RNA–Protein interactions for RNA: ENST00000510071.5

RAPGEF6-209, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF6, Length 3,107 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-209ENST00000510071 NISCHQ9Y2I1 1504 aa20.27■□□□□ 0.84
RAPGEF6-209ENST00000510071 HRCP23327 699 aa18.69■□□□□ 0.58
RAPGEF6-209ENST00000510071 PPARGC1BQ86YN6 1023 aaKnown RBP18.42■□□□□ 0.54
RAPGEF6-209ENST00000510071 SUPT5HO00267 1087 aaKnown RBP18.4■□□□□ 0.54
RAPGEF6-209ENST00000510071 PCGF6Q9BYE7 350 aa18.4■□□□□ 0.54
RAPGEF6-209ENST00000510071 SHROOM4Q9ULL8 1493 aa18.39■□□□□ 0.53
RAPGEF6-209ENST00000510071 PELP1Q8IZL8 1130 aaKnown RBP18.17■□□□□ 0.5
RAPGEF6-209ENST00000510071 MYO15BQ96JP2 1530 aa18.05■□□□□ 0.48
RAPGEF6-209ENST00000510071 CHIC1Q5VXU3 224 aa17.98■□□□□ 0.47
RAPGEF6-209ENST00000510071 SCAF1Q9H7N4 1312 aaKnown RBP17.77■□□□□ 0.44
RAPGEF6-209ENST00000510071 LOC105371045A0A1W2PR82 267 aa17.69■□□□□ 0.42
RAPGEF6-209ENST00000510071 TRIM26Q12899 539 aaPredicted RBP17.66■□□□□ 0.42
RAPGEF6-209ENST00000510071 DCAF1Q9Y4B6 1507 aa17.62■□□□□ 0.41
RAPGEF6-209ENST00000510071 ZEB1P37275 1124 aaPredicted RBP17.53■□□□□ 0.4
RAPGEF6-209ENST00000510071 MYT1Q01538 1121 aa17.47■□□□□ 0.39
RAPGEF6-209ENST00000510071 CCDC180Q9P1Z9 1646 aa17.38■□□□□ 0.37
RAPGEF6-209ENST00000510071 DCAF8L2P0C7V8 631 aa17.34■□□□□ 0.37
RAPGEF6-209ENST00000510071 ACIN1Q9UKV3 1341 aaKnown RBP17.31■□□□□ 0.36
RAPGEF6-209ENST00000510071 NEUROD1Q13562 356 aa17.28■□□□□ 0.36
RAPGEF6-209ENST00000510071 GTF3C3Q9Y5Q9 886 aa17.24■□□□□ 0.35
RAPGEF6-209ENST00000510071 ZCCHC6Q5VYS8 1495 aaKnown RBP17.23■□□□□ 0.35
RAPGEF6-209ENST00000510071 CENPBP07199 599 aaPredicted RBP17.13■□□□□ 0.33
RAPGEF6-209ENST00000510071 EHMT2Q96KQ7 1210 aa17.1■□□□□ 0.33
RAPGEF6-209ENST00000510071 FAM9AQ8IZU1 332 aaPredicted RBP17.07■□□□□ 0.32
RAPGEF6-209ENST00000510071 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.01■□□□□ 0.31
RAPGEF6-209ENST00000510071 DIEXFQ68CQ4 756 aaKnown RBP17.01■□□□□ 0.31
RAPGEF6-209ENST00000510071 CCER1Q8TC90 406 aaPredicted RBP16.99■□□□□ 0.31
RAPGEF6-209ENST00000510071 TRIM41Q8WV44 630 aa16.94■□□□□ 0.3
RAPGEF6-209ENST00000510071 YTHDC1Q96MU7 727 aaKnown RBP16.88■□□□□ 0.29
RAPGEF6-209ENST00000510071 TTBK1Q5TCY1 1321 aaPredicted RBP16.71■□□□□ 0.26
RAPGEF6-209ENST00000510071 ZNF316A6NFI3 1004 aaPredicted RBP16.61■□□□□ 0.25
RAPGEF6-209ENST00000510071 MIER1Q8N108 512 aa16.54■□□□□ 0.24
RAPGEF6-209ENST00000510071 RSF1Q96T23 1441 aaPredicted RBP16.44■□□□□ 0.22
RAPGEF6-209ENST00000510071 BCL11AQ9H165 835 aa16.43■□□□□ 0.22
RAPGEF6-209ENST00000510071 ABCC9O60706 1549 aa16.37■□□□□ 0.21
RAPGEF6-209ENST00000510071 RB1CC1Q8TDY2 1594 aa16.37■□□□□ 0.21
RAPGEF6-209ENST00000510071 ANP32EQ9BTT0 268 aa16.36■□□□□ 0.21
RAPGEF6-209ENST00000510071 SUPT16HQ9Y5B9 1047 aaKnown RBP16.32■□□□□ 0.2
RAPGEF6-209ENST00000510071 TSHZ2Q9NRE2 1034 aa16.27■□□□□ 0.2
RAPGEF6-209ENST00000510071 HNRNPUL2Q1KMD3 747 aaKnown RBP16.25■□□□□ 0.19
RAPGEF6-209ENST00000510071 CSRNP3Q8WYN3 585 aa16.23■□□□□ 0.19
RAPGEF6-209ENST00000510071 CLSPNQ9HAW4 1339 aa16.17■□□□□ 0.18
RAPGEF6-209ENST00000510071 CEP162Q5TB80 1403 aa16.13■□□□□ 0.17
RAPGEF6-209ENST00000510071 WRNQ14191 1432 aaPredicted RBP eCLIP16.12■□□□□ 0.17
RAPGEF6-209ENST00000510071 UBTFP17480 764 aaKnown RBP16.12■□□□□ 0.17
RAPGEF6-209ENST00000510071 BCANQ96GW7 911 aa16.12■□□□□ 0.17
RAPGEF6-209ENST00000510071 SCRIBQ14160 1630 aa16.12■□□□□ 0.17
RAPGEF6-209ENST00000510071 TNIKQ9UKE5 1360 aa15.97■□□□□ 0.15
RAPGEF6-209ENST00000510071 CECR2Q9BXF3 1484 aa15.96■□□□□ 0.14
RAPGEF6-209ENST00000510071 FKBP8Q14318 412 aa15.95■□□□□ 0.14
RAPGEF6-209ENST00000510071 CCDC88BA6NC98 1476 aa15.92■□□□□ 0.14
RAPGEF6-209ENST00000510071 RBM19Q9Y4C8 960 aaKnown RBP15.91■□□□□ 0.14
RAPGEF6-209ENST00000510071 SOGA1O94964 1423 aa15.91■□□□□ 0.14
RAPGEF6-209ENST00000510071 APLP2Q06481 763 aa15.9■□□□□ 0.14
RAPGEF6-209ENST00000510071 KCNH8Q96L42 1107 aa15.9■□□□□ 0.14
RAPGEF6-209ENST00000510071 MROH2BQ7Z745 1585 aa15.9■□□□□ 0.14
RAPGEF6-209ENST00000510071 ABCC8Q09428 1581 aa15.86■□□□□ 0.13
RAPGEF6-209ENST00000510071 RANGAP1P46060 587 aaPredicted RBP15.86■□□□□ 0.13
RAPGEF6-209ENST00000510071 ITGAEP38570 1179 aa15.85■□□□□ 0.13
RAPGEF6-209ENST00000510071 NEFLP07196 543 aa15.84■□□□□ 0.13
RAPGEF6-209ENST00000510071 WIZO95785 1651 aa15.83■□□□□ 0.13
RAPGEF6-209ENST00000510071 RUSC2Q8N2Y8 1516 aa15.78■□□□□ 0.12
RAPGEF6-209ENST00000510071 ERICH6Q7L0X2 663 aa15.78■□□□□ 0.12
RAPGEF6-209ENST00000510071 PRKCSHP14314 528 aaPredicted RBP15.76■□□□□ 0.11
RAPGEF6-209ENST00000510071 GOLGA3Q08378 1498 aa15.74■□□□□ 0.11
RAPGEF6-209ENST00000510071 MSH5O43196 834 aa15.74■□□□□ 0.11
RAPGEF6-209ENST00000510071 DHX57Q6P158 1386 aaKnown RBP15.73■□□□□ 0.11
RAPGEF6-209ENST00000510071 CLIP1P30622 1438 aa15.7■□□□□ 0.1
RAPGEF6-209ENST00000510071 TRIM52Q96A61 297 aa15.7■□□□□ 0.1
RAPGEF6-209ENST00000510071 EEA1Q15075 1411 aa15.69■□□□□ 0.1
RAPGEF6-209ENST00000510071 EIF4G1Q04637 1599 aaKnown RBP15.69■□□□□ 0.1
RAPGEF6-209ENST00000510071 DDX10Q13206 875 aaKnown RBP15.68■□□□□ 0.1
RAPGEF6-209ENST00000510071 BAZ1AQ9NRL2 1556 aaPredicted RBP15.64■□□□□ 0.09
RAPGEF6-209ENST00000510071 VPS8Q8N3P4 1428 aa15.64■□□□□ 0.09
RAPGEF6-209ENST00000510071 CDK11AQ9UQ88 783 aaPredicted RBP15.58■□□□□ 0.08
RAPGEF6-209ENST00000510071 IRX6P78412 446 aaPredicted RBP15.56■□□□□ 0.08
RAPGEF6-209ENST00000510071 CEP164Q9UPV0 1460 aa15.56■□□□□ 0.08
RAPGEF6-209ENST00000510071 DEKP35659 375 aaKnown RBP15.55■□□□□ 0.08
RAPGEF6-209ENST00000510071 FANCIQ9NVI1 1328 aa15.54■□□□□ 0.08
RAPGEF6-209ENST00000510071 HIRIP3Q9BW71 556 aaPredicted RBP15.54■□□□□ 0.08
RAPGEF6-209ENST00000510071 ANP32CO43423 234 aa15.5■□□□□ 0.07
RAPGEF6-209ENST00000510071 KANK4Q5T7N3 995 aaPredicted RBP15.5■□□□□ 0.07
RAPGEF6-209ENST00000510071 NACADO15069 1562 aa15.48■□□□□ 0.07
RAPGEF6-209ENST00000510071 TOP2AP11388 1531 aaKnown RBP15.47■□□□□ 0.07
RAPGEF6-209ENST00000510071 MYT1LQ9UL68 1186 aa15.46■□□□□ 0.07
RAPGEF6-209ENST00000510071 NBR1Q14596 966 aa15.46■□□□□ 0.06
RAPGEF6-209ENST00000510071 ANO8Q9HCE9 1232 aaPredicted RBP15.45■□□□□ 0.06
RAPGEF6-209ENST00000510071 SMARCA2P51531 1590 aa15.44■□□□□ 0.06
RAPGEF6-209ENST00000510071 RAPGEF2Q9Y4G8 1499 aa15.43■□□□□ 0.06
RAPGEF6-209ENST00000510071 KIF21BO75037 1637 aa15.42■□□□□ 0.06
RAPGEF6-209ENST00000510071 SIN3AQ96ST3 1273 aa15.42■□□□□ 0.06
RAPGEF6-209ENST00000510071 PPP1R15AO75807 674 aaPredicted RBP15.42■□□□□ 0.06
RAPGEF6-209ENST00000510071 CCER2I3L3R5 266 aa15.41■□□□□ 0.06
RAPGEF6-209ENST00000510071 HNRNPUQ00839 825 aaKnown RBP eCLIP15.41■□□□□ 0.06
RAPGEF6-209ENST00000510071 RAB3GAP2Q9H2M9 1393 aa15.36■□□□□ 0.05
RAPGEF6-209ENST00000510071 CCNB3Q8WWL7 1395 aa15.36■□□□□ 0.05
RAPGEF6-209ENST00000510071 BAZ1BQ9UIG0 1483 aaKnown RBP15.34■□□□□ 0.05
RAPGEF6-209ENST00000510071 WDR97A6NE52 1622 aa15.32■□□□□ 0.04
RAPGEF6-209ENST00000510071 NOP58Q9Y2X3 529 aaKnown RBP15.32■□□□□ 0.04
RAPGEF6-209ENST00000510071 RRBP1Q9P2E9 1410 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms