RNA–Protein interactions for RNA: ENST00000509018.5

RAPGEF6-208, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RAPGEF6, Length 8,357 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-208ENST00000509018 DCAF8L2P0C7V8 631 aa13.93□□□□□ -0.18
RAPGEF6-208ENST00000509018 EHMT2Q96KQ7 1210 aa13.25□□□□□ -0.29
RAPGEF6-208ENST00000509018 SUPT5HO00267 1087 aaKnown RBP12.79□□□□□ -0.36
RAPGEF6-208ENST00000509018 SHROOM4Q9ULL8 1493 aa12.71□□□□□ -0.37
RAPGEF6-208ENST00000509018 TTBK1Q5TCY1 1321 aaPredicted RBP12.62□□□□□ -0.39
RAPGEF6-208ENST00000509018 RANGAP1P46060 587 aaPredicted RBP12.48□□□□□ -0.41
RAPGEF6-208ENST00000509018 FAM9AQ8IZU1 332 aaPredicted RBP12.34□□□□□ -0.43
RAPGEF6-208ENST00000509018 ATP1B4Q9UN42 357 aaPredicted RBP12.08□□□□□ -0.48
RAPGEF6-208ENST00000509018 PPARGC1BQ86YN6 1023 aaKnown RBP11.96□□□□□ -0.5
RAPGEF6-208ENST00000509018 CHIC1Q5VXU3 224 aa11.9□□□□□ -0.5
RAPGEF6-208ENST00000509018 CNGB1Q14028 1251 aaPredicted RBP11.8□□□□□ -0.52
RAPGEF6-208ENST00000509018 PCGF6Q9BYE7 350 aa11.74□□□□□ -0.53
RAPGEF6-208ENST00000509018 APLP2Q06481 763 aa11.71□□□□□ -0.54
RAPGEF6-208ENST00000509018 MYT1LQ9UL68 1186 aa11.67□□□□□ -0.54
RAPGEF6-208ENST00000509018 YTHDC1Q96MU7 727 aaKnown RBP11.58□□□□□ -0.56
RAPGEF6-208ENST00000509018 ITGAEP38570 1179 aa11.58□□□□□ -0.56
RAPGEF6-208ENST00000509018 POLR3GLQ9BT43 218 aa11.58□□□□□ -0.56
RAPGEF6-208ENST00000509018 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.54□□□□□ -0.56
RAPGEF6-208ENST00000509018 HNRNPUL2Q1KMD3 747 aaKnown RBP11.54□□□□□ -0.56
RAPGEF6-208ENST00000509018 NISCHQ9Y2I1 1504 aa11.5□□□□□ -0.57
RAPGEF6-208ENST00000509018 UBTFP17480 764 aaKnown RBP11.48□□□□□ -0.57
RAPGEF6-208ENST00000509018 PLPPR3Q6T4P5 718 aa11.45□□□□□ -0.58
RAPGEF6-208ENST00000509018 TRIM41Q8WV44 630 aa11.42□□□□□ -0.58
RAPGEF6-208ENST00000509018 PABPN1Q86U42 306 aaKnown RBP eCLIP11.37□□□□□ -0.59
RAPGEF6-208ENST00000509018 ARID3CA6NKF2 412 aa11.36□□□□□ -0.59
RAPGEF6-208ENST00000509018 CCER1Q8TC90 406 aaPredicted RBP11.33□□□□□ -0.6
RAPGEF6-208ENST00000509018 SLC4A1APQ9BWU0 796 aaKnown RBP11.33□□□□□ -0.6
RAPGEF6-208ENST00000509018 SENP3Q9H4L4 574 aaPredicted RBP11.26□□□□□ -0.61
RAPGEF6-208ENST00000509018 BCL11AQ9H165 835 aa11.25□□□□□ -0.61
RAPGEF6-208ENST00000509018 LOC105371045A0A1W2PR82 267 aa11.22□□□□□ -0.61
RAPGEF6-208ENST00000509018 FBLN2P98095 1184 aa11.21□□□□□ -0.62
RAPGEF6-208ENST00000509018 MYT1Q01538 1121 aa11.16□□□□□ -0.62
RAPGEF6-208ENST00000509018 ERICH6Q7L0X2 663 aa11.15□□□□□ -0.62
RAPGEF6-208ENST00000509018 PLEKHG5O94827 1062 aa11.11□□□□□ -0.63
RAPGEF6-208ENST00000509018 P3H3Q8IVL6 736 aa11.06□□□□□ -0.64
RAPGEF6-208ENST00000509018 ZNF326Q5BKZ1 582 aaKnown RBP11.04□□□□□ -0.64
RAPGEF6-208ENST00000509018 SLC24A1O60721 1099 aa11.03□□□□□ -0.64
RAPGEF6-208ENST00000509018 BCANQ96GW7 911 aa10.99□□□□□ -0.65
RAPGEF6-208ENST00000509018 NEUROD1Q13562 356 aa10.97□□□□□ -0.65
RAPGEF6-208ENST00000509018 FAM50AQ14320 339 aaKnown RBP10.97□□□□□ -0.65
RAPGEF6-208ENST00000509018 PELP1Q8IZL8 1130 aaKnown RBP10.97□□□□□ -0.65
RAPGEF6-208ENST00000509018 TRIM52Q96A61 297 aa10.96□□□□□ -0.66
RAPGEF6-208ENST00000509018 ABCC9O60706 1549 aa10.91□□□□□ -0.66
RAPGEF6-208ENST00000509018 ZNF777Q9ULD5 760 aaPredicted RBP10.86□□□□□ -0.67
RAPGEF6-208ENST00000509018 SENP3-EIF4A1A0A087X0R7 540 aa10.83□□□□□ -0.68
RAPGEF6-208ENST00000509018 NEFLP07196 543 aa10.8□□□□□ -0.68
RAPGEF6-208ENST00000509018 A0A0G2JS52 829 aa10.8□□□□□ -0.68
RAPGEF6-208ENST00000509018 CHGAP10645 457 aaKnown RBP10.79□□□□□ -0.68
RAPGEF6-208ENST00000509018 ZBTB7CA1YPR0 619 aa10.79□□□□□ -0.68
RAPGEF6-208ENST00000509018 CENPBP07199 599 aaPredicted RBP10.76□□□□□ -0.69
RAPGEF6-208ENST00000509018 SCAF1Q9H7N4 1312 aaKnown RBP10.76□□□□□ -0.69
RAPGEF6-208ENST00000509018 CLSPNQ9HAW4 1339 aa10.67□□□□□ -0.7
RAPGEF6-208ENST00000509018 SALL2Q9Y467 1007 aaPredicted RBP10.66□□□□□ -0.7
RAPGEF6-208ENST00000509018 HRCP23327 699 aa10.62□□□□□ -0.71
RAPGEF6-208ENST00000509018 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.62□□□□□ -0.711e-6■■□□□ 13.7
RAPGEF6-208ENST00000509018 DAXXQ9UER7 740 aaPredicted RBP10.59□□□□□ -0.71
RAPGEF6-208ENST00000509018 CHIC2Q9UKJ5 165 aa10.59□□□□□ -0.71
RAPGEF6-208ENST00000509018 TRIM26Q12899 539 aaPredicted RBP10.58□□□□□ -0.72
RAPGEF6-208ENST00000509018 STAG3Q9UJ98 1225 aa10.56□□□□□ -0.72
RAPGEF6-208ENST00000509018 HIRIP3Q9BW71 556 aaPredicted RBP10.55□□□□□ -0.72
RAPGEF6-208ENST00000509018 KCNH8Q96L42 1107 aa10.51□□□□□ -0.73
RAPGEF6-208ENST00000509018 ZEB1P37275 1124 aaPredicted RBP10.5□□□□□ -0.73
RAPGEF6-208ENST00000509018 C14orf37Q86TY3 774 aa10.5□□□□□ -0.73
RAPGEF6-208ENST00000509018 ESF1Q9H501 851 aaKnown RBP10.49□□□□□ -0.73
RAPGEF6-208ENST00000509018 NPM2Q86SE8 214 aaKnown RBP10.48□□□□□ -0.73
RAPGEF6-208ENST00000509018 KDM2AQ9Y2K7 1162 aa10.46□□□□□ -0.73
RAPGEF6-208ENST00000509018 CANXP27824 592 aaKnown RBP10.46□□□□□ -0.73
RAPGEF6-208ENST00000509018 ZNF316A6NFI3 1004 aaPredicted RBP10.43□□□□□ -0.74
RAPGEF6-208ENST00000509018 TRHP20396 242 aaPredicted RBP10.43□□□□□ -0.74
RAPGEF6-208ENST00000509018 TAOK2Q9UL54 1235 aa10.43□□□□□ -0.74
RAPGEF6-208ENST00000509018 ARXQ96QS3 562 aa10.41□□□□□ -0.74
RAPGEF6-208ENST00000509018 TULP1O00294 542 aaPredicted RBP10.4□□□□□ -0.74
RAPGEF6-208ENST00000509018 MLECQ14165 292 aa10.39□□□□□ -0.75
RAPGEF6-208ENST00000509018 TPRNQ4KMQ1 711 aa10.39□□□□□ -0.75
RAPGEF6-208ENST00000509018 IRX6P78412 446 aaPredicted RBP10.39□□□□□ -0.75
RAPGEF6-208ENST00000509018 ARID4BQ4LE39 1312 aaPredicted RBP10.39□□□□□ -0.75
RAPGEF6-208ENST00000509018 AMER1Q5JTC6 1135 aaPredicted RBP10.38□□□□□ -0.75
RAPGEF6-208ENST00000509018 DIEXFQ68CQ4 756 aaKnown RBP10.38□□□□□ -0.75
RAPGEF6-208ENST00000509018 LMOD2Q6P5Q4 547 aa10.35□□□□□ -0.75
RAPGEF6-208ENST00000509018 NPM1P06748 294 aaKnown RBP eCLIP10.34□□□□□ -0.75
RAPGEF6-208ENST00000509018 FAM9BQ8IZU0 186 aa10.34□□□□□ -0.75
RAPGEF6-208ENST00000509018 SOX12O15370 315 aa10.32□□□□□ -0.76
RAPGEF6-208ENST00000509018 ZBTB47Q9UFB7 747 aaPredicted RBP10.31□□□□□ -0.76
RAPGEF6-208ENST00000509018 RGL3Q3MIN7 710 aa10.29□□□□□ -0.76
RAPGEF6-208ENST00000509018 HAP1P54257 671 aaPredicted RBP10.28□□□□□ -0.76
RAPGEF6-208ENST00000509018 GTF3C3Q9Y5Q9 886 aa10.27□□□□□ -0.76
RAPGEF6-208ENST00000509018 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.27□□□□□ -0.76
RAPGEF6-208ENST00000509018 RRP7BPQ9NSQ0 103 aa10.27□□□□□ -0.77
RAPGEF6-208ENST00000509018 ANP32CO43423 234 aa10.26□□□□□ -0.77
RAPGEF6-208ENST00000509018 PPM1GO15355 546 aaPredicted RBP10.25□□□□□ -0.77
RAPGEF6-208ENST00000509018 DDX10Q13206 875 aaKnown RBP10.24□□□□□ -0.77
RAPGEF6-208ENST00000509018 TNNT2P45379 298 aaPredicted RBP10.23□□□□□ -0.77
RAPGEF6-208ENST00000509018 CHMP7Q8WUX9 453 aaPredicted RBP10.23□□□□□ -0.77
RAPGEF6-208ENST00000509018 PPP1R15AO75807 674 aaPredicted RBP10.21□□□□□ -0.77
RAPGEF6-208ENST00000509018 SAFB2Q14151 953 aaKnown RBP eCLIP10.21□□□□□ -0.77
RAPGEF6-208ENST00000509018 NEFMP07197 916 aa10.19□□□□□ -0.78
RAPGEF6-208ENST00000509018 NUTM2DQ5VT03 806 aaPredicted RBP10.19□□□□□ -0.78
RAPGEF6-208ENST00000509018 TMC1Q8TDI8 760 aa10.19□□□□□ -0.78
RAPGEF6-208ENST00000509018 CSRNP3Q8WYN3 585 aa10.18□□□□□ -0.78
RAPGEF6-208ENST00000509018 NEUROD2Q15784 382 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms