Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC28.68■■■□□ 2.181e-6■■■■□ 19.3
MATR3P43243 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC23.04■■□□□ 1.281e-6■■■■□ 19.3
MATR3P43243 L3MBTL4-208ENST00000583809 549 ntTSL 424.99■■□□□ 1.597e-7■■■■□ 19.3
MATR3P43243 L3MBTL4-206ENST00000581231 568 ntTSL 512.59□□□□□ -0.397e-7■■■■□ 19.3
MATR3P43243 LPP-208ENST00000448637 5835 ntTSL 5 BASIC9.84□□□□□ -0.839e-7■■■■□ 19.3
MATR3P43243 ATP1B3-206ENST00000482635 569 ntTSL 55.25□□□□□ -1.576e-7■■■■□ 19.3
MATR3P43243 LPP-209ENST00000454789 343 ntTSL 59.59□□□□□ -0.879e-7■■■■□ 19.3
MATR3P43243 LPP-201ENST00000414139 502 ntTSL 47.59□□□□□ -1.199e-7■■■■□ 19.3
MATR3P43243 PVT1-203ENST00000513868 1699 ntTSL 1 (best) BASIC13.91□□□□□ -0.184e-7■■■■□ 19.3
MATR3P43243 PVT1-214ENST00000522875 922 ntTSL 5 BASIC7.31□□□□□ -1.244e-7■■■■□ 19.3
MATR3P43243 PVT1-211ENST00000521600 408 ntTSL 24.19□□□□□ -1.744e-7■■■■□ 19.3
MATR3P43243 PVT1-202ENST00000512617 383 ntTSL 33.6□□□□□ -1.834e-7■■■■□ 19.3
MATR3P43243 HNMT-207ENST00000480534 339 ntTSL 36.88□□□□□ -1.315e-11■■■■□ 19.3
MATR3P43243 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.66□□□□□ -1.345e-11■■■■□ 19.3
MATR3P43243 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.161e-6■■■■□ 19.3
MATR3P43243 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.111e-6■■■■□ 19.3
MATR3P43243 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC8.02□□□□□ -1.131e-6■■■■□ 19.3
MATR3P43243 TGFBR3-209ENST00000532540 3913 ntTSL 1 (best)7.59□□□□□ -1.191e-6■■■■□ 19.3
MATR3P43243 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.223e-6■■■■□ 19.3
MATR3P43243 PTPRG-207ENST00000495879 3011 ntTSL 1 (best)21.01■□□□□ 0.952e-6■■■■□ 19.3
MATR3P43243 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.163e-7■■■■□ 19.3
MATR3P43243 PLSCR4-208ENST00000476202 814 ntTSL 513.99□□□□□ -0.173e-7■■■■□ 19.3
MATR3P43243 PLSCR4-203ENST00000433593 2839 ntTSL 2 BASIC13.72□□□□□ -0.213e-7■■■■□ 19.3
MATR3P43243 PLSCR4-202ENST00000383083 3033 ntTSL 5 BASIC12.75□□□□□ -0.373e-7■■■■□ 19.3
MATR3P43243 PLSCR4-205ENST00000460350 1054 ntTSL 512.74□□□□□ -0.373e-7■■■■□ 19.3
MATR3P43243 PLSCR4-201ENST00000354952 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.713e-7■■■■□ 19.3
MATR3P43243 PLSCR4-210ENST00000493382 1375 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.833e-7■■■■□ 19.3
MATR3P43243 PLSCR4-211ENST00000498625 593 ntTSL 47.92□□□□□ -1.143e-7■■■■□ 19.3
MATR3P43243 PLSCR4-209ENST00000481701 683 ntTSL 47.17□□□□□ -1.263e-7■■■■□ 19.3
MATR3P43243 PLSCR4-206ENST00000460885 609 ntTSL 35.78□□□□□ -1.483e-7■■■■□ 19.3
MATR3P43243 PLSCR4-207ENST00000475019 807 ntTSL 35.43□□□□□ -1.543e-7■■■■□ 19.3
MATR3P43243 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.682e-6■■■■□ 19.3
MATR3P43243 MINK1-209ENST00000574453 4941 ntTSL 1 (best)18.48■□□□□ 0.552e-6■■■■□ 19.3
MATR3P43243 MINK1-207ENST00000572330 5299 ntTSL 518.16■□□□□ 0.52e-6■■■■□ 19.3
MATR3P43243 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.392e-6■■■■□ 19.3
MATR3P43243 MINK1-203ENST00000453408 3939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.122e-6■■■■□ 19.3
MATR3P43243 MINK1-213ENST00000577021 675 ntTSL 510.65□□□□□ -0.72e-6■■■■□ 19.3
MATR3P43243 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.976e-7■■■■□ 19.3
MATR3P43243 MED13L-207ENST00000551197 489 ntTSL 56.14□□□□□ -1.436e-7■■■■□ 19.3
MATR3P43243 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC22.49■■□□□ 1.194e-7■■■■□ 19.3
MATR3P43243 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.14e-7■■■■□ 19.3
MATR3P43243 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.544e-7■■■■□ 19.3
MATR3P43243 RREB1-205ENST00000467782 243 ntTSL 517.53■□□□□ 0.44e-7■■■■□ 19.3
MATR3P43243 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC17■□□□□ 0.314e-7■■■■□ 19.3
MATR3P43243 RREB1-206ENST00000471433 1021 ntTSL 514.37□□□□□ -0.114e-7■■■■□ 19.3
MATR3P43243 RREB1-209ENST00000491191 998 ntTSL 514.37□□□□□ -0.114e-7■■■■□ 19.3
MATR3P43243 RREB1-207ENST00000475946 9067 ntTSL 1 (best)9.73□□□□□ -0.854e-7■■■■□ 19.3
MATR3P43243 IQCB1-203ENST00000393650 2253 ntTSL 516.14■□□□□ 0.172e-6■■■■□ 19.3
MATR3P43243 IQCB1-202ENST00000349820 1919 ntTSL 1 (best) BASIC14.17□□□□□ -0.142e-6■■■■□ 19.3
MATR3P43243 IQCB1-204ENST00000460108 988 ntTSL 513.44□□□□□ -0.262e-6■■■■□ 19.3
MATR3P43243 IQCB1-201ENST00000310864 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.432e-6■■■■□ 19.3
MATR3P43243 IQCB1-207ENST00000498104 701 ntTSL 310.62□□□□□ -0.712e-6■■■■□ 19.3
MATR3P43243 MED15-221ENST00000473028 556 ntTSL 419.38■□□□□ 0.692e-6■■■■□ 19.3
MATR3P43243 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.16□□□□□ -1.421e-6■■■■□ 19.3
MATR3P43243 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.491e-6■■■■□ 19.3
MATR3P43243 TOX3-205ENST00000568436 548 ntTSL 320.98■□□□□ 0.951e-8■■■□□ 19.2
MATR3P43243 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC16.68■□□□□ 0.261e-8■■■□□ 19.2
MATR3P43243 TOX3-203ENST00000563091 572 ntTSL 49.37□□□□□ -0.911e-8■■■□□ 19.2
MATR3P43243 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.411e-8■■■□□ 19.2
MATR3P43243 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC31.53■■■□□ 2.642e-6■■■□□ 19.2
MATR3P43243 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC29.04■■■□□ 2.242e-6■■■□□ 19.2
MATR3P43243 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC28.6■■■□□ 2.172e-6■■■□□ 19.2
MATR3P43243 PQLC1-213ENST00000591964 856 ntTSL 327.79■■■□□ 2.042e-6■■■□□ 19.2
MATR3P43243 PQLC1-206ENST00000474967 2319 ntTSL 521.89■■□□□ 1.092e-6■■■□□ 19.2
MATR3P43243 PQLC1-201ENST00000351365 2414 ntTSL 220.56■□□□□ 0.882e-6■■■□□ 19.2
MATR3P43243 PQLC1-204ENST00000466449 2887 ntTSL 219.14■□□□□ 0.652e-6■■■□□ 19.2
MATR3P43243 PQLC1-208ENST00000494607 666 ntTSL 317.61■□□□□ 0.412e-6■■■□□ 19.2
MATR3P43243 PQLC1-205ENST00000469369 593 ntTSL 414.84□□□□□ -0.032e-6■■■□□ 19.2
MATR3P43243 PQLC1-209ENST00000589000 558 ntTSL 412.47□□□□□ -0.412e-6■■■□□ 19.2
MATR3P43243 PQLC1-207ENST00000478144 409 ntTSL 312.45□□□□□ -0.422e-6■■■□□ 19.2
MATR3P43243 DYRK1A-207ENST00000462274 1189 ntTSL 1 (best)27.81■■■□□ 2.046e-7■■■□□ 19.2
MATR3P43243 DYRK1A-206ENST00000455097 338 ntTSL 1 (best)9.67□□□□□ -0.866e-7■■■□□ 19.2
MATR3P43243 DYRK1A-205ENST00000426672 519 ntTSL 54.42□□□□□ -1.76e-7■■■□□ 19.2
MATR3P43243 ROCK2-206ENST00000462366 563 ntTSL 35.18□□□□□ -1.585e-7■■■□□ 19.2
MATR3P43243 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.041e-6■■■□□ 19.2
MATR3P43243 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.531e-6■■■□□ 19.2
MATR3P43243 SORT1-203ENST00000471996 469 ntTSL 320.57■□□□□ 0.881e-7■■■□□ 19.2
MATR3P43243 SORT1-204ENST00000482236 615 ntTSL 312.4□□□□□ -0.421e-7■■■□□ 19.2
MATR3P43243 SORT1-210ENST00000633956 561 ntTSL 45.98□□□□□ -1.451e-7■■■□□ 19.2
MATR3P43243 SMARCA1-201ENST00000371121 3564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.322e-7■■■□□ 19.2
MATR3P43243 SMARCA1-205ENST00000617310 4291 ntTSL 211.82□□□□□ -0.522e-7■■■□□ 19.2
MATR3P43243 SMARCA1-202ENST00000371122 4099 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.732e-7■■■□□ 19.2
MATR3P43243 SMARCA1-203ENST00000371123 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.832e-7■■■□□ 19.2
MATR3P43243 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.36□□□□□ -2.031e-6■■■□□ 19.2
MATR3P43243 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.52■□□□□ 0.232e-6■■■□□ 19.2
MATR3P43243 MAP4K4-217ENST00000496989 574 ntTSL 412.67□□□□□ -0.382e-6■■■□□ 19.2
MATR3P43243 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.031e-6■■■□□ 19.2
MATR3P43243 RAPGEF6-209ENST00000510071 3107 ntTSL 1 (best) BASIC12.45□□□□□ -0.421e-6■■■□□ 19.2
MATR3P43243 RAPGEF6-215ENST00000627212 4694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.561e-6■■■□□ 19.2
MATR3P43243 RAPGEF6-214ENST00000515170 4103 ntTSL 211.33□□□□□ -0.61e-6■■■□□ 19.2
MATR3P43243 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.981e-6■■■□□ 19.2
MATR3P43243 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.561e-6■■■□□ 19.2
MATR3P43243 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.39□□□□□ -1.871e-6■■■□□ 19.2
MATR3P43243 RAPGEF6-203ENST00000503398 149 ntTSL 51.24□□□□□ -2.211e-6■■■□□ 19.2
MATR3P43243 FTX-216ENST00000638985 1367 ntTSL 5 BASIC15.25■□□□□ 0.031e-6■■■□□ 19.2
MATR3P43243 FTX-211ENST00000603672 1077 ntTSL 513.69□□□□□ -0.221e-6■■■□□ 19.2
MATR3P43243 FTX-209ENST00000602812 2356 ntTSL 1 (best)11.59□□□□□ -0.551e-6■■■□□ 19.2
MATR3P43243 FTX-215ENST00000638681 9771 ntTSL 5 BASIC11.02□□□□□ -0.641e-6■■■□□ 19.2
MATR3P43243 FTX-204ENST00000430772 708 ntTSL 58.06□□□□□ -1.122e-7■■■□□ 19.2
MATR3P43243 FTX-206ENST00000602420 751 ntTSL 35.91□□□□□ -1.461e-6■■■□□ 19.2
Retrieved 100 of 16,209 protein–RNA pairs in 114.4 ms