Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
PRIM2P49643 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PRIM2P49643 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
PRIM2P49643 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
PRIM2P49643 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
PRIM2P49643 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PRIM2P49643 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PRIM2P49643 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PRIM2P49643 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.92■■□□□ 1.42
PRIM2P49643 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PRIM2P49643 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
PRIM2P49643 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.91■■□□□ 1.42
PRIM2P49643 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PRIM2P49643 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
PRIM2P49643 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
PRIM2P49643 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
PRIM2P49643 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
PRIM2P49643 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PRIM2P49643 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PRIM2P49643 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PRIM2P49643 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PRIM2P49643 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
PRIM2P49643 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PRIM2P49643 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
PRIM2P49643 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.9■■□□□ 1.42
PRIM2P49643 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PRIM2P49643 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
PRIM2P49643 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
PRIM2P49643 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PRIM2P49643 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
PRIM2P49643 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
PRIM2P49643 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.89■■□□□ 1.41
PRIM2P49643 LINC00273-201ENST00000539813 1452 ntBASIC23.88■■□□□ 1.41
PRIM2P49643 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PRIM2P49643 LINC01003-201ENST00000564834 1764 ntBASIC23.88■■□□□ 1.41
PRIM2P49643 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
PRIM2P49643 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
PRIM2P49643 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PRIM2P49643 BOD1-206ENST00000480951 814 ntTSL 2 BASIC23.87■■□□□ 1.41
PRIM2P49643 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC23.87■■□□□ 1.41
PRIM2P49643 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PRIM2P49643 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PRIM2P49643 AC135983.2-203ENST00000454486 1613 ntBASIC23.87■■□□□ 1.41
PRIM2P49643 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PRIM2P49643 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
PRIM2P49643 RPS2P35-201ENST00000443417 897 ntBASIC23.86■■□□□ 1.41
PRIM2P49643 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.86■■□□□ 1.41
PRIM2P49643 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.86■■□□□ 1.41
PRIM2P49643 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.86■■□□□ 1.41
PRIM2P49643 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
PRIM2P49643 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PRIM2P49643 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PRIM2P49643 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PRIM2P49643 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.85■■□□□ 1.41
PRIM2P49643 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.84■■□□□ 1.41
PRIM2P49643 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PRIM2P49643 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PRIM2P49643 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.84■■□□□ 1.41
PRIM2P49643 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC23.84■■□□□ 1.41
PRIM2P49643 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
PRIM2P49643 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.84■■□□□ 1.41
PRIM2P49643 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PRIM2P49643 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PRIM2P49643 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.83■■□□□ 1.41
PRIM2P49643 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PRIM2P49643 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
PRIM2P49643 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
PRIM2P49643 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.82■■□□□ 1.4
PRIM2P49643 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PRIM2P49643 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.81■■□□□ 1.4
PRIM2P49643 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PRIM2P49643 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PRIM2P49643 WHAMMP2-203ENST00000563942 1603 ntBASIC23.81■■□□□ 1.4
PRIM2P49643 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.8■■□□□ 1.4
PRIM2P49643 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.8■■□□□ 1.4
PRIM2P49643 AP002414.2-202ENST00000590929 1450 ntBASIC23.8■■□□□ 1.4
PRIM2P49643 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PRIM2P49643 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PRIM2P49643 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
PRIM2P49643 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PRIM2P49643 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
PRIM2P49643 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PRIM2P49643 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PRIM2P49643 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.78■■□□□ 1.4
PRIM2P49643 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PRIM2P49643 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PRIM2P49643 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PRIM2P49643 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC23.78■■□□□ 1.4
PRIM2P49643 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.78■■□□□ 1.4
PRIM2P49643 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.78■■□□□ 1.4
PRIM2P49643 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.78■■□□□ 1.4
PRIM2P49643 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
PRIM2P49643 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PRIM2P49643 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PRIM2P49643 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC23.77■■□□□ 1.4
PRIM2P49643 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
PRIM2P49643 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PRIM2P49643 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PRIM2P49643 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PRIM2P49643 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms