RNA–Protein interactions for RNA: ENST00000515170.5

RAPGEF6-214, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

TSL 2

Gene RAPGEF6, Length 4,103 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-214ENST00000515170 NISCHQ9Y2I1 1504 aa18.86■□□□□ 0.61
RAPGEF6-214ENST00000515170 DCAF8L2P0C7V8 631 aa18.39■□□□□ 0.53
RAPGEF6-214ENST00000515170 SHROOM4Q9ULL8 1493 aa17.49■□□□□ 0.39
RAPGEF6-214ENST00000515170 SUPT5HO00267 1087 aaKnown RBP17.35■□□□□ 0.37
RAPGEF6-214ENST00000515170 EHMT2Q96KQ7 1210 aa16.64■□□□□ 0.26
RAPGEF6-214ENST00000515170 ABCC9O60706 1549 aa16.31■□□□□ 0.2
RAPGEF6-214ENST00000515170 FAM9AQ8IZU1 332 aaPredicted RBP16.3■□□□□ 0.2
RAPGEF6-214ENST00000515170 PABPN1Q86U42 306 aaKnown RBP eCLIP16.03■□□□□ 0.16
RAPGEF6-214ENST00000515170 TRIM41Q8WV44 630 aa15.97■□□□□ 0.15
RAPGEF6-214ENST00000515170 RANGAP1P46060 587 aaPredicted RBP15.95■□□□□ 0.14
RAPGEF6-214ENST00000515170 TTBK1Q5TCY1 1321 aaPredicted RBP15.94■□□□□ 0.14
RAPGEF6-214ENST00000515170 CHIC1Q5VXU3 224 aa15.68■□□□□ 0.1
RAPGEF6-214ENST00000515170 PCGF6Q9BYE7 350 aa15.68■□□□□ 0.1
RAPGEF6-214ENST00000515170 LOC105371045A0A1W2PR82 267 aa15.65■□□□□ 0.1
RAPGEF6-214ENST00000515170 ZCCHC6Q5VYS8 1495 aaKnown RBP15.64■□□□□ 0.09
RAPGEF6-214ENST00000515170 UBTFP17480 764 aaKnown RBP15.64■□□□□ 0.09
RAPGEF6-214ENST00000515170 PPARGC1BQ86YN6 1023 aaKnown RBP15.62■□□□□ 0.09
RAPGEF6-214ENST00000515170 APLP2Q06481 763 aa15.62■□□□□ 0.09
RAPGEF6-214ENST00000515170 CCDC180Q9P1Z9 1646 aa15.56■□□□□ 0.08
RAPGEF6-214ENST00000515170 ATP1B4Q9UN42 357 aaPredicted RBP15.54■□□□□ 0.08
RAPGEF6-214ENST00000515170 SCRIBQ14160 1630 aa15.54■□□□□ 0.08
RAPGEF6-214ENST00000515170 CCER1Q8TC90 406 aaPredicted RBP15.16■□□□□ 0.02
RAPGEF6-214ENST00000515170 ITGAEP38570 1179 aa15.12■□□□□ 0.01
RAPGEF6-214ENST00000515170 RB1CC1Q8TDY2 1594 aa15.11■□□□□ 0.01
RAPGEF6-214ENST00000515170 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.07■□□□□ 0
RAPGEF6-214ENST00000515170 HNRNPUL2Q1KMD3 747 aaKnown RBP15.07■□□□□ 0
RAPGEF6-214ENST00000515170 RSF1Q96T23 1441 aaPredicted RBP15.03■□□□□ -0
RAPGEF6-214ENST00000515170 TRIM26Q12899 539 aaPredicted RBP15.02■□□□□ -0
RAPGEF6-214ENST00000515170 NACADO15069 1562 aa15.02■□□□□ -0
RAPGEF6-214ENST00000515170 CECR2Q9BXF3 1484 aa15□□□□□ -0.01
RAPGEF6-214ENST00000515170 FBLN2P98095 1184 aa14.97□□□□□ -0.01
RAPGEF6-214ENST00000515170 P3H3Q8IVL6 736 aa14.92□□□□□ -0.02
RAPGEF6-214ENST00000515170 CSRNP3Q8WYN3 585 aa14.91□□□□□ -0.02
RAPGEF6-214ENST00000515170 DCAF1Q9Y4B6 1507 aa14.88□□□□□ -0.03
RAPGEF6-214ENST00000515170 ARID3CA6NKF2 412 aa14.86□□□□□ -0.03
RAPGEF6-214ENST00000515170 ZEB1P37275 1124 aaPredicted RBP14.77□□□□□ -0.04
RAPGEF6-214ENST00000515170 MYT1LQ9UL68 1186 aa14.76□□□□□ -0.05
RAPGEF6-214ENST00000515170 MYO15BQ96JP2 1530 aa14.75□□□□□ -0.05
RAPGEF6-214ENST00000515170 FAM50AQ14320 339 aaKnown RBP14.74□□□□□ -0.05
RAPGEF6-214ENST00000515170 MROH2BQ7Z745 1585 aa14.74□□□□□ -0.05
RAPGEF6-214ENST00000515170 HRCP23327 699 aa14.73□□□□□ -0.05
RAPGEF6-214ENST00000515170 BAZ1BQ9UIG0 1483 aaKnown RBP14.71□□□□□ -0.05
RAPGEF6-214ENST00000515170 BAZ1AQ9NRL2 1556 aaPredicted RBP14.67□□□□□ -0.06
RAPGEF6-214ENST00000515170 YTHDC1Q96MU7 727 aaKnown RBP14.61□□□□□ -0.07
RAPGEF6-214ENST00000515170 CNGB1Q14028 1251 aaPredicted RBP14.56□□□□□ -0.08
RAPGEF6-214ENST00000515170 WRNQ14191 1432 aaPredicted RBP eCLIP14.56□□□□□ -0.08
RAPGEF6-214ENST00000515170 POLR3GLQ9BT43 218 aa14.53□□□□□ -0.08
RAPGEF6-214ENST00000515170 WIZO95785 1651 aa14.53□□□□□ -0.08
RAPGEF6-214ENST00000515170 CCDC88BA6NC98 1476 aa14.51□□□□□ -0.09
RAPGEF6-214ENST00000515170 NEUROD1Q13562 356 aa14.5□□□□□ -0.09
RAPGEF6-214ENST00000515170 TRIM52Q96A61 297 aa14.5□□□□□ -0.09
RAPGEF6-214ENST00000515170 ZNF777Q9ULD5 760 aaPredicted RBP14.47□□□□□ -0.09
RAPGEF6-214ENST00000515170 ABCC8Q09428 1581 aa14.45□□□□□ -0.1
RAPGEF6-214ENST00000515170 SOGA1O94964 1423 aa14.45□□□□□ -0.1
RAPGEF6-214ENST00000515170 CHMP7Q8WUX9 453 aaPredicted RBP14.43□□□□□ -0.1
RAPGEF6-214ENST00000515170 CLIP1P30622 1438 aa14.38□□□□□ -0.11
RAPGEF6-214ENST00000515170 ATAD2BQ9ULI0 1458 aa14.35□□□□□ -0.11
RAPGEF6-214ENST00000515170 CEP162Q5TB80 1403 aa14.34□□□□□ -0.11
RAPGEF6-214ENST00000515170 CENPBP07199 599 aaPredicted RBP14.34□□□□□ -0.11
RAPGEF6-214ENST00000515170 ZNF326Q5BKZ1 582 aaKnown RBP14.34□□□□□ -0.11
RAPGEF6-214ENST00000515170 CHIC2Q9UKJ5 165 aa14.32□□□□□ -0.12
RAPGEF6-214ENST00000515170 ERCC6Q03468 1493 aa14.32□□□□□ -0.12
RAPGEF6-214ENST00000515170 SMARCA2P51531 1590 aa14.31□□□□□ -0.12
RAPGEF6-214ENST00000515170 KIF27Q86VH2 1401 aa14.31□□□□□ -0.12
RAPGEF6-214ENST00000515170 SMARCA4P51532 1647 aa14.3□□□□□ -0.12
RAPGEF6-214ENST00000515170 PELP1Q8IZL8 1130 aaKnown RBP14.28□□□□□ -0.12
RAPGEF6-214ENST00000515170 GOLGA3Q08378 1498 aa14.28□□□□□ -0.12
RAPGEF6-214ENST00000515170 TOP2AP11388 1531 aaKnown RBP14.28□□□□□ -0.12
RAPGEF6-214ENST00000515170 CUX2O14529 1486 aa14.27□□□□□ -0.13
RAPGEF6-214ENST00000515170 TDRD9Q8NDG6 1382 aaKnown RBP14.26□□□□□ -0.13
RAPGEF6-214ENST00000515170 CDK11AQ9UQ88 783 aaPredicted RBP14.26□□□□□ -0.13
RAPGEF6-214ENST00000515170 DIEXFQ68CQ4 756 aaKnown RBP14.25□□□□□ -0.13
RAPGEF6-214ENST00000515170 EEA1Q15075 1411 aa14.24□□□□□ -0.13
RAPGEF6-214ENST00000515170 MTUS2Q5JR59 1369 aa14.21□□□□□ -0.14
RAPGEF6-214ENST00000515170 TNIKQ9UKE5 1360 aa14.2□□□□□ -0.14
RAPGEF6-214ENST00000515170 CADPSQ9ULU8 1353 aa14.2□□□□□ -0.14
RAPGEF6-214ENST00000515170 KCNH8Q96L42 1107 aa14.2□□□□□ -0.14
RAPGEF6-214ENST00000515170 CEP164Q9UPV0 1460 aa14.19□□□□□ -0.14
RAPGEF6-214ENST00000515170 CARMIL1Q5VZK9 1371 aa14.19□□□□□ -0.14
RAPGEF6-214ENST00000515170 RUSC2Q8N2Y8 1516 aa14.18□□□□□ -0.14
RAPGEF6-214ENST00000515170 SLC4A1APQ9BWU0 796 aaKnown RBP14.17□□□□□ -0.14
RAPGEF6-214ENST00000515170 DNAJC5BQ9UF47 199 aa14.16□□□□□ -0.14
RAPGEF6-214ENST00000515170 NPM1P06748 294 aaKnown RBP eCLIP14.13□□□□□ -0.15
RAPGEF6-214ENST00000515170 RRP7BPQ9NSQ0 103 aa14.13□□□□□ -0.15
RAPGEF6-214ENST00000515170 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.11□□□□□ -0.151e-7■■□□□ 13.7
RAPGEF6-214ENST00000515170 PDS5BQ9NTI5 1447 aa14.11□□□□□ -0.15
RAPGEF6-214ENST00000515170 PLPPR3Q6T4P5 718 aa14.11□□□□□ -0.15
RAPGEF6-214ENST00000515170 EIF4G1Q04637 1599 aaKnown RBP14.09□□□□□ -0.15
RAPGEF6-214ENST00000515170 KANK4Q5T7N3 995 aaPredicted RBP14.06□□□□□ -0.16
RAPGEF6-214ENST00000515170 ZNF316A6NFI3 1004 aaPredicted RBP14.05□□□□□ -0.16
RAPGEF6-214ENST00000515170 HIRIP3Q9BW71 556 aaPredicted RBP14.05□□□□□ -0.16
RAPGEF6-214ENST00000515170 PLEKHD1A6NEE1 506 aa14.04□□□□□ -0.16
RAPGEF6-214ENST00000515170 SENP3Q9H4L4 574 aaPredicted RBP14.04□□□□□ -0.16
RAPGEF6-214ENST00000515170 FANCD2Q9BXW9 1451 aa14.03□□□□□ -0.16
RAPGEF6-214ENST00000515170 NEFLP07196 543 aa14.02□□□□□ -0.17
RAPGEF6-214ENST00000515170 RAPGEF2Q9Y4G8 1499 aa14.02□□□□□ -0.17
RAPGEF6-214ENST00000515170 TSPY4P0CV99 314 aa14.01□□□□□ -0.17
RAPGEF6-214ENST00000515170 TSPY10P0CW01 314 aa14.01□□□□□ -0.17
RAPGEF6-214ENST00000515170 CHGAP10645 457 aaKnown RBP14.01□□□□□ -0.17
RAPGEF6-214ENST00000515170 NCAPD3P42695 1498 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms