RNA–Protein interactions for RNA: ENST00000484786.5

TRAK1-208, Transcript of trafficking kinesin protein 1, humanhuman

TSL 5 BASIC

Gene TRAK1, Length 2,008 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-208ENST00000484786 NISCHQ9Y2I1 1504 aa34.31■■■■□ 3.08
TRAK1-208ENST00000484786 CCDC180Q9P1Z9 1646 aa29.88■■■□□ 2.37
TRAK1-208ENST00000484786 ZCCHC6Q5VYS8 1495 aaKnown RBP28.82■■■□□ 2.2
TRAK1-208ENST00000484786 DCAF8L2P0C7V8 631 aa28.4■■■□□ 2.14
TRAK1-208ENST00000484786 DCAF1Q9Y4B6 1507 aa28.35■■■□□ 2.13
TRAK1-208ENST00000484786 ABCC9O60706 1549 aa28.29■■■□□ 2.12
TRAK1-208ENST00000484786 SHROOM4Q9ULL8 1493 aa28.06■■■□□ 2.08
TRAK1-208ENST00000484786 MYO15BQ96JP2 1530 aa28.01■■■□□ 2.07
TRAK1-208ENST00000484786 NACADO15069 1562 aa27.84■■■□□ 2.05
TRAK1-208ENST00000484786 RB1CC1Q8TDY2 1594 aa27.61■■■□□ 2.01
TRAK1-208ENST00000484786 SCRIBQ14160 1630 aa27.52■■■□□ 2
TRAK1-208ENST00000484786 UNC13AQ9UPW8 1703 aa27.02■■□□□ 1.92
TRAK1-208ENST00000484786 SUPT5HO00267 1087 aaKnown RBP27.01■■□□□ 1.91
TRAK1-208ENST00000484786 BICRAQ9NZM4 1560 aa26.75■■□□□ 1.87
TRAK1-208ENST00000484786 PABPN1Q86U42 306 aaKnown RBP eCLIP26.7■■□□□ 1.87
TRAK1-208ENST00000484786 CECR2Q9BXF3 1484 aa26.66■■□□□ 1.86
TRAK1-208ENST00000484786 RSF1Q96T23 1441 aaPredicted RBP26.64■■□□□ 1.85
TRAK1-208ENST00000484786 MROH2BQ7Z745 1585 aa26.51■■□□□ 1.83
TRAK1-208ENST00000484786 BAZ1AQ9NRL2 1556 aaPredicted RBP26.49■■□□□ 1.83
TRAK1-208ENST00000484786 SMARCA4P51532 1647 aa26.37■■□□□ 1.81
TRAK1-208ENST00000484786 WIZO95785 1651 aa26.29■■□□□ 1.8
TRAK1-208ENST00000484786 PEG3Q9GZU2 1588 aa26.03■■□□□ 1.76
TRAK1-208ENST00000484786 TOP2AP11388 1531 aaKnown RBP26.02■■□□□ 1.76
TRAK1-208ENST00000484786 EIF4G1Q04637 1599 aaKnown RBP25.97■■□□□ 1.75
TRAK1-208ENST00000484786 ATAD2BQ9ULI0 1458 aa25.94■■□□□ 1.74
TRAK1-208ENST00000484786 SMARCA2P51531 1590 aa25.92■■□□□ 1.74
TRAK1-208ENST00000484786 CHIC1Q5VXU3 224 aa25.83■■□□□ 1.73
TRAK1-208ENST00000484786 BAZ1BQ9UIG0 1483 aaKnown RBP25.81■■□□□ 1.72
TRAK1-208ENST00000484786 CCDC88BA6NC98 1476 aa25.77■■□□□ 1.72
TRAK1-208ENST00000484786 NCAPD3P42695 1498 aa25.71■■□□□ 1.71
TRAK1-208ENST00000484786 HMGXB3Q12766 1538 aa25.67■■□□□ 1.7
TRAK1-208ENST00000484786 CC2D2AQ9P2K1 1620 aa25.59■■□□□ 1.69
TRAK1-208ENST00000484786 TRIM41Q8WV44 630 aa25.39■■□□□ 1.66
TRAK1-208ENST00000484786 ABCC8Q09428 1581 aa25.24■■□□□ 1.63
TRAK1-208ENST00000484786 CFTRP13569 1480 aa25.15■■□□□ 1.62
TRAK1-208ENST00000484786 WRNQ14191 1432 aaPredicted RBP eCLIP25.08■■□□□ 1.61
TRAK1-208ENST00000484786 CADPSQ9ULU8 1353 aa25.07■■□□□ 1.6
TRAK1-208ENST00000484786 PRDM2Q13029 1718 aa24.98■■□□□ 1.59
TRAK1-208ENST00000484786 SYNJ1O43426 1573 aa24.95■■□□□ 1.59
TRAK1-208ENST00000484786 DNAJC5BQ9UF47 199 aa24.95■■□□□ 1.58
TRAK1-208ENST00000484786 FAM9AQ8IZU1 332 aaPredicted RBP24.94■■□□□ 1.58
TRAK1-208ENST00000484786 LOC105371045A0A1W2PR82 267 aa24.86■■□□□ 1.57
TRAK1-208ENST00000484786 TOP2BQ02880 1626 aa24.85■■□□□ 1.57
TRAK1-208ENST00000484786 NESP48681 1621 aa24.83■■□□□ 1.57
TRAK1-208ENST00000484786 LAMC3Q9Y6N6 1575 aa24.83■■□□□ 1.57
TRAK1-208ENST00000484786 BIVM-ERCC5R4GMW8 1640 aa24.81■■□□□ 1.56
TRAK1-208ENST00000484786 FANCD2Q9BXW9 1451 aa24.8■■□□□ 1.56
TRAK1-208ENST00000484786 CUX1P39880 1505 aa24.79■■□□□ 1.56
TRAK1-208ENST00000484786 SOGA1O94964 1423 aa24.78■■□□□ 1.56
TRAK1-208ENST00000484786 EEA1Q15075 1411 aa24.73■■□□□ 1.55
TRAK1-208ENST00000484786 RUSC2Q8N2Y8 1516 aa24.67■■□□□ 1.54
TRAK1-208ENST00000484786 PDS5BQ9NTI5 1447 aa24.66■■□□□ 1.54
TRAK1-208ENST00000484786 CEP164Q9UPV0 1460 aa24.64■■□□□ 1.53
TRAK1-208ENST00000484786 CSRNP3Q8WYN3 585 aa24.61■■□□□ 1.53
TRAK1-208ENST00000484786 EHMT2Q96KQ7 1210 aa24.6■■□□□ 1.53
TRAK1-208ENST00000484786 DNMBPQ6XZF7 1577 aa24.56■■□□□ 1.52
TRAK1-208ENST00000484786 FGD5Q6ZNL6 1462 aa24.52■■□□□ 1.52
TRAK1-208ENST00000484786 TOPBP1Q92547 1522 aa24.52■■□□□ 1.51
TRAK1-208ENST00000484786 KIF21AQ7Z4S6 1674 aa24.51■■□□□ 1.51
TRAK1-208ENST00000484786 URB2Q14146 1524 aaKnown RBP24.47■■□□□ 1.51
TRAK1-208ENST00000484786 KIF27Q86VH2 1401 aa24.45■■□□□ 1.5
TRAK1-208ENST00000484786 POLA1P09884 1462 aaPredicted RBP24.4■■□□□ 1.5
TRAK1-208ENST00000484786 GOLGA3Q08378 1498 aa24.39■■□□□ 1.5
TRAK1-208ENST00000484786 KIF21BO75037 1637 aa24.38■■□□□ 1.49
TRAK1-208ENST00000484786 CUX2O14529 1486 aa24.38■■□□□ 1.49
TRAK1-208ENST00000484786 RAD54L2Q9Y4B4 1467 aa24.33■■□□□ 1.49
TRAK1-208ENST00000484786 MRC2Q9UBG0 1479 aa24.33■■□□□ 1.49
TRAK1-208ENST00000484786 UBTFP17480 764 aaKnown RBP24.32■■□□□ 1.48
TRAK1-208ENST00000484786 TNIKQ9UKE5 1360 aa24.32■■□□□ 1.48
TRAK1-208ENST00000484786 ABCA10Q8WWZ4 1543 aa24.3■■□□□ 1.48
TRAK1-208ENST00000484786 ERCC6Q03468 1493 aa24.28■■□□□ 1.48
TRAK1-208ENST00000484786 PRXQ9BXM0 1461 aa24.27■■□□□ 1.48
TRAK1-208ENST00000484786 RAPGEF2Q9Y4G8 1499 aa24.27■■□□□ 1.48
TRAK1-208ENST00000484786 ERICH3Q5RHP9 1530 aa24.23■■□□□ 1.47
TRAK1-208ENST00000484786 IGF1RP08069 1367 aa24.22■■□□□ 1.47
TRAK1-208ENST00000484786 CEP162Q5TB80 1403 aa24.2■■□□□ 1.46
TRAK1-208ENST00000484786 WDR62O43379 1518 aa24.19■■□□□ 1.46
TRAK1-208ENST00000484786 WDR97A6NE52 1622 aa24.19■■□□□ 1.46
TRAK1-208ENST00000484786 TARBP1Q13395 1621 aaKnown RBP24.13■■□□□ 1.45
TRAK1-208ENST00000484786 CARMIL1Q5VZK9 1371 aa24.11■■□□□ 1.45
TRAK1-208ENST00000484786 TDRD9Q8NDG6 1382 aaKnown RBP24.11■■□□□ 1.45
TRAK1-208ENST00000484786 THOC2Q8NI27 1593 aaKnown RBP24.1■■□□□ 1.45
TRAK1-208ENST00000484786 ABCA5Q8WWZ7 1642 aa24.09■■□□□ 1.45
TRAK1-208ENST00000484786 GAPVD1Q14C86 1478 aa24.07■■□□□ 1.44
TRAK1-208ENST00000484786 IFT140Q96RY7 1462 aa24.04■■□□□ 1.44
TRAK1-208ENST00000484786 CUL7Q14999 1698 aa24.02■■□□□ 1.44
TRAK1-208ENST00000484786 CLIP1P30622 1438 aa24.01■■□□□ 1.43
TRAK1-208ENST00000484786 AQRO60306 1485 aaKnown RBP eCLIP23.95■■□□□ 1.422e-8■■■■□ 23
TRAK1-208ENST00000484786 RANGAP1P46060 587 aaPredicted RBP23.94■■□□□ 1.42
TRAK1-208ENST00000484786 ZNF608Q9ULD9 1512 aaPredicted RBP23.91■■□□□ 1.42
TRAK1-208ENST00000484786 PBRM1Q86U86 1689 aa23.9■■□□□ 1.42
TRAK1-208ENST00000484786 GRIN2BQ13224 1484 aa23.88■■□□□ 1.41
TRAK1-208ENST00000484786 EIF4G3O43432 1585 aaKnown RBP23.82■■□□□ 1.4
TRAK1-208ENST00000484786 FHAD1B1AJZ9 1412 aa23.8■■□□□ 1.4
TRAK1-208ENST00000484786 VPS8Q8N3P4 1428 aa23.8■■□□□ 1.4
TRAK1-208ENST00000484786 ADAMTS12P58397 1594 aa23.78■■□□□ 1.4
TRAK1-208ENST00000484786 PCGF6Q9BYE7 350 aa23.76■■□□□ 1.39
TRAK1-208ENST00000484786 ARAP1Q96P48 1450 aa23.75■■□□□ 1.39
TRAK1-208ENST00000484786 ARHGAP35Q9NRY4 1499 aa23.75■■□□□ 1.39
TRAK1-208ENST00000484786 TRIM26Q12899 539 aaPredicted RBP23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms