RNA–Protein interactions for RNA: ENST00000627212.2

RAPGEF6-215, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF6, Length 4,694 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-215ENST00000627212 DCAF8L2P0C7V8 631 aa17.31■□□□□ 0.36
RAPGEF6-215ENST00000627212 SUPT5HO00267 1087 aaKnown RBP16.75■□□□□ 0.27
RAPGEF6-215ENST00000627212 SHROOM4Q9ULL8 1493 aa16.4■□□□□ 0.22
RAPGEF6-215ENST00000627212 EHMT2Q96KQ7 1210 aa16.38■□□□□ 0.21
RAPGEF6-215ENST00000627212 NISCHQ9Y2I1 1504 aa16.16■□□□□ 0.18
RAPGEF6-215ENST00000627212 PCGF6Q9BYE7 350 aa15.92■□□□□ 0.14
RAPGEF6-215ENST00000627212 FAM9AQ8IZU1 332 aaPredicted RBP15.86■□□□□ 0.13
RAPGEF6-215ENST00000627212 TTBK1Q5TCY1 1321 aaPredicted RBP15.82■□□□□ 0.12
RAPGEF6-215ENST00000627212 PELP1Q8IZL8 1130 aaKnown RBP15.55■□□□□ 0.08
RAPGEF6-215ENST00000627212 APLP2Q06481 763 aa15.51■□□□□ 0.07
RAPGEF6-215ENST00000627212 RANGAP1P46060 587 aaPredicted RBP15.46■□□□□ 0.07
RAPGEF6-215ENST00000627212 CCER1Q8TC90 406 aaPredicted RBP15.38■□□□□ 0.05
RAPGEF6-215ENST00000627212 PPARGC1BQ86YN6 1023 aaKnown RBP15.34■□□□□ 0.05
RAPGEF6-215ENST00000627212 CENPBP07199 599 aaPredicted RBP15.31■□□□□ 0.04
RAPGEF6-215ENST00000627212 TRIM41Q8WV44 630 aa15.31■□□□□ 0.04
RAPGEF6-215ENST00000627212 YTHDC1Q96MU7 727 aaKnown RBP15.29■□□□□ 0.04
RAPGEF6-215ENST00000627212 ZEB1P37275 1124 aaPredicted RBP15.2■□□□□ 0.02
RAPGEF6-215ENST00000627212 UBTFP17480 764 aaKnown RBP15.12■□□□□ 0.01
RAPGEF6-215ENST00000627212 ATP1B4Q9UN42 357 aaPredicted RBP15.11■□□□□ 0.01
RAPGEF6-215ENST00000627212 ERICH6Q7L0X2 663 aa15.1■□□□□ 0.01
RAPGEF6-215ENST00000627212 LOC105371045A0A1W2PR82 267 aa15.08■□□□□ 0
RAPGEF6-215ENST00000627212 HRCP23327 699 aa15.08■□□□□ 0
RAPGEF6-215ENST00000627212 TRIM26Q12899 539 aaPredicted RBP14.97□□□□□ -0.01
RAPGEF6-215ENST00000627212 CHIC1Q5VXU3 224 aa14.89□□□□□ -0.03
RAPGEF6-215ENST00000627212 NEFLP07196 543 aa14.88□□□□□ -0.03
RAPGEF6-215ENST00000627212 ITGAEP38570 1179 aa14.83□□□□□ -0.04
RAPGEF6-215ENST00000627212 HNRNPUL2Q1KMD3 747 aaKnown RBP14.78□□□□□ -0.04
RAPGEF6-215ENST00000627212 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.76□□□□□ -0.05
RAPGEF6-215ENST00000627212 CNGB1Q14028 1251 aaPredicted RBP14.73□□□□□ -0.05
RAPGEF6-215ENST00000627212 MYT1Q01538 1121 aa14.66□□□□□ -0.06
RAPGEF6-215ENST00000627212 POLR3GLQ9BT43 218 aa14.65□□□□□ -0.06
RAPGEF6-215ENST00000627212 DIEXFQ68CQ4 756 aaKnown RBP14.6□□□□□ -0.07
RAPGEF6-215ENST00000627212 GTF3C3Q9Y5Q9 886 aa14.49□□□□□ -0.09
RAPGEF6-215ENST00000627212 BCANQ96GW7 911 aa14.45□□□□□ -0.1
RAPGEF6-215ENST00000627212 DAXXQ9UER7 740 aaPredicted RBP14.37□□□□□ -0.11
RAPGEF6-215ENST00000627212 NEUROD1Q13562 356 aa14.31□□□□□ -0.12
RAPGEF6-215ENST00000627212 MYT1LQ9UL68 1186 aa14.3□□□□□ -0.12
RAPGEF6-215ENST00000627212 FAM50AQ14320 339 aaKnown RBP14.27□□□□□ -0.12
RAPGEF6-215ENST00000627212 ACIN1Q9UKV3 1341 aaKnown RBP14.2□□□□□ -0.14
RAPGEF6-215ENST00000627212 RTL5Q5HYW3 569 aaPredicted RBP14.18□□□□□ -0.14
RAPGEF6-215ENST00000627212 SLC4A1APQ9BWU0 796 aaKnown RBP14.17□□□□□ -0.14
RAPGEF6-215ENST00000627212 ZNF316A6NFI3 1004 aaPredicted RBP14.16□□□□□ -0.14
RAPGEF6-215ENST00000627212 CLSPNQ9HAW4 1339 aa14.16□□□□□ -0.14
RAPGEF6-215ENST00000627212 TRIM52Q96A61 297 aa14.15□□□□□ -0.14
RAPGEF6-215ENST00000627212 PABPN1Q86U42 306 aaKnown RBP eCLIP14.12□□□□□ -0.15
RAPGEF6-215ENST00000627212 ZNF326Q5BKZ1 582 aaKnown RBP14.11□□□□□ -0.15
RAPGEF6-215ENST00000627212 ANP32CO43423 234 aa14.06□□□□□ -0.16
RAPGEF6-215ENST00000627212 CDK11AQ9UQ88 783 aaPredicted RBP14.01□□□□□ -0.17
RAPGEF6-215ENST00000627212 P3H3Q8IVL6 736 aa14□□□□□ -0.17
RAPGEF6-215ENST00000627212 ARID3CA6NKF2 412 aa13.99□□□□□ -0.17
RAPGEF6-215ENST00000627212 BCL11AQ9H165 835 aa13.97□□□□□ -0.17
RAPGEF6-215ENST00000627212 SCAF1Q9H7N4 1312 aaKnown RBP13.95□□□□□ -0.18
RAPGEF6-215ENST00000627212 FKBP8Q14318 412 aa13.93□□□□□ -0.18
RAPGEF6-215ENST00000627212 CSRNP3Q8WYN3 585 aa13.92□□□□□ -0.18
RAPGEF6-215ENST00000627212 ABCC9O60706 1549 aa13.91□□□□□ -0.18
RAPGEF6-215ENST00000627212 NPM2Q86SE8 214 aaKnown RBP13.89□□□□□ -0.19
RAPGEF6-215ENST00000627212 DDX10Q13206 875 aaKnown RBP13.87□□□□□ -0.19
RAPGEF6-215ENST00000627212 MIER1Q8N108 512 aa13.81□□□□□ -0.2
RAPGEF6-215ENST00000627212 FBLN2P98095 1184 aa13.81□□□□□ -0.2
RAPGEF6-215ENST00000627212 HNRNPUQ00839 825 aaKnown RBP eCLIP13.81□□□□□ -0.2
RAPGEF6-215ENST00000627212 HIRIP3Q9BW71 556 aaPredicted RBP13.8□□□□□ -0.2
RAPGEF6-215ENST00000627212 SALL2Q9Y467 1007 aaPredicted RBP13.8□□□□□ -0.2
RAPGEF6-215ENST00000627212 FAM9BQ8IZU0 186 aa13.77□□□□□ -0.2
RAPGEF6-215ENST00000627212 IRX6P78412 446 aaPredicted RBP13.76□□□□□ -0.21
RAPGEF6-215ENST00000627212 ANP32AP39687 249 aaKnown RBP13.75□□□□□ -0.21
RAPGEF6-215ENST00000627212 CANXP27824 592 aaKnown RBP13.74□□□□□ -0.21
RAPGEF6-215ENST00000627212 ZNF777Q9ULD5 760 aaPredicted RBP13.74□□□□□ -0.21
RAPGEF6-215ENST00000627212 EIF5BO60841 1220 aaKnown RBP13.73□□□□□ -0.21
RAPGEF6-215ENST00000627212 NBR1Q14596 966 aa13.71□□□□□ -0.22
RAPGEF6-215ENST00000627212 DCAF1Q9Y4B6 1507 aa13.69□□□□□ -0.22
RAPGEF6-215ENST00000627212 SENP3-EIF4A1A0A087X0R7 540 aa13.68□□□□□ -0.22
RAPGEF6-215ENST00000627212 MYO15BQ96JP2 1530 aa13.68□□□□□ -0.22
RAPGEF6-215ENST00000627212 SLC24A1O60721 1099 aa13.67□□□□□ -0.22
RAPGEF6-215ENST00000627212 CHIC2Q9UKJ5 165 aa13.65□□□□□ -0.22
RAPGEF6-215ENST00000627212 TONSLQ96HA7 1378 aa13.65□□□□□ -0.22
RAPGEF6-215ENST00000627212 ZBTB47Q9UFB7 747 aaPredicted RBP13.65□□□□□ -0.22
RAPGEF6-215ENST00000627212 ARXQ96QS3 562 aa13.61□□□□□ -0.23
RAPGEF6-215ENST00000627212 CCDC136Q96JN2 1154 aa13.59□□□□□ -0.23
RAPGEF6-215ENST00000627212 MRS2Q9HD23 443 aa13.56□□□□□ -0.24
RAPGEF6-215ENST00000627212 TMC1Q8TDI8 760 aa13.53□□□□□ -0.24
RAPGEF6-215ENST00000627212 KDM2AQ9Y2K7 1162 aa13.51□□□□□ -0.25
RAPGEF6-215ENST00000627212 CHGAP10645 457 aaKnown RBP13.5□□□□□ -0.25
RAPGEF6-215ENST00000627212 NEFMP07197 916 aa13.48□□□□□ -0.25
RAPGEF6-215ENST00000627212 HSP90AA1P07900 732 aaKnown RBP13.48□□□□□ -0.25
RAPGEF6-215ENST00000627212 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.46□□□□□ -0.251e-6■■□□□ 13.7
RAPGEF6-215ENST00000627212 SCRIBQ14160 1630 aa13.43□□□□□ -0.26
RAPGEF6-215ENST00000627212 SUPT16HQ9Y5B9 1047 aaKnown RBP13.43□□□□□ -0.26
RAPGEF6-215ENST00000627212 SENP3Q9H4L4 574 aaPredicted RBP13.43□□□□□ -0.26
RAPGEF6-215ENST00000627212 RRP7BPQ9NSQ0 103 aa13.43□□□□□ -0.26
RAPGEF6-215ENST00000627212 UPF2Q9HAU5 1272 aaKnown RBP13.39□□□□□ -0.27
RAPGEF6-215ENST00000627212 CLIP1P30622 1438 aa13.39□□□□□ -0.27
RAPGEF6-215ENST00000627212 SIN3AQ96ST3 1273 aa13.37□□□□□ -0.27
RAPGEF6-215ENST00000627212 ANP32EQ9BTT0 268 aa13.37□□□□□ -0.27
RAPGEF6-215ENST00000627212 ZCCHC6Q5VYS8 1495 aaKnown RBP13.36□□□□□ -0.27
RAPGEF6-215ENST00000627212 EIF4G2P78344 907 aaKnown RBP eCLIP13.36□□□□□ -0.274e-9■■■■■ 36.4
RAPGEF6-215ENST00000627212 PLPPR3Q6T4P5 718 aa13.36□□□□□ -0.27
RAPGEF6-215ENST00000627212 ANP32BQ92688 251 aaKnown RBP13.34□□□□□ -0.27
RAPGEF6-215ENST00000627212 WDR43Q15061 677 aaKnown RBP eCLIP13.33□□□□□ -0.27
RAPGEF6-215ENST00000627212 MTUS2Q5JR59 1369 aa13.33□□□□□ -0.28
RAPGEF6-215ENST00000627212 CEP162Q5TB80 1403 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms