RNA–Protein interactions for RNA: ENST00000397011.2

EIF3B-202, Transcript of eukaryotic translation initiation factor 3 subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3B, Length 2,966 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3B-202ENST00000397011 NISCHQ9Y2I1 1504 aa38.67■■■■□ 3.78
EIF3B-202ENST00000397011 SHROOM4Q9ULL8 1493 aa34.07■■■■□ 3.05
EIF3B-202ENST00000397011 SUPT5HO00267 1087 aaKnown RBP33.47■■■□□ 2.95
EIF3B-202ENST00000397011 DCAF8L2P0C7V8 631 aa33.21■■■□□ 2.91
EIF3B-202ENST00000397011 ZCCHC6Q5VYS8 1495 aaKnown RBP32.66■■■□□ 2.82
EIF3B-202ENST00000397011 CCDC180Q9P1Z9 1646 aa32.36■■■□□ 2.77
EIF3B-202ENST00000397011 CHIC1Q5VXU3 224 aa32.16■■■□□ 2.74
EIF3B-202ENST00000397011 MYO15BQ96JP2 1530 aa32.1■■■□□ 2.73
EIF3B-202ENST00000397011 PCGF6Q9BYE7 350 aa31.69■■■□□ 2.66
EIF3B-202ENST00000397011 LOC105371045A0A1W2PR82 267 aa31.62■■■□□ 2.65
EIF3B-202ENST00000397011 HRCP23327 699 aa31.37■■■□□ 2.61
EIF3B-202ENST00000397011 DCAF1Q9Y4B6 1507 aa31.26■■■□□ 2.59
EIF3B-202ENST00000397011 PPARGC1BQ86YN6 1023 aaKnown RBP31.25■■■□□ 2.59
EIF3B-202ENST00000397011 EHMT2Q96KQ7 1210 aa31.22■■■□□ 2.59
EIF3B-202ENST00000397011 SCRIBQ14160 1630 aa31.11■■■□□ 2.57
EIF3B-202ENST00000397011 FAM9AQ8IZU1 332 aaPredicted RBP31.09■■■□□ 2.57
EIF3B-202ENST00000397011 TRIM41Q8WV44 630 aa30.86■■■□□ 2.53
EIF3B-202ENST00000397011 RSF1Q96T23 1441 aaPredicted RBP30.85■■■□□ 2.53
EIF3B-202ENST00000397011 ABCC9O60706 1549 aa30.83■■■□□ 2.53
EIF3B-202ENST00000397011 RB1CC1Q8TDY2 1594 aa30.62■■■□□ 2.49
EIF3B-202ENST00000397011 TRIM26Q12899 539 aaPredicted RBP30.6■■■□□ 2.49
EIF3B-202ENST00000397011 CECR2Q9BXF3 1484 aa30.53■■■□□ 2.48
EIF3B-202ENST00000397011 MROH2BQ7Z745 1585 aa30.29■■■□□ 2.44
EIF3B-202ENST00000397011 TTBK1Q5TCY1 1321 aaPredicted RBP30.16■■■□□ 2.42
EIF3B-202ENST00000397011 WIZO95785 1651 aa30.13■■■□□ 2.41
EIF3B-202ENST00000397011 NACADO15069 1562 aa30.08■■■□□ 2.41
EIF3B-202ENST00000397011 PABPN1Q86U42 306 aaKnown RBP eCLIP29.82■■■□□ 2.365e-7■■■□□ 16.4
EIF3B-202ENST00000397011 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.81■■■□□ 2.36
EIF3B-202ENST00000397011 ZEB1P37275 1124 aaPredicted RBP29.75■■■□□ 2.35
EIF3B-202ENST00000397011 ABCC8Q09428 1581 aa29.72■■■□□ 2.35
EIF3B-202ENST00000397011 BAZ1AQ9NRL2 1556 aaPredicted RBP29.63■■■□□ 2.33
EIF3B-202ENST00000397011 CCER1Q8TC90 406 aaPredicted RBP29.61■■■□□ 2.33
EIF3B-202ENST00000397011 CCDC88BA6NC98 1476 aa29.6■■■□□ 2.33
EIF3B-202ENST00000397011 UBTFP17480 764 aaKnown RBP29.52■■■□□ 2.32
EIF3B-202ENST00000397011 SOGA1O94964 1423 aa29.5■■■□□ 2.31
EIF3B-202ENST00000397011 RANGAP1P46060 587 aaPredicted RBP29.42■■■□□ 2.3
EIF3B-202ENST00000397011 SMARCA4P51532 1647 aa29.4■■■□□ 2.3
EIF3B-202ENST00000397011 EIF4G1Q04637 1599 aaKnown RBP29.38■■■□□ 2.29
EIF3B-202ENST00000397011 RUSC2Q8N2Y8 1516 aa29.38■■■□□ 2.29
EIF3B-202ENST00000397011 TOP2AP11388 1531 aaKnown RBP29.38■■■□□ 2.29
EIF3B-202ENST00000397011 SMARCA2P51531 1590 aa29.32■■■□□ 2.28
EIF3B-202ENST00000397011 CEP162Q5TB80 1403 aa29.3■■■□□ 2.28
EIF3B-202ENST00000397011 CSRNP3Q8WYN3 585 aa29.28■■■□□ 2.28
EIF3B-202ENST00000397011 UNC13AQ9UPW8 1703 aa29.25■■■□□ 2.27
EIF3B-202ENST00000397011 SCAF1Q9H7N4 1312 aaKnown RBP29.19■■■□□ 2.26
EIF3B-202ENST00000397011 HNRNPUL2Q1KMD3 747 aaKnown RBP29.08■■■□□ 2.25
EIF3B-202ENST00000397011 TNIKQ9UKE5 1360 aa29.03■■■□□ 2.24
EIF3B-202ENST00000397011 WRNQ14191 1432 aaPredicted RBP eCLIP29.01■■■□□ 2.232e-7■□□□□ 9.5
EIF3B-202ENST00000397011 DIEXFQ68CQ4 756 aaKnown RBP28.98■■■□□ 2.23
EIF3B-202ENST00000397011 BICRAQ9NZM4 1560 aa28.96■■■□□ 2.23
EIF3B-202ENST00000397011 NEUROD1Q13562 356 aa28.87■■■□□ 2.21
EIF3B-202ENST00000397011 GOLGA3Q08378 1498 aa28.87■■■□□ 2.21
EIF3B-202ENST00000397011 SYNJ1O43426 1573 aa28.81■■■□□ 2.2
EIF3B-202ENST00000397011 EEA1Q15075 1411 aa28.79■■■□□ 2.2
EIF3B-202ENST00000397011 YTHDC1Q96MU7 727 aaKnown RBP28.77■■■□□ 2.2
EIF3B-202ENST00000397011 APLP2Q06481 763 aa28.76■■■□□ 2.19
EIF3B-202ENST00000397011 BAZ1BQ9UIG0 1483 aaKnown RBP28.74■■■□□ 2.19
EIF3B-202ENST00000397011 CLIP1P30622 1438 aa28.74■■■□□ 2.19
EIF3B-202ENST00000397011 ATAD2BQ9ULI0 1458 aa28.73■■■□□ 2.19
EIF3B-202ENST00000397011 ACIN1Q9UKV3 1341 aaKnown RBP28.71■■■□□ 2.19
EIF3B-202ENST00000397011 RAPGEF2Q9Y4G8 1499 aa28.68■■■□□ 2.18
EIF3B-202ENST00000397011 CEP164Q9UPV0 1460 aa28.65■■■□□ 2.18
EIF3B-202ENST00000397011 GTF3C3Q9Y5Q9 886 aa28.62■■■□□ 2.17
EIF3B-202ENST00000397011 ZNF316A6NFI3 1004 aaPredicted RBP28.59■■■□□ 2.17
EIF3B-202ENST00000397011 PEG3Q9GZU2 1588 aa28.5■■■□□ 2.15
EIF3B-202ENST00000397011 CENPBP07199 599 aaPredicted RBP28.49■■■□□ 2.15
EIF3B-202ENST00000397011 VPS8Q8N3P4 1428 aa28.47■■■□□ 2.15
EIF3B-202ENST00000397011 ITGAEP38570 1179 aa28.44■■■□□ 2.14
EIF3B-202ENST00000397011 MIER1Q8N108 512 aa28.42■■■□□ 2.14
EIF3B-202ENST00000397011 KANK4Q5T7N3 995 aaPredicted RBP28.39■■■□□ 2.14
EIF3B-202ENST00000397011 KIF21BO75037 1637 aa28.39■■■□□ 2.14
EIF3B-202ENST00000397011 TOP2BQ02880 1626 aa28.22■■■□□ 2.11
EIF3B-202ENST00000397011 PELP1Q8IZL8 1130 aaKnown RBP28.14■■■□□ 2.09
EIF3B-202ENST00000397011 ATP1B4Q9UN42 357 aaPredicted RBP28.14■■■□□ 2.09
EIF3B-202ENST00000397011 ARAP1Q96P48 1450 aa28.13■■■□□ 2.09
EIF3B-202ENST00000397011 CUX1P39880 1505 aa28.12■■■□□ 2.09
EIF3B-202ENST00000397011 P3H3Q8IVL6 736 aa28.11■■■□□ 2.09
EIF3B-202ENST00000397011 PRXQ9BXM0 1461 aa28.08■■■□□ 2.09
EIF3B-202ENST00000397011 KIF27Q86VH2 1401 aa28.05■■■□□ 2.08
EIF3B-202ENST00000397011 DHX57Q6P158 1386 aaKnown RBP28.01■■■□□ 2.07
EIF3B-202ENST00000397011 BIVM-ERCC5R4GMW8 1640 aa27.98■■■□□ 2.07
EIF3B-202ENST00000397011 NCAPD3P42695 1498 aa27.97■■■□□ 2.07
EIF3B-202ENST00000397011 CUX2O14529 1486 aa27.93■■■□□ 2.06
EIF3B-202ENST00000397011 ERICH3Q5RHP9 1530 aa27.89■■■□□ 2.06
EIF3B-202ENST00000397011 ARHGAP35Q9NRY4 1499 aa27.88■■■□□ 2.05
EIF3B-202ENST00000397011 FAM50AQ14320 339 aaKnown RBP27.87■■■□□ 2.05
EIF3B-202ENST00000397011 CFTRP13569 1480 aa27.87■■■□□ 2.05
EIF3B-202ENST00000397011 CCNB3Q8WWL7 1395 aa27.84■■■□□ 2.05
EIF3B-202ENST00000397011 HMGXB3Q12766 1538 aa27.83■■■□□ 2.05
EIF3B-202ENST00000397011 IGF1RP08069 1367 aa27.81■■■□□ 2.04
EIF3B-202ENST00000397011 CARMIL1Q5VZK9 1371 aa27.74■■■□□ 2.03
EIF3B-202ENST00000397011 HIRIP3Q9BW71 556 aaPredicted RBP27.72■■■□□ 2.03
EIF3B-202ENST00000397011 SIN3AQ96ST3 1273 aa27.72■■■□□ 2.03
EIF3B-202ENST00000397011 RRBP1Q9P2E9 1410 aaKnown RBP27.71■■■□□ 2.03
EIF3B-202ENST00000397011 KCNH8Q96L42 1107 aa27.71■■■□□ 2.03
EIF3B-202ENST00000397011 RAB3GAP2Q9H2M9 1393 aa27.7■■■□□ 2.02
EIF3B-202ENST00000397011 FGD5Q6ZNL6 1462 aa27.68■■■□□ 2.02
EIF3B-202ENST00000397011 CADPSQ9ULU8 1353 aa27.68■■■□□ 2.02
EIF3B-202ENST00000397011 CLSPNQ9HAW4 1339 aa27.63■■■□□ 2.01
EIF3B-202ENST00000397011 PHLDB1Q86UU1 1377 aa27.62■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms