RNA–Protein interactions for RNA: ENST00000522875.5

PVT1-214, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 922 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-214ENST00000522875 AEBP2Q6ZN18 517 aaPredicted RBP27.56■■■□□ 2
PVT1-214ENST00000522875 CHIC1Q5VXU3 224 aa27.14■■□□□ 1.94
PVT1-214ENST00000522875 PHF23Q9BUL5 403 aaPredicted RBP23.98■■□□□ 1.43
PVT1-214ENST00000522875 SENP3Q9H4L4 574 aaPredicted RBP23.23■■□□□ 1.31
PVT1-214ENST00000522875 PLPPR3Q6T4P5 718 aa22.16■■□□□ 1.14
PVT1-214ENST00000522875 FOXD1Q16676 465 aa21.59■■□□□ 1.05
PVT1-214ENST00000522875 PPP6R1Q9UPN7 881 aa21.07■□□□□ 0.96
PVT1-214ENST00000522875 ADRA2BP18089 450 aa21.05■□□□□ 0.96
PVT1-214ENST00000522875 PIAS4Q8N2W9 510 aaPredicted RBP20.42■□□□□ 0.86
PVT1-214ENST00000522875 MSH5O43196 834 aa19.71■□□□□ 0.75
PVT1-214ENST00000522875 PPP4R3CPQ6ZMV5 832 aa19.6■□□□□ 0.73
PVT1-214ENST00000522875 KCNA4P22459 653 aa19.54■□□□□ 0.72
PVT1-214ENST00000522875 SCAF1Q9H7N4 1312 aaKnown RBP19.14■□□□□ 0.65
PVT1-214ENST00000522875 NCBP3Q53F19 620 aaKnown RBP19.1■□□□□ 0.65
PVT1-214ENST00000522875 MAPK8IP2Q13387 824 aaPredicted RBP19.04■□□□□ 0.64
PVT1-214ENST00000522875 CNKSR2Q8WXI2 1034 aa18.95■□□□□ 0.62
PVT1-214ENST00000522875 NPM3O75607 178 aaKnown RBP18.91■□□□□ 0.62
PVT1-214ENST00000522875 SLC4A1APQ9BWU0 796 aaKnown RBP18.62■□□□□ 0.57
PVT1-214ENST00000522875 DMRT2Q9Y5R5 561 aa18.61■□□□□ 0.57
PVT1-214ENST00000522875 EHMT2Q96KQ7 1210 aa18.51■□□□□ 0.55
PVT1-214ENST00000522875 RNF216Q9NWF9 866 aaPredicted RBP18.5■□□□□ 0.55
PVT1-214ENST00000522875 HOXD11P31277 338 aaPredicted RBP18.35■□□□□ 0.53
PVT1-214ENST00000522875 DNAJC5BQ9UF47 199 aa18.22■□□□□ 0.51
PVT1-214ENST00000522875 CSRNP3Q8WYN3 585 aa18.14■□□□□ 0.49
PVT1-214ENST00000522875 ZBTB22O15209 634 aa18.01■□□□□ 0.47
PVT1-214ENST00000522875 DCAF8L1A6NGE4 600 aa17.83■□□□□ 0.44
PVT1-214ENST00000522875 FOXD4L1Q9NU39 408 aa17.83■□□□□ 0.44
PVT1-214ENST00000522875 SLC4A2P04920 1241 aa17.8■□□□□ 0.44
PVT1-214ENST00000522875 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.49■□□□□ 0.393e-6■□□□□ 10.5
PVT1-214ENST00000522875 POTEDQ86YR6 584 aa17.47■□□□□ 0.39
PVT1-214ENST00000522875 MYCNP04198 464 aaPredicted RBP17.41■□□□□ 0.38
PVT1-214ENST00000522875 U3KPZ7 1027 aaPredicted RBP17.28■□□□□ 0.36
PVT1-214ENST00000522875 ATXN8OSP0DMR3 200 aa17.14■□□□□ 0.33
PVT1-214ENST00000522875 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.06■□□□□ 0.32
PVT1-214ENST00000522875 HNRNPUL2Q1KMD3 747 aaKnown RBP17.06■□□□□ 0.32
PVT1-214ENST00000522875 SAMD1Q6SPF0 538 aaPredicted RBP17.04■□□□□ 0.32
PVT1-214ENST00000522875 ATF5Q9Y2D1 282 aaPredicted RBP17.03■□□□□ 0.32
PVT1-214ENST00000522875 RNF39Q9H2S5 420 aa16.96■□□□□ 0.31
PVT1-214ENST00000522875 APLP2Q06481 763 aa16.78■□□□□ 0.28
PVT1-214ENST00000522875 SPINK5Q9NQ38 1064 aaPredicted RBP16.74■□□□□ 0.27
PVT1-214ENST00000522875 C1QBPQ07021 282 aaKnown RBP16.73■□□□□ 0.27
PVT1-214ENST00000522875 ZNF219Q9P2Y4 722 aaPredicted RBP16.67■□□□□ 0.26
PVT1-214ENST00000522875 TRHP20396 242 aaPredicted RBP16.63■□□□□ 0.25
PVT1-214ENST00000522875 CAPN15O75808 1086 aa16.61■□□□□ 0.25
PVT1-214ENST00000522875 POLA2Q14181 598 aa16.43■□□□□ 0.22
PVT1-214ENST00000522875 FKBP8Q14318 412 aa16.37■□□□□ 0.21
PVT1-214ENST00000522875 ABCB7O75027 752 aa16.35■□□□□ 0.21
PVT1-214ENST00000522875 CACNB1Q02641 598 aaPredicted RBP16.29■□□□□ 0.2
PVT1-214ENST00000522875 MKRN4PQ13434 485 aaPredicted RBP16.28■□□□□ 0.2
PVT1-214ENST00000522875 DSG3P32926 999 aa16.27■□□□□ 0.2
PVT1-214ENST00000522875 FBLN2P98095 1184 aa16.17■□□□□ 0.18
PVT1-214ENST00000522875 ZBTB12Q9Y330 459 aaPredicted RBP16.06■□□□□ 0.16
PVT1-214ENST00000522875 SPDYE4A6NLX3 237 aa16.02■□□□□ 0.16
PVT1-214ENST00000522875 OSCARQ8IYS5 282 aa15.86■□□□□ 0.13
PVT1-214ENST00000522875 PROM2Q8N271 834 aa15.79■□□□□ 0.12
PVT1-214ENST00000522875 ZNF692Q9BU19 519 aaPredicted RBP15.73■□□□□ 0.11
PVT1-214ENST00000522875 SPDYE2BA6NHP3 402 aa15.7■□□□□ 0.1
PVT1-214ENST00000522875 SPDYE6P0CI01 402 aa15.7■□□□□ 0.1
PVT1-214ENST00000522875 SPDYE2Q495Y8 402 aa15.7■□□□□ 0.1
PVT1-214ENST00000522875 SSUH2Q9Y2M2 353 aa15.64■□□□□ 0.09
PVT1-214ENST00000522875 FBXO3Q9UK99 471 aa15.61■□□□□ 0.09
PVT1-214ENST00000522875 PABPN1Q86U42 306 aaKnown RBP eCLIP15.55■□□□□ 0.08
PVT1-214ENST00000522875 RTN4Q9NQC3 1192 aaKnown RBP15.45■□□□□ 0.06
PVT1-214ENST00000522875 VASPP50552 380 aaPredicted RBP15.44■□□□□ 0.06
PVT1-214ENST00000522875 NISCHQ9Y2I1 1504 aa15.42■□□□□ 0.06
PVT1-214ENST00000522875 RBM42Q9BTD8 480 aaKnown RBP15.41■□□□□ 0.06
PVT1-214ENST00000522875 AMER1Q5JTC6 1135 aaPredicted RBP15.4■□□□□ 0.06
PVT1-214ENST00000522875 AKT1S1Q96B36 256 aa15.32■□□□□ 0.04
PVT1-214ENST00000522875 IFNLR1Q8IU57 520 aaPredicted RBP15.31■□□□□ 0.04
PVT1-214ENST00000522875 STAG3Q9UJ98 1225 aa15.3■□□□□ 0.04
PVT1-214ENST00000522875 REM2Q8IYK8 340 aaPredicted RBP15.21■□□□□ 0.03
PVT1-214ENST00000522875 MIER1Q8N108 512 aa15.16■□□□□ 0.02
PVT1-214ENST00000522875 PLCD3Q8N3E9 789 aa15.16■□□□□ 0.02
PVT1-214ENST00000522875 SPDYE1Q8NFV5 336 aaPredicted RBP15.16■□□□□ 0.02
PVT1-214ENST00000522875 CLEC11AQ9Y240 323 aa15.15■□□□□ 0.02
PVT1-214ENST00000522875 KLHL34Q8N239 644 aa15.11■□□□□ 0.01
PVT1-214ENST00000522875 PITPNM1O00562 1244 aa15.04■□□□□ -0
PVT1-214ENST00000522875 PRR29P0C7W0 189 aa15.02■□□□□ -0
PVT1-214ENST00000522875 SPOCK2Q92563 424 aa15□□□□□ -0.01
PVT1-214ENST00000522875 PLEKHG5O94827 1062 aa14.99□□□□□ -0.01
PVT1-214ENST00000522875 CREBZFQ9NS37 354 aa14.93□□□□□ -0.02
PVT1-214ENST00000522875 PKD2Q13563 968 aa14.91□□□□□ -0.02
PVT1-214ENST00000522875 ZBTB47Q9UFB7 747 aaPredicted RBP14.9□□□□□ -0.02
PVT1-214ENST00000522875 MNX1P50219 401 aaPredicted RBP14.82□□□□□ -0.04
PVT1-214ENST00000522875 CHADLQ6NUI6 762 aa14.78□□□□□ -0.04
PVT1-214ENST00000522875 CIZ1Q9ULV3 898 aaPredicted RBP14.76□□□□□ -0.05
PVT1-214ENST00000522875 NUBP1P53384 320 aa14.75□□□□□ -0.05
PVT1-214ENST00000522875 ECM2O94769 699 aaPredicted RBP14.73□□□□□ -0.05
PVT1-214ENST00000522875 CHRDL2Q6WN34 429 aa14.7□□□□□ -0.06
PVT1-214ENST00000522875 FXR2P51116 673 aaKnown RBP eCLIP14.68□□□□□ -0.06
PVT1-214ENST00000522875 DCAF8L2P0C7V8 631 aa14.66□□□□□ -0.06
PVT1-214ENST00000522875 PRKAR2AP13861 404 aaKnown RBP14.66□□□□□ -0.06
PVT1-214ENST00000522875 RASEFQ8IZ41 740 aa14.64□□□□□ -0.07
PVT1-214ENST00000522875 DCAF8Q5TAQ9 597 aa14.63□□□□□ -0.07
PVT1-214ENST00000522875 NPM1P06748 294 aaKnown RBP eCLIP14.62□□□□□ -0.07
PVT1-214ENST00000522875 GSE1Q14687 1217 aa14.62□□□□□ -0.07
PVT1-214ENST00000522875 FARP1Q9Y4F1 1045 aaPredicted RBP14.62□□□□□ -0.07
PVT1-214ENST00000522875 RGL2O15211 777 aa14.61□□□□□ -0.07
PVT1-214ENST00000522875 PIP4P2Q8N4L2 257 aa14.6□□□□□ -0.07
PVT1-214ENST00000522875 FAM212AQ96EL1 285 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms