RNA–Protein interactions for RNA: ENST00000379938.6

RREB1-204, Transcript of ras responsive element binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RREB1, Length 8,778 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RREB1-204ENST00000379938 PELP1Q8IZL8 1130 aaKnown RBP26.55■■□□□ 1.84
RREB1-204ENST00000379938 DCAF8L2P0C7V8 631 aa25.63■■□□□ 1.69
RREB1-204ENST00000379938 MYT1Q01538 1121 aa25.56■■□□□ 1.68
RREB1-204ENST00000379938 CCER1Q8TC90 406 aaPredicted RBP25.22■■□□□ 1.63
RREB1-204ENST00000379938 ERICH6Q7L0X2 663 aa25.14■■□□□ 1.62
RREB1-204ENST00000379938 CENPBP07199 599 aaPredicted RBP24.56■■□□□ 1.52
RREB1-204ENST00000379938 YTHDC1Q96MU7 727 aaKnown RBP24.51■■□□□ 1.51
RREB1-204ENST00000379938 FAM9AQ8IZU1 332 aaPredicted RBP24.5■■□□□ 1.51
RREB1-204ENST00000379938 APLP2Q06481 763 aa24.5■■□□□ 1.51
RREB1-204ENST00000379938 SUPT5HO00267 1087 aaKnown RBP24.34■■□□□ 1.49
RREB1-204ENST00000379938 NEFLP07196 543 aa24.11■■□□□ 1.45
RREB1-204ENST00000379938 TTBK1Q5TCY1 1321 aaPredicted RBP24.1■■□□□ 1.45
RREB1-204ENST00000379938 ZEB1P37275 1124 aaPredicted RBP23.99■■□□□ 1.43
RREB1-204ENST00000379938 DAXXQ9UER7 740 aaPredicted RBP23.87■■□□□ 1.41
RREB1-204ENST00000379938 EHMT2Q96KQ7 1210 aa23.65■■□□□ 1.38
RREB1-204ENST00000379938 SHROOM4Q9ULL8 1493 aa23.44■■□□□ 1.34
RREB1-204ENST00000379938 PCGF6Q9BYE7 350 aa23.39■■□□□ 1.33
RREB1-204ENST00000379938 RTL5Q5HYW3 569 aaPredicted RBP23.36■■□□□ 1.33
RREB1-204ENST00000379938 NISCHQ9Y2I1 1504 aa23.21■■□□□ 1.31
RREB1-204ENST00000379938 ZNF316A6NFI3 1004 aaPredicted RBP23.17■■□□□ 1.3
RREB1-204ENST00000379938 ATP1B4Q9UN42 357 aaPredicted RBP23■■□□□ 1.27
RREB1-204ENST00000379938 GLIPR1L2Q4G1C9 344 aa22.83■■□□□ 1.25
RREB1-204ENST00000379938 TRIM41Q8WV44 630 aa22.8■■□□□ 1.24
RREB1-204ENST00000379938 UBTFP17480 764 aaKnown RBP22.79■■□□□ 1.24
RREB1-204ENST00000379938 RANGAP1P46060 587 aaPredicted RBP22.74■■□□□ 1.23
RREB1-204ENST00000379938 CLSPNQ9HAW4 1339 aa22.71■■□□□ 1.23
RREB1-204ENST00000379938 MYT1LQ9UL68 1186 aa22.42■■□□□ 1.18
RREB1-204ENST00000379938 TRIM26Q12899 539 aaPredicted RBP22.39■■□□□ 1.18
RREB1-204ENST00000379938 ANP32BQ92688 251 aaKnown RBP22.38■■□□□ 1.17
RREB1-204ENST00000379938 POLR3GLQ9BT43 218 aa22.38■■□□□ 1.17
RREB1-204ENST00000379938 ZBTB47Q9UFB7 747 aaPredicted RBP22.33■■□□□ 1.17
RREB1-204ENST00000379938 HRCP23327 699 aa22.29■■□□□ 1.16
RREB1-204ENST00000379938 CDK11AQ9UQ88 783 aaPredicted RBP22.28■■□□□ 1.16
RREB1-204ENST00000379938 EIF5BO60841 1220 aaKnown RBP22.24■■□□□ 1.15
RREB1-204ENST00000379938 SLC4A1APQ9BWU0 796 aaKnown RBP22.22■■□□□ 1.15
RREB1-204ENST00000379938 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.14■■□□□ 1.14
RREB1-204ENST00000379938 HNRNPUL2Q1KMD3 747 aaKnown RBP22.14■■□□□ 1.14
RREB1-204ENST00000379938 ANP32AP39687 249 aaKnown RBP22.13■■□□□ 1.13
RREB1-204ENST00000379938 DIEXFQ68CQ4 756 aaKnown RBP21.99■■□□□ 1.11
RREB1-204ENST00000379938 ITGAEP38570 1179 aa21.98■■□□□ 1.11
RREB1-204ENST00000379938 NEFMP07197 916 aa21.94■■□□□ 1.1
RREB1-204ENST00000379938 TNNT2P45379 298 aaPredicted RBP21.9■■□□□ 1.1
RREB1-204ENST00000379938 CNGB1Q14028 1251 aaPredicted RBP21.85■■□□□ 1.09
RREB1-204ENST00000379938 CANXP27824 592 aaKnown RBP21.82■■□□□ 1.08
RREB1-204ENST00000379938 CHIC1Q5VXU3 224 aa21.78■■□□□ 1.08
RREB1-204ENST00000379938 HSP90AA1P07900 732 aaKnown RBP21.78■■□□□ 1.08
RREB1-204ENST00000379938 PPARGC1BQ86YN6 1023 aaKnown RBP21.77■■□□□ 1.08
RREB1-204ENST00000379938 ANP32CO43423 234 aa21.76■■□□□ 1.07
RREB1-204ENST00000379938 UPF2Q9HAU5 1272 aaKnown RBP21.75■■□□□ 1.07
RREB1-204ENST00000379938 GTF3C3Q9Y5Q9 886 aa21.74■■□□□ 1.07
RREB1-204ENST00000379938 CDK11BP21127 795 aaKnown RBP21.67■■□□□ 1.06
RREB1-204ENST00000379938 BCANQ96GW7 911 aa21.64■■□□□ 1.05
RREB1-204ENST00000379938 SLC24A1O60721 1099 aa21.6■■□□□ 1.05
RREB1-204ENST00000379938 TRIM44Q96DX7 344 aaPredicted RBP21.57■■□□□ 1.04
RREB1-204ENST00000379938 TRIM52Q96A61 297 aa21.53■■□□□ 1.04
RREB1-204ENST00000379938 FAM50AQ14320 339 aaKnown RBP21.51■■□□□ 1.03
RREB1-204ENST00000379938 ANP32EQ9BTT0 268 aa21.51■■□□□ 1.03
RREB1-204ENST00000379938 NPM2Q86SE8 214 aaKnown RBP21.46■■□□□ 1.03
RREB1-204ENST00000379938 NCLP19338 710 aaKnown RBP21.37■■□□□ 1.01
RREB1-204ENST00000379938 BCL11AQ9H165 835 aa21.32■■□□□ 1
RREB1-204ENST00000379938 NEUROD1Q13562 356 aa21.32■■□□□ 1
RREB1-204ENST00000379938 ACIN1Q9UKV3 1341 aaKnown RBP21.31■■□□□ 1
RREB1-204ENST00000379938 ZNF326Q5BKZ1 582 aaKnown RBP21.28■■□□□ 1
RREB1-204ENST00000379938 ERICH6BQ5W0A0 696 aa21.21■□□□□ 0.99
RREB1-204ENST00000379938 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.21■□□□□ 0.99
RREB1-204ENST00000379938 NBR1Q14596 966 aa21.2■□□□□ 0.98
RREB1-204ENST00000379938 GOLGA6L22H0YM25 854 aa21.19■□□□□ 0.98
RREB1-204ENST00000379938 BECN1Q14457 450 aa21.16■□□□□ 0.98
RREB1-204ENST00000379938 DDRGK1Q96HY6 314 aa21.16■□□□□ 0.98
RREB1-204ENST00000379938 LOC105371045A0A1W2PR82 267 aa21.09■□□□□ 0.97
RREB1-204ENST00000379938 ZRSR1Q15695 479 aaKnown RBP21.08■□□□□ 0.97
RREB1-204ENST00000379938 DNTTIP2Q5QJE6 756 aaKnown RBP21.07■□□□□ 0.96
RREB1-204ENST00000379938 ARXQ96QS3 562 aa21.07■□□□□ 0.96
RREB1-204ENST00000379938 MYH16Q9H6N6 1097 aa21.06■□□□□ 0.96
RREB1-204ENST00000379938 PTMAP06454 111 aaKnown RBP21.04■□□□□ 0.96
RREB1-204ENST00000379938 ESF1Q9H501 851 aaKnown RBP21.04■□□□□ 0.96
RREB1-204ENST00000379938 GOLGA6L6A8MZA4 724 aa21.03■□□□□ 0.96
RREB1-204ENST00000379938 FKBP8Q14318 412 aa21.02■□□□□ 0.96
RREB1-204ENST00000379938 CCDC136Q96JN2 1154 aa21■□□□□ 0.95
RREB1-204ENST00000379938 NRDCO43847 1150 aa20.96■□□□□ 0.95
RREB1-204ENST00000379938 NAP1L5Q96NT1 182 aaPredicted RBP20.96■□□□□ 0.95
RREB1-204ENST00000379938 CHAF1AQ13111 956 aaPredicted RBP20.95■□□□□ 0.94
RREB1-204ENST00000379938 L1TD1Q5T7N2 865 aaKnown RBP20.89■□□□□ 0.93
RREB1-204ENST00000379938 TONSLQ96HA7 1378 aa20.88■□□□□ 0.93
RREB1-204ENST00000379938 STAG3Q9UJ98 1225 aa20.84■□□□□ 0.93
RREB1-204ENST00000379938 PPM1GO15355 546 aaPredicted RBP20.82■□□□□ 0.92
RREB1-204ENST00000379938 HNRNPUQ00839 825 aaKnown RBP eCLIP20.81■□□□□ 0.929e-6■□□□□ 8.1
RREB1-204ENST00000379938 WDR43Q15061 677 aaKnown RBP eCLIP20.81■□□□□ 0.92
RREB1-204ENST00000379938 CASC1Q6TDU7 716 aa20.79■□□□□ 0.92
RREB1-204ENST00000379938 TMC1Q8TDI8 760 aa20.79■□□□□ 0.92
RREB1-204ENST00000379938 TNNT3P45378 269 aaPredicted RBP20.71■□□□□ 0.91
RREB1-204ENST00000379938 FBLN2P98095 1184 aa20.68■□□□□ 0.9
RREB1-204ENST00000379938 CALRP27797 417 aaKnown RBP20.68■□□□□ 0.9
RREB1-204ENST00000379938 MSNP26038 577 aaKnown RBP20.67■□□□□ 0.9
RREB1-204ENST00000379938 USP35Q9P2H5 1018 aa20.65■□□□□ 0.9
RREB1-204ENST00000379938 FAM9BQ8IZU0 186 aa20.63■□□□□ 0.89
RREB1-204ENST00000379938 ZNF777Q9ULD5 760 aaPredicted RBP20.56■□□□□ 0.88
RREB1-204ENST00000379938 CHMP4BQ9H444 224 aaKnown RBP20.55■□□□□ 0.88
RREB1-204ENST00000379938 CHGAP10645 457 aaKnown RBP20.54■□□□□ 0.88
RREB1-204ENST00000379938 AMER1Q5JTC6 1135 aaPredicted RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms