RNA–Protein interactions for RNA: ENST00000507093.5

RAPGEF6-207, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAPGEF6, Length 5,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-207ENST00000507093 DCAF8L2P0C7V8 631 aa23.13■■□□□ 1.29
RAPGEF6-207ENST00000507093 NISCHQ9Y2I1 1504 aa21.79■■□□□ 1.08
RAPGEF6-207ENST00000507093 SUPT5HO00267 1087 aaKnown RBP21.54■■□□□ 1.04
RAPGEF6-207ENST00000507093 SHROOM4Q9ULL8 1493 aa21.24■□□□□ 0.99
RAPGEF6-207ENST00000507093 EHMT2Q96KQ7 1210 aa20.9■□□□□ 0.94
RAPGEF6-207ENST00000507093 APLP2Q06481 763 aa20.57■□□□□ 0.88
RAPGEF6-207ENST00000507093 FAM9AQ8IZU1 332 aaPredicted RBP20.54■□□□□ 0.88
RAPGEF6-207ENST00000507093 RANGAP1P46060 587 aaPredicted RBP20.14■□□□□ 0.81
RAPGEF6-207ENST00000507093 TTBK1Q5TCY1 1321 aaPredicted RBP20.12■□□□□ 0.81
RAPGEF6-207ENST00000507093 ATP1B4Q9UN42 357 aaPredicted RBP20.03■□□□□ 0.8
RAPGEF6-207ENST00000507093 TRIM41Q8WV44 630 aa19.97■□□□□ 0.79
RAPGEF6-207ENST00000507093 PELP1Q8IZL8 1130 aaKnown RBP19.86■□□□□ 0.77
RAPGEF6-207ENST00000507093 UBTFP17480 764 aaKnown RBP19.82■□□□□ 0.76
RAPGEF6-207ENST00000507093 PCGF6Q9BYE7 350 aa19.73■□□□□ 0.75
RAPGEF6-207ENST00000507093 CCER1Q8TC90 406 aaPredicted RBP19.51■□□□□ 0.71
RAPGEF6-207ENST00000507093 MYT1LQ9UL68 1186 aa19.44■□□□□ 0.7
RAPGEF6-207ENST00000507093 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.43■□□□□ 0.7
RAPGEF6-207ENST00000507093 HNRNPUL2Q1KMD3 747 aaKnown RBP19.43■□□□□ 0.7
RAPGEF6-207ENST00000507093 ZEB1P37275 1124 aaPredicted RBP19.32■□□□□ 0.68
RAPGEF6-207ENST00000507093 PPARGC1BQ86YN6 1023 aaKnown RBP19.26■□□□□ 0.67
RAPGEF6-207ENST00000507093 ABCC9O60706 1549 aa19.25■□□□□ 0.67
RAPGEF6-207ENST00000507093 PABPN1Q86U42 306 aaKnown RBP eCLIP19.2■□□□□ 0.66
RAPGEF6-207ENST00000507093 CENPBP07199 599 aaPredicted RBP19.17■□□□□ 0.66
RAPGEF6-207ENST00000507093 ITGAEP38570 1179 aa19.16■□□□□ 0.66
RAPGEF6-207ENST00000507093 CHIC1Q5VXU3 224 aa19.03■□□□□ 0.64
RAPGEF6-207ENST00000507093 ERICH6Q7L0X2 663 aa19.01■□□□□ 0.63
RAPGEF6-207ENST00000507093 POLR3GLQ9BT43 218 aa18.99■□□□□ 0.63
RAPGEF6-207ENST00000507093 NEFLP07196 543 aa18.97■□□□□ 0.63
RAPGEF6-207ENST00000507093 YTHDC1Q96MU7 727 aaKnown RBP18.91■□□□□ 0.62
RAPGEF6-207ENST00000507093 TRIM26Q12899 539 aaPredicted RBP18.88■□□□□ 0.61
RAPGEF6-207ENST00000507093 LOC105371045A0A1W2PR82 267 aa18.87■□□□□ 0.61
RAPGEF6-207ENST00000507093 FBLN2P98095 1184 aa18.82■□□□□ 0.6
RAPGEF6-207ENST00000507093 SLC4A1APQ9BWU0 796 aaKnown RBP18.78■□□□□ 0.6
RAPGEF6-207ENST00000507093 CNGB1Q14028 1251 aaPredicted RBP18.75■□□□□ 0.59
RAPGEF6-207ENST00000507093 FAM50AQ14320 339 aaKnown RBP18.7■□□□□ 0.58
RAPGEF6-207ENST00000507093 TRIM52Q96A61 297 aa18.63■□□□□ 0.57
RAPGEF6-207ENST00000507093 HRCP23327 699 aa18.45■□□□□ 0.54
RAPGEF6-207ENST00000507093 DAXXQ9UER7 740 aaPredicted RBP18.45■□□□□ 0.54
RAPGEF6-207ENST00000507093 ARID3CA6NKF2 412 aa18.43■□□□□ 0.54
RAPGEF6-207ENST00000507093 NEUROD1Q13562 356 aa18.4■□□□□ 0.54
RAPGEF6-207ENST00000507093 P3H3Q8IVL6 736 aa18.4■□□□□ 0.54
RAPGEF6-207ENST00000507093 ZNF326Q5BKZ1 582 aaKnown RBP18.39■□□□□ 0.53
RAPGEF6-207ENST00000507093 BCANQ96GW7 911 aa18.37■□□□□ 0.53
RAPGEF6-207ENST00000507093 SCRIBQ14160 1630 aa18.29■□□□□ 0.52
RAPGEF6-207ENST00000507093 ZNF777Q9ULD5 760 aaPredicted RBP18.29■□□□□ 0.52
RAPGEF6-207ENST00000507093 ESF1Q9H501 851 aaKnown RBP18.26■□□□□ 0.51
RAPGEF6-207ENST00000507093 CDK11AQ9UQ88 783 aaPredicted RBP18.26■□□□□ 0.51
RAPGEF6-207ENST00000507093 CSRNP3Q8WYN3 585 aa18.24■□□□□ 0.51
RAPGEF6-207ENST00000507093 NPM1P06748 294 aaKnown RBP eCLIP18.24■□□□□ 0.51
RAPGEF6-207ENST00000507093 CLSPNQ9HAW4 1339 aa18.22■□□□□ 0.51
RAPGEF6-207ENST00000507093 SLC24A1O60721 1099 aa18.15■□□□□ 0.5
RAPGEF6-207ENST00000507093 PLPPR3Q6T4P5 718 aa18.13■□□□□ 0.49
RAPGEF6-207ENST00000507093 DIEXFQ68CQ4 756 aaKnown RBP18.12■□□□□ 0.49
RAPGEF6-207ENST00000507093 STAG3Q9UJ98 1225 aa18.08■□□□□ 0.49
RAPGEF6-207ENST00000507093 NEFMP07197 916 aa18.06■□□□□ 0.48
RAPGEF6-207ENST00000507093 ANP32CO43423 234 aa18.05■□□□□ 0.48
RAPGEF6-207ENST00000507093 CHGAP10645 457 aaKnown RBP18.04■□□□□ 0.48
RAPGEF6-207ENST00000507093 ZBTB47Q9UFB7 747 aaPredicted RBP18.03■□□□□ 0.48
RAPGEF6-207ENST00000507093 ZNF316A6NFI3 1004 aaPredicted RBP17.99■□□□□ 0.47
RAPGEF6-207ENST00000507093 CHMP7Q8WUX9 453 aaPredicted RBP17.98■□□□□ 0.47
RAPGEF6-207ENST00000507093 ZCCHC6Q5VYS8 1495 aaKnown RBP17.94■□□□□ 0.46
RAPGEF6-207ENST00000507093 CANXP27824 592 aaKnown RBP17.92■□□□□ 0.46
RAPGEF6-207ENST00000507093 BCL11AQ9H165 835 aa17.9■□□□□ 0.46
RAPGEF6-207ENST00000507093 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.86■□□□□ 0.451e-6■■□□□ 13.7
RAPGEF6-207ENST00000507093 RB1CC1Q8TDY2 1594 aa17.85■□□□□ 0.45
RAPGEF6-207ENST00000507093 CCDC180Q9P1Z9 1646 aa17.81■□□□□ 0.44
RAPGEF6-207ENST00000507093 TSPY4P0CV99 314 aa17.81■□□□□ 0.44
RAPGEF6-207ENST00000507093 TSPY10P0CW01 314 aa17.81■□□□□ 0.44
RAPGEF6-207ENST00000507093 CHIC2Q9UKJ5 165 aa17.81■□□□□ 0.44
RAPGEF6-207ENST00000507093 RTL5Q5HYW3 569 aaPredicted RBP17.77■□□□□ 0.44
RAPGEF6-207ENST00000507093 TONSLQ96HA7 1378 aa17.76■□□□□ 0.43
RAPGEF6-207ENST00000507093 MYT1Q01538 1121 aa17.73■□□□□ 0.43
RAPGEF6-207ENST00000507093 KCNH8Q96L42 1107 aa17.73■□□□□ 0.43
RAPGEF6-207ENST00000507093 MTUS2Q5JR59 1369 aa17.72■□□□□ 0.43
RAPGEF6-207ENST00000507093 SCAF1Q9H7N4 1312 aaKnown RBP17.66■□□□□ 0.42
RAPGEF6-207ENST00000507093 PLEKHD1A6NEE1 506 aa17.64■□□□□ 0.41
RAPGEF6-207ENST00000507093 KDM2AQ9Y2K7 1162 aa17.62■□□□□ 0.41
RAPGEF6-207ENST00000507093 ERCC6Q03468 1493 aa17.61■□□□□ 0.41
RAPGEF6-207ENST00000507093 PPP1R15AO75807 674 aaPredicted RBP17.6■□□□□ 0.41
RAPGEF6-207ENST00000507093 ARID4BQ4LE39 1312 aaPredicted RBP17.59■□□□□ 0.41
RAPGEF6-207ENST00000507093 BAZ1BQ9UIG0 1483 aaKnown RBP17.59■□□□□ 0.41
RAPGEF6-207ENST00000507093 NACADO15069 1562 aa17.57■□□□□ 0.4
RAPGEF6-207ENST00000507093 SENP3Q9H4L4 574 aaPredicted RBP17.56■□□□□ 0.4
RAPGEF6-207ENST00000507093 C14orf37Q86TY3 774 aa17.55■□□□□ 0.4
RAPGEF6-207ENST00000507093 A0A0G2JS52 829 aa17.54■□□□□ 0.4
RAPGEF6-207ENST00000507093 CLIP1P30622 1438 aa17.52■□□□□ 0.4
RAPGEF6-207ENST00000507093 PLEKHG5O94827 1062 aa17.51■□□□□ 0.39
RAPGEF6-207ENST00000507093 RRP7BPQ9NSQ0 103 aa17.51■□□□□ 0.39
RAPGEF6-207ENST00000507093 ZBTB7CA1YPR0 619 aa17.48■□□□□ 0.39
RAPGEF6-207ENST00000507093 GTF3C3Q9Y5Q9 886 aa17.48■□□□□ 0.39
RAPGEF6-207ENST00000507093 RSF1Q96T23 1441 aaPredicted RBP17.48■□□□□ 0.39
RAPGEF6-207ENST00000507093 DDX10Q13206 875 aaKnown RBP17.48■□□□□ 0.39
RAPGEF6-207ENST00000507093 SALL2Q9Y467 1007 aaPredicted RBP17.48■□□□□ 0.39
RAPGEF6-207ENST00000507093 FAM9BQ8IZU0 186 aa17.48■□□□□ 0.39
RAPGEF6-207ENST00000507093 TMC1Q8TDI8 760 aa17.46■□□□□ 0.38
RAPGEF6-207ENST00000507093 WDR43Q15061 677 aaKnown RBP eCLIP17.45■□□□□ 0.38
RAPGEF6-207ENST00000507093 WRNQ14191 1432 aaPredicted RBP eCLIP17.44■□□□□ 0.38
RAPGEF6-207ENST00000507093 CFDP1Q9UEE9 299 aaPredicted RBP17.44■□□□□ 0.38
RAPGEF6-207ENST00000507093 NPM2Q86SE8 214 aaKnown RBP17.43■□□□□ 0.38
RAPGEF6-207ENST00000507093 HNRNPUQ00839 825 aaKnown RBP eCLIP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms