Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
CTR9Q6PD62 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CTR9Q6PD62 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC30.68■■■□□ 2.5
CTR9Q6PD62 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
CTR9Q6PD62 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CTR9Q6PD62 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
CTR9Q6PD62 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CTR9Q6PD62 HES6-205ENST00000409356 528 ntTSL 2 BASIC30.66■■■□□ 2.5
CTR9Q6PD62 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC30.65■■■□□ 2.5
CTR9Q6PD62 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC30.64■■■□□ 2.5
CTR9Q6PD62 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC30.64■■■□□ 2.5
CTR9Q6PD62 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC30.63■■■□□ 2.49
CTR9Q6PD62 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC30.62■■■□□ 2.49
CTR9Q6PD62 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC30.6■■■□□ 2.49
CTR9Q6PD62 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC30.6■■■□□ 2.49
CTR9Q6PD62 MIR4449-201ENST00000578365 66 ntBASIC30.6■■■□□ 2.49
CTR9Q6PD62 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC30.59■■■□□ 2.49
CTR9Q6PD62 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CTR9Q6PD62 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC30.59■■■□□ 2.49
CTR9Q6PD62 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CTR9Q6PD62 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC30.59■■■□□ 2.49
CTR9Q6PD62 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
CTR9Q6PD62 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC30.58■■■□□ 2.49
CTR9Q6PD62 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC30.58■■■□□ 2.49
CTR9Q6PD62 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC30.57■■■□□ 2.48
CTR9Q6PD62 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC30.57■■■□□ 2.48
CTR9Q6PD62 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
CTR9Q6PD62 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
CTR9Q6PD62 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
CTR9Q6PD62 METRNL-202ENST00000570778 967 ntTSL 5 BASIC30.56■■■□□ 2.48
CTR9Q6PD62 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
CTR9Q6PD62 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC30.56■■■□□ 2.48
CTR9Q6PD62 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CTR9Q6PD62 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CTR9Q6PD62 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CTR9Q6PD62 CHST11-202ENST00000546689 756 ntTSL 2 BASIC30.55■■■□□ 2.48
CTR9Q6PD62 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CTR9Q6PD62 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CTR9Q6PD62 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
CTR9Q6PD62 AP004833.2-201ENST00000532228 1454 ntBASIC30.53■■■□□ 2.48
CTR9Q6PD62 AL139393.2-201ENST00000608721 2025 ntBASIC30.53■■■□□ 2.48
CTR9Q6PD62 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC30.53■■■□□ 2.48
CTR9Q6PD62 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
CTR9Q6PD62 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
CTR9Q6PD62 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
CTR9Q6PD62 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CTR9Q6PD62 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CTR9Q6PD62 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CTR9Q6PD62 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC30.51■■■□□ 2.47
CTR9Q6PD62 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC30.51■■■□□ 2.47
CTR9Q6PD62 MEST-211ENST00000437945 1455 ntTSL 5 BASIC30.5■■■□□ 2.47
CTR9Q6PD62 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC30.5■■■□□ 2.47
CTR9Q6PD62 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CTR9Q6PD62 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC30.49■■■□□ 2.47
CTR9Q6PD62 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CTR9Q6PD62 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
CTR9Q6PD62 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
CTR9Q6PD62 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC30.48■■■□□ 2.47
CTR9Q6PD62 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC30.48■■■□□ 2.47
CTR9Q6PD62 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC30.47■■■□□ 2.47
CTR9Q6PD62 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
CTR9Q6PD62 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CTR9Q6PD62 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CTR9Q6PD62 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC30.46■■■□□ 2.47
CTR9Q6PD62 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC30.45■■■□□ 2.47
CTR9Q6PD62 AC110285.7-201ENST00000624417 1536 ntBASIC30.45■■■□□ 2.47
CTR9Q6PD62 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC30.45■■■□□ 2.46
CTR9Q6PD62 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC30.44■■■□□ 2.46
CTR9Q6PD62 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC30.44■■■□□ 2.46
CTR9Q6PD62 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
CTR9Q6PD62 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC30.43■■■□□ 2.46
CTR9Q6PD62 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC30.42■■■□□ 2.46
CTR9Q6PD62 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC30.42■■■□□ 2.46
CTR9Q6PD62 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
CTR9Q6PD62 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC30.42■■■□□ 2.46
CTR9Q6PD62 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC30.42■■■□□ 2.46
CTR9Q6PD62 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC30.41■■■□□ 2.46
CTR9Q6PD62 AC100797.4-201ENST00000631653 1827 ntBASIC30.41■■■□□ 2.46
CTR9Q6PD62 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
CTR9Q6PD62 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
CTR9Q6PD62 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
CTR9Q6PD62 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC30.39■■■□□ 2.46
CTR9Q6PD62 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
CTR9Q6PD62 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CTR9Q6PD62 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
CTR9Q6PD62 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
CTR9Q6PD62 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC30.37■■■□□ 2.45
CTR9Q6PD62 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC30.37■■■□□ 2.45
CTR9Q6PD62 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC30.37■■■□□ 2.45
CTR9Q6PD62 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
CTR9Q6PD62 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC30.37■■■□□ 2.45
CTR9Q6PD62 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC30.37■■■□□ 2.45
CTR9Q6PD62 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC30.37■■■□□ 2.45
CTR9Q6PD62 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CTR9Q6PD62 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC30.36■■■□□ 2.45
CTR9Q6PD62 PEX7-203ENST00000541292 945 ntTSL 5 BASIC30.36■■■□□ 2.45
CTR9Q6PD62 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
CTR9Q6PD62 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC30.36■■■□□ 2.45
CTR9Q6PD62 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC30.35■■■□□ 2.45
CTR9Q6PD62 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC30.35■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms