q5T890 1561 aa12.9□□□□□ -0.34
TSPAN6-202ENST00000494424 CHD1O14646 1710 aa12.89□□□□□ -0.35
TSPAN6-202ENST00000494424 SOCS7O14512 581 aa12.89□□□□□ -0.35
TSPAN6-202ENST00000494424 CSRNP3Q8WYN3 585 aa12.88□□□□□ -0.35
TSPAN6-202ENST00000494424 FBLN2P98095 1184 aa12.87□□□□□ -0.35
TSPAN6-202ENST00000494424 CFTRP13569 1480 aa12.85□□□□□ -0.35
TSPAN6-202ENST00000494424 EIF4G3O43432 1585 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms