RNA–Protein interactions for RNA: ENST00000378585.6

GABRD-201, Transcript of gamma-aminobutyric acid type A receptor delta subunit, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GABRD, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRD-201ENST00000378585 NISCHQ9Y2I1 1504 aa43.48■■■■■ 4.55
GABRD-201ENST00000378585 CCDC180Q9P1Z9 1646 aa37.64■■■■□ 3.62
GABRD-201ENST00000378585 ZCCHC6Q5VYS8 1495 aaKnown RBP36.64■■■■□ 3.46
GABRD-201ENST00000378585 SHROOM4Q9ULL8 1493 aa35.95■■■■□ 3.35
GABRD-201ENST00000378585 DCAF1Q9Y4B6 1507 aa35.9■■■■□ 3.34
GABRD-201ENST00000378585 DCAF8L2P0C7V8 631 aa35.82■■■■□ 3.32
GABRD-201ENST00000378585 MYO15BQ96JP2 1530 aa35.26■■■■□ 3.24
GABRD-201ENST00000378585 ABCC9O60706 1549 aa35.18■■■■□ 3.22
GABRD-201ENST00000378585 NACADO15069 1562 aa34.93■■■■□ 3.18
GABRD-201ENST00000378585 SUPT5HO00267 1087 aaKnown RBP34.84■■■■□ 3.17
GABRD-201ENST00000378585 SCRIBQ14160 1630 aa34.77■■■■□ 3.16
GABRD-201ENST00000378585 RB1CC1Q8TDY2 1594 aa34.51■■■■□ 3.12
GABRD-201ENST00000378585 RSF1Q96T23 1441 aaPredicted RBP33.96■■■■□ 3.03
GABRD-201ENST00000378585 UNC13AQ9UPW8 1703 aa33.9■■■■□ 3.02
GABRD-201ENST00000378585 CECR2Q9BXF3 1484 aa33.78■■■■□ 3
GABRD-201ENST00000378585 MROH2BQ7Z745 1585 aa33.65■■■□□ 2.98
GABRD-201ENST00000378585 CHIC1Q5VXU3 224 aa33.6■■■□□ 2.97
GABRD-201ENST00000378585 BAZ1AQ9NRL2 1556 aaPredicted RBP33.53■■■□□ 2.96
GABRD-201ENST00000378585 BICRAQ9NZM4 1560 aa33.5■■■□□ 2.95
GABRD-201ENST00000378585 WIZO95785 1651 aa33.42■■■□□ 2.94
GABRD-201ENST00000378585 SMARCA4P51532 1647 aa33.33■■■□□ 2.93
GABRD-201ENST00000378585 PABPN1Q86U42 306 aaKnown RBP eCLIP33.3■■■□□ 2.92
GABRD-201ENST00000378585 TOP2AP11388 1531 aaKnown RBP33.04■■■□□ 2.88
GABRD-201ENST00000378585 PEG3Q9GZU2 1588 aa32.86■■■□□ 2.85
GABRD-201ENST00000378585 SMARCA2P51531 1590 aa32.77■■■□□ 2.84
GABRD-201ENST00000378585 CCDC88BA6NC98 1476 aa32.73■■■□□ 2.83
GABRD-201ENST00000378585 EIF4G1Q04637 1599 aaKnown RBP32.73■■■□□ 2.83
GABRD-201ENST00000378585 TRIM41Q8WV44 630 aa32.69■■■□□ 2.82
GABRD-201ENST00000378585 ATAD2BQ9ULI0 1458 aa32.63■■■□□ 2.81
GABRD-201ENST00000378585 BAZ1BQ9UIG0 1483 aaKnown RBP32.49■■■□□ 2.79
GABRD-201ENST00000378585 LOC105371045A0A1W2PR82 267 aa32.38■■■□□ 2.77
GABRD-201ENST00000378585 ABCC8Q09428 1581 aa32.26■■■□□ 2.75
GABRD-201ENST00000378585 HMGXB3Q12766 1538 aa32.24■■■□□ 2.75
GABRD-201ENST00000378585 NCAPD3P42695 1498 aa32.24■■■□□ 2.75
GABRD-201ENST00000378585 FAM9AQ8IZU1 332 aaPredicted RBP32.16■■■□□ 2.74
GABRD-201ENST00000378585 WRNQ14191 1432 aaPredicted RBP eCLIP31.95■■■□□ 2.7
GABRD-201ENST00000378585 CC2D2AQ9P2K1 1620 aa31.84■■■□□ 2.69
GABRD-201ENST00000378585 SYNJ1O43426 1573 aa31.82■■■□□ 2.68
GABRD-201ENST00000378585 SOGA1O94964 1423 aa31.75■■■□□ 2.67
GABRD-201ENST00000378585 EEA1Q15075 1411 aa31.73■■■□□ 2.67
GABRD-201ENST00000378585 EHMT2Q96KQ7 1210 aa31.72■■■□□ 2.67
GABRD-201ENST00000378585 CFTRP13569 1480 aa31.69■■■□□ 2.66
GABRD-201ENST00000378585 TOP2BQ02880 1626 aa31.62■■■□□ 2.65
GABRD-201ENST00000378585 RUSC2Q8N2Y8 1516 aa31.61■■■□□ 2.65
GABRD-201ENST00000378585 BIVM-ERCC5R4GMW8 1640 aa31.58■■■□□ 2.65
GABRD-201ENST00000378585 PRDM2Q13029 1718 aa31.58■■■□□ 2.65
GABRD-201ENST00000378585 CSRNP3Q8WYN3 585 aa31.54■■■□□ 2.64
GABRD-201ENST00000378585 PCGF6Q9BYE7 350 aa31.48■■■□□ 2.63
GABRD-201ENST00000378585 CADPSQ9ULU8 1353 aa31.46■■■□□ 2.63
GABRD-201ENST00000378585 CUX1P39880 1505 aa31.42■■■□□ 2.62
GABRD-201ENST00000378585 GOLGA3Q08378 1498 aa31.36■■■□□ 2.61
GABRD-201ENST00000378585 TNIKQ9UKE5 1360 aa31.36■■■□□ 2.61
GABRD-201ENST00000378585 KIF21BO75037 1637 aa31.33■■■□□ 2.61
GABRD-201ENST00000378585 CEP164Q9UPV0 1460 aa31.3■■■□□ 2.6
GABRD-201ENST00000378585 TRIM26Q12899 539 aaPredicted RBP31.3■■■□□ 2.6
GABRD-201ENST00000378585 CEP162Q5TB80 1403 aa31.26■■■□□ 2.59
GABRD-201ENST00000378585 UBTFP17480 764 aaKnown RBP31.22■■■□□ 2.59
GABRD-201ENST00000378585 FANCD2Q9BXW9 1451 aa31.14■■■□□ 2.58
GABRD-201ENST00000378585 KIF27Q86VH2 1401 aa31.08■■■□□ 2.57
GABRD-201ENST00000378585 RAPGEF2Q9Y4G8 1499 aa31.08■■■□□ 2.57
GABRD-201ENST00000378585 NESP48681 1621 aa31.07■■■□□ 2.56
GABRD-201ENST00000378585 LAMC3Q9Y6N6 1575 aa31.06■■■□□ 2.56
GABRD-201ENST00000378585 PRXQ9BXM0 1461 aa31.01■■■□□ 2.55
GABRD-201ENST00000378585 ERICH3Q5RHP9 1530 aa31.01■■■□□ 2.55
GABRD-201ENST00000378585 FGD5Q6ZNL6 1462 aa30.99■■■□□ 2.55
GABRD-201ENST00000378585 HRCP23327 699 aa30.99■■■□□ 2.55
GABRD-201ENST00000378585 DNMBPQ6XZF7 1577 aa30.95■■■□□ 2.55
GABRD-201ENST00000378585 DNAJC5BQ9UF47 199 aa30.9■■■□□ 2.54
GABRD-201ENST00000378585 CUX2O14529 1486 aa30.9■■■□□ 2.54
GABRD-201ENST00000378585 CLIP1P30622 1438 aa30.89■■■□□ 2.54
GABRD-201ENST00000378585 TOPBP1Q92547 1522 aa30.87■■■□□ 2.53
GABRD-201ENST00000378585 PPARGC1BQ86YN6 1023 aaKnown RBP30.85■■■□□ 2.53
GABRD-201ENST00000378585 PDS5BQ9NTI5 1447 aa30.8■■■□□ 2.52
GABRD-201ENST00000378585 POLA1P09884 1462 aaPredicted RBP30.76■■■□□ 2.52
GABRD-201ENST00000378585 IGF1RP08069 1367 aa30.75■■■□□ 2.51
GABRD-201ENST00000378585 URB2Q14146 1524 aaKnown RBP30.73■■■□□ 2.51
GABRD-201ENST00000378585 ABCA10Q8WWZ4 1543 aa30.71■■■□□ 2.51
GABRD-201ENST00000378585 KIF21AQ7Z4S6 1674 aa30.7■■■□□ 2.5
GABRD-201ENST00000378585 VPS8Q8N3P4 1428 aa30.69■■■□□ 2.5
GABRD-201ENST00000378585 RAD54L2Q9Y4B4 1467 aa30.69■■■□□ 2.5
GABRD-201ENST00000378585 CARMIL1Q5VZK9 1371 aa30.61■■■□□ 2.49
GABRD-201ENST00000378585 RANGAP1P46060 587 aaPredicted RBP30.61■■■□□ 2.49
GABRD-201ENST00000378585 WDR97A6NE52 1622 aa30.58■■■□□ 2.49
GABRD-201ENST00000378585 ARAP1Q96P48 1450 aa30.52■■■□□ 2.48
GABRD-201ENST00000378585 TTBK1Q5TCY1 1321 aaPredicted RBP30.51■■■□□ 2.47
GABRD-201ENST00000378585 CUL7Q14999 1698 aa30.47■■■□□ 2.47
GABRD-201ENST00000378585 ABCA5Q8WWZ7 1642 aa30.43■■■□□ 2.46
GABRD-201ENST00000378585 ARHGAP35Q9NRY4 1499 aa30.42■■■□□ 2.46
GABRD-201ENST00000378585 APLP2Q06481 763 aa30.41■■■□□ 2.46
GABRD-201ENST00000378585 MRC2Q9UBG0 1479 aa30.39■■■□□ 2.45
GABRD-201ENST00000378585 TARBP1Q13395 1621 aaKnown RBP30.36■■■□□ 2.45
GABRD-201ENST00000378585 TDRD9Q8NDG6 1382 aaKnown RBP30.34■■■□□ 2.45
GABRD-201ENST00000378585 GAPVD1Q14C86 1478 aa30.33■■■□□ 2.45
GABRD-201ENST00000378585 ZEB1P37275 1124 aaPredicted RBP30.3■■■□□ 2.44
GABRD-201ENST00000378585 CTTNBP2Q8WZ74 1663 aa30.24■■■□□ 2.43
GABRD-201ENST00000378585 WDR62O43379 1518 aa30.21■■■□□ 2.43
GABRD-201ENST00000378585 PBRM1Q86U86 1689 aa30.15■■■□□ 2.42
GABRD-201ENST00000378585 EFCAB5A4FU69 1503 aa30.12■■■□□ 2.41
GABRD-201ENST00000378585 ERCC6Q03468 1493 aa30.09■■■□□ 2.41
GABRD-201ENST00000378585 IFT140Q96RY7 1462 aa30.09■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 139.4 ms