RNA–Protein interactions for RNA: ENST00000308008.10

RAPGEF6-202, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF6, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-202ENST00000308008 CHIC1Q5VXU3 224 aa6.98□□□□□ -1.29
RAPGEF6-202ENST00000308008 AEBP2Q6ZN18 517 aaPredicted RBP6.65□□□□□ -1.34
RAPGEF6-202ENST00000308008 EHMT2Q96KQ7 1210 aa6.65□□□□□ -1.35
RAPGEF6-202ENST00000308008 SLC24A1O60721 1099 aa6.49□□□□□ -1.37
RAPGEF6-202ENST00000308008 SHROOM4Q9ULL8 1493 aa6.29□□□□□ -1.4
RAPGEF6-202ENST00000308008 CCDC180Q9P1Z9 1646 aa6.28□□□□□ -1.4
RAPGEF6-202ENST00000308008 PHF23Q9BUL5 403 aaPredicted RBP6.25□□□□□ -1.41
RAPGEF6-202ENST00000308008 PLPPR3Q6T4P5 718 aa6.16□□□□□ -1.42
RAPGEF6-202ENST00000308008 RTN4Q9NQC3 1192 aaKnown RBP6.07□□□□□ -1.44
RAPGEF6-202ENST00000308008 KCNA4P22459 653 aa6.04□□□□□ -1.44
RAPGEF6-202ENST00000308008 MYO15BQ96JP2 1530 aa6□□□□□ -1.45
RAPGEF6-202ENST00000308008 DNAJC5Q9H3Z4 198 aa5.99□□□□□ -1.45
RAPGEF6-202ENST00000308008 NISCHQ9Y2I1 1504 aa5.98□□□□□ -1.45
RAPGEF6-202ENST00000308008 CSRNP3Q8WYN3 585 aa5.96□□□□□ -1.46
RAPGEF6-202ENST00000308008 CUX2O14529 1486 aa5.92□□□□□ -1.46
RAPGEF6-202ENST00000308008 AMER1Q5JTC6 1135 aaPredicted RBP5.89□□□□□ -1.47
RAPGEF6-202ENST00000308008 SLC4A1APQ9BWU0 796 aaKnown RBP5.86□□□□□ -1.47
RAPGEF6-202ENST00000308008 RB1CC1Q8TDY2 1594 aa5.81□□□□□ -1.48
RAPGEF6-202ENST00000308008 NACADO15069 1562 aa5.79□□□□□ -1.48
RAPGEF6-202ENST00000308008 PRKCSHP14314 528 aaPredicted RBP5.79□□□□□ -1.48
RAPGEF6-202ENST00000308008 ADRA2BP18089 450 aa5.75□□□□□ -1.49
RAPGEF6-202ENST00000308008 UNC13AQ9UPW8 1703 aa5.73□□□□□ -1.49
RAPGEF6-202ENST00000308008 NCBP3Q53F19 620 aaKnown RBP5.71□□□□□ -1.49
RAPGEF6-202ENST00000308008 DAXXQ9UER7 740 aaPredicted RBP5.64□□□□□ -1.51
RAPGEF6-202ENST00000308008 BICRAQ9NZM4 1560 aa5.62□□□□□ -1.51
RAPGEF6-202ENST00000308008 DCAF8L2P0C7V8 631 aa5.62□□□□□ -1.51
RAPGEF6-202ENST00000308008 HAP1P54257 671 aaPredicted RBP5.6□□□□□ -1.51
RAPGEF6-202ENST00000308008 PELP1Q8IZL8 1130 aaKnown RBP5.58□□□□□ -1.52
RAPGEF6-202ENST00000308008 TPRNQ4KMQ1 711 aa5.57□□□□□ -1.52
RAPGEF6-202ENST00000308008 TULP1O00294 542 aaPredicted RBP5.56□□□□□ -1.52
RAPGEF6-202ENST00000308008 HRCP23327 699 aa5.55□□□□□ -1.52
RAPGEF6-202ENST00000308008 BCANQ96GW7 911 aa5.53□□□□□ -1.52
RAPGEF6-202ENST00000308008 TAOK2Q9UL54 1235 aa5.53□□□□□ -1.52
RAPGEF6-202ENST00000308008 SCAF1Q9H7N4 1312 aaKnown RBP5.53□□□□□ -1.52
RAPGEF6-202ENST00000308008 DNAJC5BQ9UF47 199 aa5.53□□□□□ -1.52
RAPGEF6-202ENST00000308008 DCAF1Q9Y4B6 1507 aa5.53□□□□□ -1.52
RAPGEF6-202ENST00000308008 FKBP8Q14318 412 aa5.52□□□□□ -1.53
RAPGEF6-202ENST00000308008 PPARGC1BQ86YN6 1023 aaKnown RBP5.52□□□□□ -1.53
RAPGEF6-202ENST00000308008 SENP3Q9H4L4 574 aaPredicted RBP5.52□□□□□ -1.53
RAPGEF6-202ENST00000308008 TIMELESSQ9UNS1 1208 aa5.51□□□□□ -1.53
RAPGEF6-202ENST00000308008 RANGAP1P46060 587 aaPredicted RBP5.49□□□□□ -1.53
RAPGEF6-202ENST00000308008 ZBTB22O15209 634 aa5.49□□□□□ -1.53
RAPGEF6-202ENST00000308008 ABCC9O60706 1549 aa5.47□□□□□ -1.53
RAPGEF6-202ENST00000308008 CC2D2AQ9P2K1 1620 aa5.47□□□□□ -1.53
RAPGEF6-202ENST00000308008 THOC2Q8NI27 1593 aaKnown RBP5.45□□□□□ -1.54
RAPGEF6-202ENST00000308008 PLCB2Q00722 1185 aa5.44□□□□□ -1.54
RAPGEF6-202ENST00000308008 PPP6R1Q9UPN7 881 aa5.44□□□□□ -1.54
RAPGEF6-202ENST00000308008 PPP4R3CPQ6ZMV5 832 aa5.41□□□□□ -1.54
RAPGEF6-202ENST00000308008 NPM3O75607 178 aaKnown RBP5.41□□□□□ -1.54
RAPGEF6-202ENST00000308008 ARXQ96QS3 562 aa5.41□□□□□ -1.54
RAPGEF6-202ENST00000308008 EIF4G1Q04637 1599 aaKnown RBP5.39□□□□□ -1.55
RAPGEF6-202ENST00000308008 HOMEZQ8IX15 550 aa5.37□□□□□ -1.55
RAPGEF6-202ENST00000308008 BAZ1BQ9UIG0 1483 aaKnown RBP5.36□□□□□ -1.55
RAPGEF6-202ENST00000308008 MYT1Q01538 1121 aa5.36□□□□□ -1.55
RAPGEF6-202ENST00000308008 PODXL2Q9NZ53 605 aa5.36□□□□□ -1.55
RAPGEF6-202ENST00000308008 WDR97A6NE52 1622 aa5.34□□□□□ -1.55
RAPGEF6-202ENST00000308008 FAM9AQ8IZU1 332 aaPredicted RBP5.33□□□□□ -1.56
RAPGEF6-202ENST00000308008 GTF3C3Q9Y5Q9 886 aa5.33□□□□□ -1.56
RAPGEF6-202ENST00000308008 ERCC6L2Q5T890 1561 aa5.33□□□□□ -1.56
RAPGEF6-202ENST00000308008 CECR2Q9BXF3 1484 aa5.33□□□□□ -1.56
RAPGEF6-202ENST00000308008 SMARCA2P51531 1590 aa5.32□□□□□ -1.56
RAPGEF6-202ENST00000308008 C14orf37Q86TY3 774 aa5.31□□□□□ -1.56
RAPGEF6-202ENST00000308008 HMGXB3Q12766 1538 aa5.3□□□□□ -1.56
RAPGEF6-202ENST00000308008 FOXD4L1Q9NU39 408 aa5.29□□□□□ -1.56
RAPGEF6-202ENST00000308008 BCL11AQ9H165 835 aa5.28□□□□□ -1.56
RAPGEF6-202ENST00000308008 LAMC3Q9Y6N6 1575 aa5.28□□□□□ -1.56
RAPGEF6-202ENST00000308008 SUPT5HO00267 1087 aaKnown RBP5.27□□□□□ -1.57
RAPGEF6-202ENST00000308008 CFAP44Q96MT7 982 aa5.26□□□□□ -1.57
RAPGEF6-202ENST00000308008 PEG3Q9GZU2 1588 aa5.25□□□□□ -1.57
RAPGEF6-202ENST00000308008 FBLN2P98095 1184 aa5.24□□□□□ -1.57
RAPGEF6-202ENST00000308008 WDR62O43379 1518 aa5.24□□□□□ -1.57
RAPGEF6-202ENST00000308008 APLP2Q06481 763 aa5.23□□□□□ -1.57
RAPGEF6-202ENST00000308008 VSIG10Q8N0Z9 540 aa5.22□□□□□ -1.57
RAPGEF6-202ENST00000308008 BAZ1AQ9NRL2 1556 aaPredicted RBP5.21□□□□□ -1.57
RAPGEF6-202ENST00000308008 NBR1Q14596 966 aa5.21□□□□□ -1.58
RAPGEF6-202ENST00000308008 NEUROD1Q13562 356 aa5.21□□□□□ -1.58
RAPGEF6-202ENST00000308008 PAXIP1Q6ZW49 1069 aaPredicted RBP5.2□□□□□ -1.58
RAPGEF6-202ENST00000308008 ERICH6Q7L0X2 663 aa5.2□□□□□ -1.58
RAPGEF6-202ENST00000308008 PCGF6Q9BYE7 350 aa5.2□□□□□ -1.58
RAPGEF6-202ENST00000308008 KLHL34Q8N239 644 aa5.19□□□□□ -1.58
RAPGEF6-202ENST00000308008 TTBK1Q5TCY1 1321 aaPredicted RBP5.19□□□□□ -1.58
RAPGEF6-202ENST00000308008 KDM2AQ9Y2K7 1162 aa5.19□□□□□ -1.58
RAPGEF6-202ENST00000308008 RIMBP3CA6NJZ7 1639 aa5.18□□□□□ -1.58
RAPGEF6-202ENST00000308008 RIMBP3BA6NNM3 1639 aa5.18□□□□□ -1.58
RAPGEF6-202ENST00000308008 RIMBP3Q9UFD9 1639 aa5.18□□□□□ -1.58
RAPGEF6-202ENST00000308008 PRDM2Q13029 1718 aa5.18□□□□□ -1.58
RAPGEF6-202ENST00000308008 NPM2Q86SE8 214 aaKnown RBP5.17□□□□□ -1.58
RAPGEF6-202ENST00000308008 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.17□□□□□ -1.58
RAPGEF6-202ENST00000308008 NCAPD3P42695 1498 aa5.17□□□□□ -1.58
RAPGEF6-202ENST00000308008 KDM6BO15054 1643 aa5.17□□□□□ -1.58
RAPGEF6-202ENST00000308008 TMEM132AQ24JP5 1023 aa5.15□□□□□ -1.58
RAPGEF6-202ENST00000308008 ACIN1Q9UKV3 1341 aaKnown RBP5.15□□□□□ -1.59
RAPGEF6-202ENST00000308008 RSF1Q96T23 1441 aaPredicted RBP5.13□□□□□ -1.59
RAPGEF6-202ENST00000308008 ARID3AQ99856 593 aa5.11□□□□□ -1.59
RAPGEF6-202ENST00000308008 FOXD1Q16676 465 aa5.11□□□□□ -1.59
RAPGEF6-202ENST00000308008 PIAS4Q8N2W9 510 aaPredicted RBP5.11□□□□□ -1.59
RAPGEF6-202ENST00000308008 TSHZ2Q9NRE2 1034 aa5.08□□□□□ -1.6
RAPGEF6-202ENST00000308008 UBTFP17480 764 aaKnown RBP5.06□□□□□ -1.6
RAPGEF6-202ENST00000308008 TRIM26Q12899 539 aaPredicted RBP5.06□□□□□ -1.6
RAPGEF6-202ENST00000308008 CNKSR2Q8WXI2 1034 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms