RNA–Protein interactions for RNA: ENST00000296859.10

RAPGEF6-201, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF6, Length 5,618 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-201ENST00000296859 DCAF8L2P0C7V8 631 aa7.76□□□□□ -1.17
RAPGEF6-201ENST00000296859 FAM9AQ8IZU1 332 aaPredicted RBP7.09□□□□□ -1.27
RAPGEF6-201ENST00000296859 AEBP2Q6ZN18 517 aaPredicted RBP7.03□□□□□ -1.28
RAPGEF6-201ENST00000296859 EHMT2Q96KQ7 1210 aa7.03□□□□□ -1.28
RAPGEF6-201ENST00000296859 CHIC1Q5VXU3 224 aa6.93□□□□□ -1.3
RAPGEF6-201ENST00000296859 MYT1LQ9UL68 1186 aa6.88□□□□□ -1.31
RAPGEF6-201ENST00000296859 APLP2Q06481 763 aa6.84□□□□□ -1.31
RAPGEF6-201ENST00000296859 ATP1B4Q9UN42 357 aaPredicted RBP6.83□□□□□ -1.32
RAPGEF6-201ENST00000296859 USP34Q70CQ2 3546 aa6.81□□□□□ -1.32
RAPGEF6-201ENST00000296859 RANGAP1P46060 587 aaPredicted RBP6.79□□□□□ -1.32
RAPGEF6-201ENST00000296859 SUPT5HO00267 1087 aaKnown RBP6.78□□□□□ -1.32
RAPGEF6-201ENST00000296859 TTBK1Q5TCY1 1321 aaPredicted RBP6.75□□□□□ -1.33
RAPGEF6-201ENST00000296859 PELP1Q8IZL8 1130 aaKnown RBP6.69□□□□□ -1.34
RAPGEF6-201ENST00000296859 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.62□□□□□ -1.35
RAPGEF6-201ENST00000296859 HNRNPUL2Q1KMD3 747 aaKnown RBP6.62□□□□□ -1.35
RAPGEF6-201ENST00000296859 SLC4A1APQ9BWU0 796 aaKnown RBP6.6□□□□□ -1.35
RAPGEF6-201ENST00000296859 SHROOM4Q9ULL8 1493 aa6.56□□□□□ -1.36
RAPGEF6-201ENST00000296859 PLPPR3Q6T4P5 718 aa6.54□□□□□ -1.36
RAPGEF6-201ENST00000296859 ERICH6Q7L0X2 663 aa6.54□□□□□ -1.36
RAPGEF6-201ENST00000296859 GOLGB1Q14789 3259 aaKnown RBP6.53□□□□□ -1.36
RAPGEF6-201ENST00000296859 POLR3GLQ9BT43 218 aa6.52□□□□□ -1.37
RAPGEF6-201ENST00000296859 SLC24A1O60721 1099 aa6.5□□□□□ -1.37
RAPGEF6-201ENST00000296859 BCANQ96GW7 911 aa6.48□□□□□ -1.37
RAPGEF6-201ENST00000296859 CNGB1Q14028 1251 aaPredicted RBP6.46□□□□□ -1.37
RAPGEF6-201ENST00000296859 CCER1Q8TC90 406 aaPredicted RBP6.42□□□□□ -1.38
RAPGEF6-201ENST00000296859 A0A0G2JS52 829 aa6.41□□□□□ -1.38
RAPGEF6-201ENST00000296859 UBTFP17480 764 aaKnown RBP6.37□□□□□ -1.39
RAPGEF6-201ENST00000296859 BCL11AQ9H165 835 aa6.36□□□□□ -1.39
RAPGEF6-201ENST00000296859 MYO15BQ96JP2 1530 aa6.35□□□□□ -1.39
RAPGEF6-201ENST00000296859 ESF1Q9H501 851 aaKnown RBP6.35□□□□□ -1.39
RAPGEF6-201ENST00000296859 PCGF6Q9BYE7 350 aa6.34□□□□□ -1.39
RAPGEF6-201ENST00000296859 DAXXQ9UER7 740 aaPredicted RBP6.34□□□□□ -1.39
RAPGEF6-201ENST00000296859 FBLN2P98095 1184 aa6.34□□□□□ -1.4
RAPGEF6-201ENST00000296859 SCAF1Q9H7N4 1312 aaKnown RBP6.33□□□□□ -1.4
RAPGEF6-201ENST00000296859 MYT1Q01538 1121 aa6.32□□□□□ -1.4
RAPGEF6-201ENST00000296859 ITGAEP38570 1179 aa6.31□□□□□ -1.4
RAPGEF6-201ENST00000296859 UTRNP46939 3433 aa6.31□□□□□ -1.4
RAPGEF6-201ENST00000296859 NISCHQ9Y2I1 1504 aa6.3□□□□□ -1.4
RAPGEF6-201ENST00000296859 NEFLP07196 543 aa6.29□□□□□ -1.4
RAPGEF6-201ENST00000296859 PLEKHG5O94827 1062 aa6.26□□□□□ -1.41
RAPGEF6-201ENST00000296859 SENP3Q9H4L4 574 aaPredicted RBP6.26□□□□□ -1.41
RAPGEF6-201ENST00000296859 CLSPNQ9HAW4 1339 aa6.26□□□□□ -1.41
RAPGEF6-201ENST00000296859 ZBTB47Q9UFB7 747 aaPredicted RBP6.24□□□□□ -1.41
RAPGEF6-201ENST00000296859 STAG3Q9UJ98 1225 aa6.22□□□□□ -1.41
RAPGEF6-201ENST00000296859 TRIM41Q8WV44 630 aa6.19□□□□□ -1.42
RAPGEF6-201ENST00000296859 NCBP3Q53F19 620 aaKnown RBP6.18□□□□□ -1.42
RAPGEF6-201ENST00000296859 HAP1P54257 671 aaPredicted RBP6.18□□□□□ -1.42
RAPGEF6-201ENST00000296859 NPM2Q86SE8 214 aaKnown RBP6.18□□□□□ -1.42
RAPGEF6-201ENST00000296859 YTHDC1Q96MU7 727 aaKnown RBP6.18□□□□□ -1.42
RAPGEF6-201ENST00000296859 PCNTO95613 3336 aa6.18□□□□□ -1.42
RAPGEF6-201ENST00000296859 PHF23Q9BUL5 403 aaPredicted RBP6.17□□□□□ -1.42
RAPGEF6-201ENST00000296859 NEFMP07197 916 aa6.16□□□□□ -1.42
RAPGEF6-201ENST00000296859 ZBTB7CA1YPR0 619 aa6.16□□□□□ -1.42
RAPGEF6-201ENST00000296859 C14orf37Q86TY3 774 aa6.15□□□□□ -1.42
RAPGEF6-201ENST00000296859 NPM1P06748 294 aaKnown RBP eCLIP6.15□□□□□ -1.42
RAPGEF6-201ENST00000296859 TULP1O00294 542 aaPredicted RBP6.14□□□□□ -1.43
RAPGEF6-201ENST00000296859 ZNF326Q5BKZ1 582 aaKnown RBP6.14□□□□□ -1.43
RAPGEF6-201ENST00000296859 PPARGC1BQ86YN6 1023 aaKnown RBP6.13□□□□□ -1.43
RAPGEF6-201ENST00000296859 TRHP20396 242 aaPredicted RBP6.13□□□□□ -1.43
RAPGEF6-201ENST00000296859 CHGAP10645 457 aaKnown RBP6.13□□□□□ -1.43
RAPGEF6-201ENST00000296859 ZNF316A6NFI3 1004 aaPredicted RBP6.12□□□□□ -1.43
RAPGEF6-201ENST00000296859 TRIM52Q96A61 297 aa6.11□□□□□ -1.43
RAPGEF6-201ENST00000296859 ARID3CA6NKF2 412 aa6.11□□□□□ -1.43
RAPGEF6-201ENST00000296859 NPHP1O15259 732 aa6.1□□□□□ -1.43
RAPGEF6-201ENST00000296859 ARXQ96QS3 562 aa6.1□□□□□ -1.43
RAPGEF6-201ENST00000296859 CENPFP49454 3210 aa6.09□□□□□ -1.43
RAPGEF6-201ENST00000296859 CENPBP07199 599 aaPredicted RBP6.09□□□□□ -1.43
RAPGEF6-201ENST00000296859 CDK11BP21127 795 aaKnown RBP6.08□□□□□ -1.44
RAPGEF6-201ENST00000296859 CDK11AQ9UQ88 783 aaPredicted RBP6.08□□□□□ -1.44
RAPGEF6-201ENST00000296859 ARID4BQ4LE39 1312 aaPredicted RBP6.07□□□□□ -1.44
RAPGEF6-201ENST00000296859 CANXP27824 592 aaKnown RBP6.07□□□□□ -1.44
RAPGEF6-201ENST00000296859 EP400Q96L91 3159 aa6.05□□□□□ -1.44
RAPGEF6-201ENST00000296859 KRI1Q8N9T8 703 aaKnown RBP6.05□□□□□ -1.44
RAPGEF6-201ENST00000296859 FAM50AQ14320 339 aaKnown RBP6.04□□□□□ -1.44
RAPGEF6-201ENST00000296859 ZNF777Q9ULD5 760 aaPredicted RBP6.02□□□□□ -1.44
RAPGEF6-201ENST00000296859 PABPN1Q86U42 306 aaKnown RBP eCLIP6.01□□□□□ -1.45
RAPGEF6-201ENST00000296859 LMOD2Q6P5Q4 547 aa6.01□□□□□ -1.45
RAPGEF6-201ENST00000296859 DCAF8L1A6NGE4 600 aa6□□□□□ -1.45
RAPGEF6-201ENST00000296859 PPP1R15AO75807 674 aaPredicted RBP5.97□□□□□ -1.45
RAPGEF6-201ENST00000296859 CLSTN1O94985 981 aa5.95□□□□□ -1.46
RAPGEF6-201ENST00000296859 PRM3Q9NNZ6 103 aa5.94□□□□□ -1.46
RAPGEF6-201ENST00000296859 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.93□□□□□ -1.46
RAPGEF6-201ENST00000296859 NEUROD1Q13562 356 aa5.93□□□□□ -1.46
RAPGEF6-201ENST00000296859 CCDC9Q9Y3X0 531 aaKnown RBP5.92□□□□□ -1.46
RAPGEF6-201ENST00000296859 RTL5Q5HYW3 569 aaPredicted RBP5.92□□□□□ -1.46
RAPGEF6-201ENST00000296859 ISY1Q9ULR0 285 aaKnown RBP5.92□□□□□ -1.46
RAPGEF6-201ENST00000296859 WDFY3Q8IZQ1 3526 aa5.9□□□□□ -1.46
RAPGEF6-201ENST00000296859 KLHL34Q8N239 644 aa5.9□□□□□ -1.46
RAPGEF6-201ENST00000296859 TAOK2Q9UL54 1235 aa5.9□□□□□ -1.46
RAPGEF6-201ENST00000296859 GOLGA2Q08379 1002 aa5.9□□□□□ -1.47
RAPGEF6-201ENST00000296859 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.9□□□□□ -1.471e-6■■□□□ 13.7
RAPGEF6-201ENST00000296859 P3H3Q8IVL6 736 aa5.89□□□□□ -1.47
RAPGEF6-201ENST00000296859 VCANP13611 3396 aa5.89□□□□□ -1.47
RAPGEF6-201ENST00000296859 HSP90AA1P07900 732 aaKnown RBP5.87□□□□□ -1.47
RAPGEF6-201ENST00000296859 FKBP8Q14318 412 aa5.86□□□□□ -1.47
RAPGEF6-201ENST00000296859 ZEB1P37275 1124 aaPredicted RBP5.85□□□□□ -1.47
RAPGEF6-201ENST00000296859 TMX4Q9H1E5 349 aaPredicted RBP5.85□□□□□ -1.47
RAPGEF6-201ENST00000296859 MLECQ14165 292 aa5.83□□□□□ -1.48
RAPGEF6-201ENST00000296859 MSH5O43196 834 aa5.82□□□□□ -1.48
RAPGEF6-201ENST00000296859 KCNH8Q96L42 1107 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms