RNA–Protein interactions for RNA: ENST00000475662.5

CENPA-206, Transcript of centromere protein A, humanhuman

TSL 2

Gene CENPA, Length 1,208 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPA-206ENST00000475662 NISCHQ9Y2I1 1504 aa38.56■■■■□ 3.76
CENPA-206ENST00000475662 ABCC9O60706 1549 aa35.36■■■■□ 3.25
CENPA-206ENST00000475662 CCDC180Q9P1Z9 1646 aa34.73■■■■□ 3.15
CENPA-206ENST00000475662 DNAJC5BQ9UF47 199 aa33.69■■■□□ 2.98
CENPA-206ENST00000475662 RB1CC1Q8TDY2 1594 aa33.37■■■□□ 2.93
CENPA-206ENST00000475662 NACADO15069 1562 aa33.02■■■□□ 2.88
CENPA-206ENST00000475662 PABPN1Q86U42 306 aaKnown RBP eCLIP32.88■■■□□ 2.85
CENPA-206ENST00000475662 DCAF8L2P0C7V8 631 aa32.82■■■□□ 2.84
CENPA-206ENST00000475662 UNC13AQ9UPW8 1703 aa32.5■■■□□ 2.79
CENPA-206ENST00000475662 BICRAQ9NZM4 1560 aa32.44■■■□□ 2.78
CENPA-206ENST00000475662 MYO15BQ96JP2 1530 aa32.41■■■□□ 2.78
CENPA-206ENST00000475662 SHROOM4Q9ULL8 1493 aa31.94■■■□□ 2.7
CENPA-206ENST00000475662 CECR2Q9BXF3 1484 aa31.91■■■□□ 2.7
CENPA-206ENST00000475662 CC2D2AQ9P2K1 1620 aa31.86■■■□□ 2.69
CENPA-206ENST00000475662 ZCCHC6Q5VYS8 1495 aaKnown RBP31.85■■■□□ 2.69
CENPA-206ENST00000475662 DCAF1Q9Y4B6 1507 aa31.8■■■□□ 2.68
CENPA-206ENST00000475662 EIF4G1Q04637 1599 aaKnown RBP31.68■■■□□ 2.66
CENPA-206ENST00000475662 SCRIBQ14160 1630 aa31.67■■■□□ 2.66
CENPA-206ENST00000475662 DNAJC5Q9H3Z4 198 aa31.29■■■□□ 2.6
CENPA-206ENST00000475662 CUX2O14529 1486 aa30.67■■■□□ 2.5
CENPA-206ENST00000475662 ERCC6Q03468 1493 aa30.55■■■□□ 2.48
CENPA-206ENST00000475662 NCAPD3P42695 1498 aa30.54■■■□□ 2.48
CENPA-206ENST00000475662 ATAD2BQ9ULI0 1458 aa30.38■■■□□ 2.45
CENPA-206ENST00000475662 NESP48681 1621 aa30.23■■■□□ 2.43
CENPA-206ENST00000475662 HMGXB3Q12766 1538 aa30.22■■■□□ 2.43
CENPA-206ENST00000475662 SMARCA2P51531 1590 aa30.21■■■□□ 2.43
CENPA-206ENST00000475662 SMARCA4P51532 1647 aa30.16■■■□□ 2.42
CENPA-206ENST00000475662 BAZ1BQ9UIG0 1483 aaKnown RBP30.03■■■□□ 2.4
CENPA-206ENST00000475662 THOC2Q8NI27 1593 aaKnown RBP29.97■■■□□ 2.39
CENPA-206ENST00000475662 BAZ1AQ9NRL2 1556 aaPredicted RBP29.94■■■□□ 2.38
CENPA-206ENST00000475662 LAMC3Q9Y6N6 1575 aa29.88■■■□□ 2.37
CENPA-206ENST00000475662 PEG3Q9GZU2 1588 aa29.87■■■□□ 2.37
CENPA-206ENST00000475662 PDS5BQ9NTI5 1447 aa29.78■■■□□ 2.36
CENPA-206ENST00000475662 MROH2BQ7Z745 1585 aa29.72■■■□□ 2.35
CENPA-206ENST00000475662 KIF21AQ7Z4S6 1674 aa29.71■■■□□ 2.35
CENPA-206ENST00000475662 TRIM41Q8WV44 630 aa29.7■■■□□ 2.35
CENPA-206ENST00000475662 CADPSQ9ULU8 1353 aa29.6■■■□□ 2.33
CENPA-206ENST00000475662 MRC2Q9UBG0 1479 aa29.54■■■□□ 2.32
CENPA-206ENST00000475662 WDR62O43379 1518 aa29.46■■■□□ 2.31
CENPA-206ENST00000475662 CEP164Q9UPV0 1460 aa29.31■■■□□ 2.28
CENPA-206ENST00000475662 WIZO95785 1651 aa29.28■■■□□ 2.28
CENPA-206ENST00000475662 FANCD2Q9BXW9 1451 aa29.24■■■□□ 2.27
CENPA-206ENST00000475662 OSCARQ8IYS5 282 aa29.22■■■□□ 2.27
CENPA-206ENST00000475662 CFTRP13569 1480 aa29.14■■■□□ 2.26
CENPA-206ENST00000475662 URB2Q14146 1524 aaKnown RBP29.04■■■□□ 2.24
CENPA-206ENST00000475662 RSF1Q96T23 1441 aaPredicted RBP28.94■■■□□ 2.22
CENPA-206ENST00000475662 TOP2AP11388 1531 aaKnown RBP28.9■■■□□ 2.22
CENPA-206ENST00000475662 RIMBP3CA6NJZ7 1639 aa28.83■■■□□ 2.21
CENPA-206ENST00000475662 RIMBP3BA6NNM3 1639 aa28.83■■■□□ 2.21
CENPA-206ENST00000475662 RIMBP3Q9UFD9 1639 aa28.83■■■□□ 2.21
CENPA-206ENST00000475662 ZNF608Q9ULD9 1512 aaPredicted RBP28.79■■■□□ 2.2
CENPA-206ENST00000475662 IFT140Q96RY7 1462 aa28.76■■■□□ 2.19
CENPA-206ENST00000475662 ARHGEF11O15085 1522 aa28.72■■■□□ 2.19
CENPA-206ENST00000475662 TOPBP1Q92547 1522 aa28.63■■■□□ 2.17
CENPA-206ENST00000475662 PRDM2Q13029 1718 aa28.62■■■□□ 2.17
CENPA-206ENST00000475662 CCDC88BA6NC98 1476 aa28.61■■■□□ 2.17
CENPA-206ENST00000475662 CYB5RLQ6IPT4 315 aa28.58■■■□□ 2.17
CENPA-206ENST00000475662 EIF4G3O43432 1585 aaKnown RBP28.54■■■□□ 2.16
CENPA-206ENST00000475662 ABCC8Q09428 1581 aa28.5■■■□□ 2.15
CENPA-206ENST00000475662 AQRO60306 1485 aaKnown RBP eCLIP28.46■■■□□ 2.151e-6■■■■■ 27.5
CENPA-206ENST00000475662 DNMBPQ6XZF7 1577 aa28.45■■■□□ 2.14
CENPA-206ENST00000475662 ARAP1Q96P48 1450 aa28.42■■■□□ 2.14
CENPA-206ENST00000475662 TRHP20396 242 aaPredicted RBP28.42■■■□□ 2.14
CENPA-206ENST00000475662 FBLN2P98095 1184 aa28.38■■■□□ 2.13
CENPA-206ENST00000475662 TARBP1Q13395 1621 aaKnown RBP28.38■■■□□ 2.13
CENPA-206ENST00000475662 CHD1O14646 1710 aa28.36■■■□□ 2.13
CENPA-206ENST00000475662 POLA1P09884 1462 aaPredicted RBP28.31■■■□□ 2.12
CENPA-206ENST00000475662 RAD54L2Q9Y4B4 1467 aa28.23■■■□□ 2.11
CENPA-206ENST00000475662 TDRD9Q8NDG6 1382 aaKnown RBP28.22■■■□□ 2.11
CENPA-206ENST00000475662 SOGA1O94964 1423 aa28.18■■■□□ 2.1
CENPA-206ENST00000475662 SNAPC4Q5SXM2 1469 aa28.14■■■□□ 2.09
CENPA-206ENST00000475662 CLASP1Q7Z460 1538 aa28.11■■■□□ 2.09
CENPA-206ENST00000475662 CHMP7Q8WUX9 453 aaPredicted RBP28.09■■■□□ 2.09
CENPA-206ENST00000475662 FGD5Q6ZNL6 1462 aa28.06■■■□□ 2.08
CENPA-206ENST00000475662 WDR97A6NE52 1622 aa28.03■■■□□ 2.08
CENPA-206ENST00000475662 SYNJ1O43426 1573 aa28.03■■■□□ 2.08
CENPA-206ENST00000475662 MAGI1Q96QZ7 1491 aaPredicted RBP28.02■■■□□ 2.08
CENPA-206ENST00000475662 GRIN2BQ13224 1484 aa27.99■■■□□ 2.07
CENPA-206ENST00000475662 AEBP2Q6ZN18 517 aaPredicted RBP27.96■■■□□ 2.07
CENPA-206ENST00000475662 SYNJ2O15056 1496 aa27.95■■■□□ 2.06
CENPA-206ENST00000475662 CUX1P39880 1505 aa27.94■■■□□ 2.06
CENPA-206ENST00000475662 GAPVD1Q14C86 1478 aa27.87■■■□□ 2.05
CENPA-206ENST00000475662 PBRM1Q86U86 1689 aa27.73■■■□□ 2.03
CENPA-206ENST00000475662 ABCA10Q8WWZ4 1543 aa27.7■■■□□ 2.02
CENPA-206ENST00000475662 ABCA5Q8WWZ7 1642 aa27.67■■■□□ 2.02
CENPA-206ENST00000475662 ERCC6L2Q5T890 1561 aa27.65■■■□□ 2.02
CENPA-206ENST00000475662 GRIN2AQ12879 1464 aa27.62■■■□□ 2.01
CENPA-206ENST00000475662 NUP160Q12769 1436 aa27.57■■■□□ 2
CENPA-206ENST00000475662 CEP170Q5SW79 1584 aa27.55■■■□□ 2
CENPA-206ENST00000475662 ADAMTS12P58397 1594 aa27.51■■□□□ 1.99
CENPA-206ENST00000475662 WRNQ14191 1432 aaPredicted RBP eCLIP27.5■■□□□ 1.99
CENPA-206ENST00000475662 FHAD1B1AJZ9 1412 aa27.46■■□□□ 1.99
CENPA-206ENST00000475662 SHROOM2Q13796 1616 aa27.44■■□□□ 1.98
CENPA-206ENST00000475662 PRG4Q92954 1404 aaPredicted RBP27.34■■□□□ 1.97
CENPA-206ENST00000475662 ERICH3Q5RHP9 1530 aa27.32■■□□□ 1.96
CENPA-206ENST00000475662 TOP2BQ02880 1626 aa27.32■■□□□ 1.96
CENPA-206ENST00000475662 JPH4Q96JJ6 628 aa27.3■■□□□ 1.96
CENPA-206ENST00000475662 BIVM-ERCC5R4GMW8 1640 aa27.3■■□□□ 1.96
CENPA-206ENST00000475662 KIF13AQ9H1H9 1805 aa27.3■■□□□ 1.96
CENPA-206ENST00000475662 SUPT5HO00267 1087 aaKnown RBP27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms