RNA–Protein interactions for RNA: ENST00000409870.1

C2orf88-204, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C2orf88, Length 1,441 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-204ENST00000409870 NISCHQ9Y2I1 1504 aa61.64■■■■■ 7.46
C2orf88-204ENST00000409870 CCDC180Q9P1Z9 1646 aa54.85■■■■■ 6.37
C2orf88-204ENST00000409870 ABCC9O60706 1549 aa54.3■■■■■ 6.28
C2orf88-204ENST00000409870 RB1CC1Q8TDY2 1594 aa51.95■■■■■ 5.91
C2orf88-204ENST00000409870 NACADO15069 1562 aa51.67■■■■■ 5.86
C2orf88-204ENST00000409870 ZCCHC6Q5VYS8 1495 aaKnown RBP51.49■■■■■ 5.83
C2orf88-204ENST00000409870 DCAF8L2P0C7V8 631 aa51.26■■■■■ 5.8
C2orf88-204ENST00000409870 MYO15BQ96JP2 1530 aa51.11■■■■■ 5.77
C2orf88-204ENST00000409870 DCAF1Q9Y4B6 1507 aa51.06■■■■■ 5.76
C2orf88-204ENST00000409870 UNC13AQ9UPW8 1703 aa50.84■■■■■ 5.73
C2orf88-204ENST00000409870 PABPN1Q86U42 306 aaKnown RBP eCLIP50.51■■■■■ 5.68
C2orf88-204ENST00000409870 DNAJC5BQ9UF47 199 aa50.44■■■■■ 5.66
C2orf88-204ENST00000409870 BICRAQ9NZM4 1560 aa50.4■■■■■ 5.66
C2orf88-204ENST00000409870 SCRIBQ14160 1630 aa49.94■■■■■ 5.59
C2orf88-204ENST00000409870 SHROOM4Q9ULL8 1493 aa49.83■■■■■ 5.57
C2orf88-204ENST00000409870 EIF4G1Q04637 1599 aaKnown RBP49.14■■■■■ 5.46
C2orf88-204ENST00000409870 CC2D2AQ9P2K1 1620 aa49.13■■■■■ 5.46
C2orf88-204ENST00000409870 CECR2Q9BXF3 1484 aa48.89■■■■■ 5.42
C2orf88-204ENST00000409870 BAZ1AQ9NRL2 1556 aaPredicted RBP47.76■■■■■ 5.24
C2orf88-204ENST00000409870 SMARCA4P51532 1647 aa47.76■■■■■ 5.24
C2orf88-204ENST00000409870 NCAPD3P42695 1498 aa47.63■■■■■ 5.22
C2orf88-204ENST00000409870 ATAD2BQ9ULI0 1458 aa47.57■■■■■ 5.2
C2orf88-204ENST00000409870 SMARCA2P51531 1590 aa47.51■■■■■ 5.2
C2orf88-204ENST00000409870 MROH2BQ7Z745 1585 aa47.51■■■■■ 5.2
C2orf88-204ENST00000409870 HMGXB3Q12766 1538 aa47.42■■■■■ 5.18
C2orf88-204ENST00000409870 PEG3Q9GZU2 1588 aa47.3■■■■■ 5.16
C2orf88-204ENST00000409870 BAZ1BQ9UIG0 1483 aaKnown RBP47.16■■■■■ 5.14
C2orf88-204ENST00000409870 RSF1Q96T23 1441 aaPredicted RBP47.12■■■■■ 5.13
C2orf88-204ENST00000409870 WIZO95785 1651 aa47.03■■■■■ 5.12
C2orf88-204ENST00000409870 ERCC6Q03468 1493 aa46.88■■■■■ 5.1
C2orf88-204ENST00000409870 NESP48681 1621 aa46.76■■■■■ 5.08
C2orf88-204ENST00000409870 CUX2O14529 1486 aa46.69■■■■■ 5.07
C2orf88-204ENST00000409870 TOP2AP11388 1531 aaKnown RBP46.58■■■■■ 5.05
C2orf88-204ENST00000409870 LAMC3Q9Y6N6 1575 aa46.58■■■■■ 5.05
C2orf88-204ENST00000409870 THOC2Q8NI27 1593 aaKnown RBP46.33■■■■■ 5.01
C2orf88-204ENST00000409870 KIF21AQ7Z4S6 1674 aa46.29■■■■■ 5
C2orf88-204ENST00000409870 PDS5BQ9NTI5 1447 aa46.22■■■■■ 4.99
C2orf88-204ENST00000409870 CADPSQ9ULU8 1353 aa46.18■■■■■ 4.98
C2orf88-204ENST00000409870 SUPT5HO00267 1087 aaKnown RBP46.18■■■■■ 4.98
C2orf88-204ENST00000409870 DNAJC5Q9H3Z4 198 aa46.05■■■■■ 4.96
C2orf88-204ENST00000409870 CCDC88BA6NC98 1476 aa45.98■■■■■ 4.95
C2orf88-204ENST00000409870 MRC2Q9UBG0 1479 aa45.85■■■■■ 4.93
C2orf88-204ENST00000409870 CFTRP13569 1480 aa45.79■■■■■ 4.92
C2orf88-204ENST00000409870 WDR62O43379 1518 aa45.76■■■■■ 4.92
C2orf88-204ENST00000409870 CEP164Q9UPV0 1460 aa45.76■■■■■ 4.92
C2orf88-204ENST00000409870 FANCD2Q9BXW9 1451 aa45.71■■■■■ 4.91
C2orf88-204ENST00000409870 PRDM2Q13029 1718 aa45.54■■■■■ 4.88
C2orf88-204ENST00000409870 URB2Q14146 1524 aaKnown RBP45.32■■■■■ 4.85
C2orf88-204ENST00000409870 TOPBP1Q92547 1522 aa44.91■■■■■ 4.78
C2orf88-204ENST00000409870 ABCC8Q09428 1581 aa44.83■■■■■ 4.77
C2orf88-204ENST00000409870 DNMBPQ6XZF7 1577 aa44.81■■■■■ 4.76
C2orf88-204ENST00000409870 IFT140Q96RY7 1462 aa44.8■■■■■ 4.76
C2orf88-204ENST00000409870 ZNF608Q9ULD9 1512 aaPredicted RBP44.67■■■■■ 4.74
C2orf88-204ENST00000409870 CUX1P39880 1505 aa44.55■■■■■ 4.72
C2orf88-204ENST00000409870 EIF4G3O43432 1585 aaKnown RBP44.55■■■■■ 4.72
C2orf88-204ENST00000409870 TARBP1Q13395 1621 aaKnown RBP44.5■■■■■ 4.71
C2orf88-204ENST00000409870 OSCARQ8IYS5 282 aa44.48■■■■■ 4.71
C2orf88-204ENST00000409870 POLA1P09884 1462 aaPredicted RBP44.47■■■■■ 4.71
C2orf88-204ENST00000409870 WRNQ14191 1432 aaPredicted RBP eCLIP44.41■■■■■ 4.7
C2orf88-204ENST00000409870 BIVM-ERCC5R4GMW8 1640 aa44.33■■■■■ 4.69
C2orf88-204ENST00000409870 SYNJ1O43426 1573 aa44.32■■■■■ 4.69
C2orf88-204ENST00000409870 FGD5Q6ZNL6 1462 aa44.32■■■■■ 4.68
C2orf88-204ENST00000409870 TOP2BQ02880 1626 aa44.31■■■■■ 4.68
C2orf88-204ENST00000409870 AQRO60306 1485 aaKnown RBP eCLIP44.26■■■■■ 4.68
C2orf88-204ENST00000409870 RAD54L2Q9Y4B4 1467 aa44.25■■■■■ 4.67
C2orf88-204ENST00000409870 TRIM41Q8WV44 630 aa44.21■■■■■ 4.67
C2orf88-204ENST00000409870 SOGA1O94964 1423 aa44.2■■■■■ 4.67
C2orf88-204ENST00000409870 WDR97A6NE52 1622 aa44.15■■■■■ 4.66
C2orf88-204ENST00000409870 CHD1O14646 1710 aa44.15■■■■■ 4.66
C2orf88-204ENST00000409870 TDRD9Q8NDG6 1382 aaKnown RBP44.04■■■■■ 4.64
C2orf88-204ENST00000409870 RIMBP3CA6NJZ7 1639 aa44.02■■■■■ 4.64
C2orf88-204ENST00000409870 RIMBP3BA6NNM3 1639 aa44.02■■■■■ 4.64
C2orf88-204ENST00000409870 RIMBP3Q9UFD9 1639 aa44.02■■■■■ 4.64
C2orf88-204ENST00000409870 ABCA10Q8WWZ4 1543 aa43.92■■■■■ 4.62
C2orf88-204ENST00000409870 SNAPC4Q5SXM2 1469 aa43.91■■■■■ 4.62
C2orf88-204ENST00000409870 ARHGEF11O15085 1522 aa43.9■■■■■ 4.62
C2orf88-204ENST00000409870 FBLN2P98095 1184 aa43.83■■■■■ 4.61
C2orf88-204ENST00000409870 GRIN2BQ13224 1484 aa43.83■■■■■ 4.61
C2orf88-204ENST00000409870 MAGI1Q96QZ7 1491 aaPredicted RBP43.83■■■■■ 4.61
C2orf88-204ENST00000409870 PBRM1Q86U86 1689 aa43.81■■■■■ 4.6
C2orf88-204ENST00000409870 ABCA5Q8WWZ7 1642 aa43.74■■■■■ 4.59
C2orf88-204ENST00000409870 GAPVD1Q14C86 1478 aa43.72■■■■■ 4.59
C2orf88-204ENST00000409870 SYNJ2O15056 1496 aa43.66■■■■■ 4.58
C2orf88-204ENST00000409870 CLASP1Q7Z460 1538 aa43.62■■■■■ 4.57
C2orf88-204ENST00000409870 CHMP7Q8WUX9 453 aaPredicted RBP43.6■■■■■ 4.57
C2orf88-204ENST00000409870 ARAP1Q96P48 1450 aa43.5■■■■■ 4.55
C2orf88-204ENST00000409870 KIF27Q86VH2 1401 aa43.45■■■■■ 4.55
C2orf88-204ENST00000409870 CHIC1Q5VXU3 224 aa43.41■■■■■ 4.54
C2orf88-204ENST00000409870 ERICH3Q5RHP9 1530 aa43.41■■■■■ 4.54
C2orf88-204ENST00000409870 CYB5RLQ6IPT4 315 aa43.39■■■■■ 4.54
C2orf88-204ENST00000409870 ADAMTS12P58397 1594 aa43.39■■■■■ 4.54
C2orf88-204ENST00000409870 GRIN2AQ12879 1464 aa43.29■■■■■ 4.52
C2orf88-204ENST00000409870 RUSC2Q8N2Y8 1516 aa43.19■■■■■ 4.51
C2orf88-204ENST00000409870 IGF1RP08069 1367 aa43.18■■■■■ 4.5
C2orf88-204ENST00000409870 FHAD1B1AJZ9 1412 aa43.18■■■■■ 4.5
C2orf88-204ENST00000409870 CEP170Q5SW79 1584 aa43.14■■■■■ 4.5
C2orf88-204ENST00000409870 CUL7Q14999 1698 aa43.14■■■■■ 4.5
C2orf88-204ENST00000409870 NUP160Q12769 1436 aa43.12■■■■■ 4.49
C2orf88-204ENST00000409870 SHROOM2Q13796 1616 aa42.95■■■■■ 4.47
C2orf88-204ENST00000409870 EEA1Q15075 1411 aa42.95■■■■■ 4.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms