RNA–Protein interactions for RNA: ENST00000219255.3

PARD6A-201, Transcript of par-6 family cell polarity regulator alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PARD6A, Length 1,248 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARD6A-201ENST00000219255 NISCHQ9Y2I1 1504 aa62.88■■■■■ 7.66
PARD6A-201ENST00000219255 CCDC180Q9P1Z9 1646 aa56.28■■■■■ 6.6
PARD6A-201ENST00000219255 ABCC9O60706 1549 aa55.84■■■■■ 6.53
PARD6A-201ENST00000219255 RB1CC1Q8TDY2 1594 aa53.4■■■■■ 6.14
PARD6A-201ENST00000219255 NACADO15069 1562 aa53.13■■■■■ 6.1
PARD6A-201ENST00000219255 DCAF8L2P0C7V8 631 aa53.03■■■■■ 6.08
PARD6A-201ENST00000219255 MYO15BQ96JP2 1530 aa52.52■■■■■ 6
PARD6A-201ENST00000219255 ZCCHC6Q5VYS8 1495 aaKnown RBP52.18■■■■■ 5.94
PARD6A-201ENST00000219255 UNC13AQ9UPW8 1703 aa52.07■■■■■ 5.93
PARD6A-201ENST00000219255 PABPN1Q86U42 306 aaKnown RBP eCLIP52.06■■■■■ 5.92
PARD6A-201ENST00000219255 DCAF1Q9Y4B6 1507 aa51.99■■■■■ 5.91
PARD6A-201ENST00000219255 DNAJC5BQ9UF47 199 aa51.9■■■■■ 5.9
PARD6A-201ENST00000219255 BICRAQ9NZM4 1560 aa51.69■■■■■ 5.86
PARD6A-201ENST00000219255 SCRIBQ14160 1630 aa51.27■■■■■ 5.8
PARD6A-201ENST00000219255 SHROOM4Q9ULL8 1493 aa51.19■■■■■ 5.79
PARD6A-201ENST00000219255 CC2D2AQ9P2K1 1620 aa50.47■■■■■ 5.67
PARD6A-201ENST00000219255 EIF4G1Q04637 1599 aaKnown RBP50.47■■■■■ 5.67
PARD6A-201ENST00000219255 CECR2Q9BXF3 1484 aa50.29■■■■■ 5.64
PARD6A-201ENST00000219255 NCAPD3P42695 1498 aa49.01■■■■■ 5.44
PARD6A-201ENST00000219255 SMARCA4P51532 1647 aa48.96■■■■■ 5.43
PARD6A-201ENST00000219255 ATAD2BQ9ULI0 1458 aa48.9■■■■■ 5.42
PARD6A-201ENST00000219255 SMARCA2P51531 1590 aa48.86■■■■■ 5.41
PARD6A-201ENST00000219255 BAZ1AQ9NRL2 1556 aaPredicted RBP48.84■■■■■ 5.41
PARD6A-201ENST00000219255 HMGXB3Q12766 1538 aa48.69■■■■■ 5.39
PARD6A-201ENST00000219255 BAZ1BQ9UIG0 1483 aaKnown RBP48.51■■■■■ 5.36
PARD6A-201ENST00000219255 PEG3Q9GZU2 1588 aa48.47■■■■■ 5.35
PARD6A-201ENST00000219255 MROH2BQ7Z745 1585 aa48.41■■■■■ 5.34
PARD6A-201ENST00000219255 ERCC6Q03468 1493 aa48.29■■■■■ 5.32
PARD6A-201ENST00000219255 NESP48681 1621 aa48.03■■■■■ 5.28
PARD6A-201ENST00000219255 CUX2O14529 1486 aa48.02■■■■■ 5.28
PARD6A-201ENST00000219255 LAMC3Q9Y6N6 1575 aa47.88■■■■■ 5.25
PARD6A-201ENST00000219255 WIZO95785 1651 aa47.87■■■■■ 5.25
PARD6A-201ENST00000219255 PDS5BQ9NTI5 1447 aa47.64■■■■■ 5.22
PARD6A-201ENST00000219255 RSF1Q96T23 1441 aaPredicted RBP47.58■■■■■ 5.21
PARD6A-201ENST00000219255 CADPSQ9ULU8 1353 aa47.57■■■■■ 5.21
PARD6A-201ENST00000219255 DNAJC5Q9H3Z4 198 aa47.48■■■■■ 5.19
PARD6A-201ENST00000219255 THOC2Q8NI27 1593 aaKnown RBP47.48■■■■■ 5.19
PARD6A-201ENST00000219255 KIF21AQ7Z4S6 1674 aa47.46■■■■■ 5.19
PARD6A-201ENST00000219255 TOP2AP11388 1531 aaKnown RBP47.34■■■■■ 5.17
PARD6A-201ENST00000219255 MRC2Q9UBG0 1479 aa47.14■■■■■ 5.14
PARD6A-201ENST00000219255 CFTRP13569 1480 aa47.08■■■■■ 5.13
PARD6A-201ENST00000219255 CEP164Q9UPV0 1460 aa47.06■■■■■ 5.12
PARD6A-201ENST00000219255 FANCD2Q9BXW9 1451 aa47.02■■■■■ 5.12
PARD6A-201ENST00000219255 WDR62O43379 1518 aa46.97■■■■■ 5.11
PARD6A-201ENST00000219255 CCDC88BA6NC98 1476 aa46.78■■■■■ 5.08
PARD6A-201ENST00000219255 PRDM2Q13029 1718 aa46.67■■■■■ 5.06
PARD6A-201ENST00000219255 URB2Q14146 1524 aaKnown RBP46.54■■■■■ 5.04
PARD6A-201ENST00000219255 ABCC8Q09428 1581 aa46.19■■■■■ 4.99
PARD6A-201ENST00000219255 TOPBP1Q92547 1522 aa46.15■■■■■ 4.98
PARD6A-201ENST00000219255 IFT140Q96RY7 1462 aa46.1■■■■■ 4.97
PARD6A-201ENST00000219255 DNMBPQ6XZF7 1577 aa46.05■■■■■ 4.96
PARD6A-201ENST00000219255 OSCARQ8IYS5 282 aa45.95■■■■■ 4.95
PARD6A-201ENST00000219255 SUPT5HO00267 1087 aaKnown RBP45.9■■■■■ 4.94
PARD6A-201ENST00000219255 ZNF608Q9ULD9 1512 aaPredicted RBP45.89■■■■■ 4.94
PARD6A-201ENST00000219255 POLA1P09884 1462 aaPredicted RBP45.7■■■■■ 4.91
PARD6A-201ENST00000219255 EIF4G3O43432 1585 aaKnown RBP45.7■■■■■ 4.91
PARD6A-201ENST00000219255 TARBP1Q13395 1621 aaKnown RBP45.67■■■■■ 4.9
PARD6A-201ENST00000219255 TRIM41Q8WV44 630 aa45.63■■■■■ 4.9
PARD6A-201ENST00000219255 AQRO60306 1485 aaKnown RBP eCLIP45.57■■■■■ 4.89
PARD6A-201ENST00000219255 SOGA1O94964 1423 aa45.56■■■■■ 4.88
PARD6A-201ENST00000219255 RAD54L2Q9Y4B4 1467 aa45.5■■■■■ 4.87
PARD6A-201ENST00000219255 FGD5Q6ZNL6 1462 aa45.49■■■■■ 4.87
PARD6A-201ENST00000219255 CUX1P39880 1505 aa45.47■■■■■ 4.87
PARD6A-201ENST00000219255 TDRD9Q8NDG6 1382 aaKnown RBP45.37■■■■■ 4.85
PARD6A-201ENST00000219255 WDR97A6NE52 1622 aa45.35■■■■■ 4.85
PARD6A-201ENST00000219255 FBLN2P98095 1184 aa45.31■■■■■ 4.84
PARD6A-201ENST00000219255 CHD1O14646 1710 aa45.28■■■■■ 4.84
PARD6A-201ENST00000219255 RIMBP3CA6NJZ7 1639 aa45.19■■■■■ 4.83
PARD6A-201ENST00000219255 RIMBP3BA6NNM3 1639 aa45.19■■■■■ 4.83
PARD6A-201ENST00000219255 RIMBP3Q9UFD9 1639 aa45.19■■■■■ 4.83
PARD6A-201ENST00000219255 SNAPC4Q5SXM2 1469 aa45.14■■■■■ 4.82
PARD6A-201ENST00000219255 GRIN2BQ13224 1484 aa45.12■■■■■ 4.81
PARD6A-201ENST00000219255 ARHGEF11O15085 1522 aa45.11■■■■■ 4.81
PARD6A-201ENST00000219255 MAGI1Q96QZ7 1491 aaPredicted RBP45.08■■■■■ 4.81
PARD6A-201ENST00000219255 CHMP7Q8WUX9 453 aaPredicted RBP45.05■■■■■ 4.8
PARD6A-201ENST00000219255 GAPVD1Q14C86 1478 aa45.01■■■■■ 4.8
PARD6A-201ENST00000219255 ABCA10Q8WWZ4 1543 aa45.01■■■■■ 4.8
PARD6A-201ENST00000219255 WRNQ14191 1432 aaPredicted RBP eCLIP44.97■■■■■ 4.79
PARD6A-201ENST00000219255 PBRM1Q86U86 1689 aa44.93■■■■■ 4.78
PARD6A-201ENST00000219255 SYNJ2O15056 1496 aa44.91■■■■■ 4.78
PARD6A-201ENST00000219255 TOP2BQ02880 1626 aa44.9■■■■■ 4.78
PARD6A-201ENST00000219255 BIVM-ERCC5R4GMW8 1640 aa44.89■■■■■ 4.78
PARD6A-201ENST00000219255 SYNJ1O43426 1573 aa44.87■■■■■ 4.77
PARD6A-201ENST00000219255 ABCA5Q8WWZ7 1642 aa44.86■■■■■ 4.77
PARD6A-201ENST00000219255 CYB5RLQ6IPT4 315 aa44.82■■■■■ 4.77
PARD6A-201ENST00000219255 CLASP1Q7Z460 1538 aa44.75■■■■■ 4.75
PARD6A-201ENST00000219255 ARAP1Q96P48 1450 aa44.66■■■■■ 4.74
PARD6A-201ENST00000219255 ADAMTS12P58397 1594 aa44.51■■■■■ 4.72
PARD6A-201ENST00000219255 GRIN2AQ12879 1464 aa44.5■■■■■ 4.71
PARD6A-201ENST00000219255 ERICH3Q5RHP9 1530 aa44.48■■■■■ 4.71
PARD6A-201ENST00000219255 FHAD1B1AJZ9 1412 aa44.46■■■■■ 4.71
PARD6A-201ENST00000219255 NUP160Q12769 1436 aa44.32■■■■■ 4.68
PARD6A-201ENST00000219255 CEP170Q5SW79 1584 aa44.28■■■■■ 4.68
PARD6A-201ENST00000219255 TRHP20396 242 aaPredicted RBP44.25■■■■■ 4.67
PARD6A-201ENST00000219255 KIF27Q86VH2 1401 aa44.11■■■■■ 4.65
PARD6A-201ENST00000219255 SHROOM2Q13796 1616 aa44.06■■■■■ 4.64
PARD6A-201ENST00000219255 ERCC6L2Q5T890 1561 aa44.03■■■■■ 4.64
PARD6A-201ENST00000219255 IGF1RP08069 1367 aa43.97■■■■■ 4.63
PARD6A-201ENST00000219255 JPH4Q96JJ6 628 aa43.94■■■■■ 4.62
PARD6A-201ENST00000219255 CUL7Q14999 1698 aa43.94■■■■■ 4.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms