Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 AC116562.4-201ENST00000641316 2276 ntBASIC19.61■□□□□ 0.73
CCDC189A1A4V9 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC189A1A4V9 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CCDC189A1A4V9 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC189A1A4V9 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC189A1A4V9 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC189A1A4V9 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC189A1A4V9 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CCDC189A1A4V9 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.6■□□□□ 0.73
CCDC189A1A4V9 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CCDC189A1A4V9 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CCDC189A1A4V9 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
CCDC189A1A4V9 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC189A1A4V9 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CCDC189A1A4V9 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC189A1A4V9 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC189A1A4V9 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC189A1A4V9 AC099398.1-201ENST00000567919 2776 ntBASIC19.6■□□□□ 0.73
CCDC189A1A4V9 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC189A1A4V9 HLA-G-202ENST00000376815 851 ntBASIC19.6■□□□□ 0.73
CCDC189A1A4V9 HLA-G-203ENST00000376818 1127 ntBASIC19.6■□□□□ 0.73
CCDC189A1A4V9 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC189A1A4V9 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC189A1A4V9 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC189A1A4V9 AC007322.1-201ENST00000426983 750 ntBASIC19.6■□□□□ 0.73
CCDC189A1A4V9 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC189A1A4V9 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC189A1A4V9 AC023632.3-201ENST00000521633 145 ntBASIC19.6■□□□□ 0.73
CCDC189A1A4V9 AL589743.5-201ENST00000616611 1050 ntBASIC19.6■□□□□ 0.73
CCDC189A1A4V9 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC189A1A4V9 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC189A1A4V9 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC189A1A4V9 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC189A1A4V9 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC189A1A4V9 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC189A1A4V9 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
CCDC189A1A4V9 TNRC18P3-201ENST00000441896 2691 ntBASIC19.59■□□□□ 0.73
CCDC189A1A4V9 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC189A1A4V9 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC189A1A4V9 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC189A1A4V9 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC189A1A4V9 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CCDC189A1A4V9 MIR5787-201ENST00000611784 55 ntBASIC19.59■□□□□ 0.73
CCDC189A1A4V9 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.59■□□□□ 0.73
CCDC189A1A4V9 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CCDC189A1A4V9 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC189A1A4V9 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC189A1A4V9 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC189A1A4V9 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC189A1A4V9 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC189A1A4V9 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC189A1A4V9 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC189A1A4V9 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC189A1A4V9 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC189A1A4V9 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
CCDC189A1A4V9 AP001271.2-201ENST00000624018 1556 ntBASIC19.58■□□□□ 0.73
CCDC189A1A4V9 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC189A1A4V9 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC189A1A4V9 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.58■□□□□ 0.73
CCDC189A1A4V9 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.58■□□□□ 0.73
CCDC189A1A4V9 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC189A1A4V9 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.58■□□□□ 0.72
CCDC189A1A4V9 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC189A1A4V9 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.58■□□□□ 0.72
CCDC189A1A4V9 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC189A1A4V9 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC189A1A4V9 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
CCDC189A1A4V9 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC189A1A4V9 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC189A1A4V9 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.58■□□□□ 0.72
CCDC189A1A4V9 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC189A1A4V9 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC189A1A4V9 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC189A1A4V9 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC189A1A4V9 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
CCDC189A1A4V9 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC189A1A4V9 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.58■□□□□ 0.72
CCDC189A1A4V9 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC189A1A4V9 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC189A1A4V9 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC189A1A4V9 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC189A1A4V9 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC189A1A4V9 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC189A1A4V9 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC189A1A4V9 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC189A1A4V9 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC189A1A4V9 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
CCDC189A1A4V9 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC189A1A4V9 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC189A1A4V9 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC189A1A4V9 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC189A1A4V9 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC189A1A4V9 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC189A1A4V9 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC189A1A4V9 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC189A1A4V9 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC189A1A4V9 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.57■□□□□ 0.72
CCDC189A1A4V9 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.57■□□□□ 0.72
CCDC189A1A4V9 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC189A1A4V9 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms