RNA–Protein interactions for RNA: ENST00000263733.4

FAM20B-201, Transcript of FAM20B, glycosaminoglycan xylosylkinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM20B, Length 5,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM20B-201ENST00000263733 DCAF8L2P0C7V8 631 aa33.15■■■□□ 2.9
FAM20B-201ENST00000263733 SUPT5HO00267 1087 aaKnown RBP32.32■■■□□ 2.76
FAM20B-201ENST00000263733 NISCHQ9Y2I1 1504 aa31.73■■■□□ 2.67
FAM20B-201ENST00000263733 SHROOM4Q9ULL8 1493 aa31.66■■■□□ 2.66
FAM20B-201ENST00000263733 EHMT2Q96KQ7 1210 aa31.39■■■□□ 2.62
FAM20B-201ENST00000263733 PCGF6Q9BYE7 350 aa30.91■■■□□ 2.54
FAM20B-201ENST00000263733 PELP1Q8IZL8 1130 aaKnown RBP30.67■■■□□ 2.5
FAM20B-201ENST00000263733 FAM9AQ8IZU1 332 aaPredicted RBP30.51■■■□□ 2.47
FAM20B-201ENST00000263733 TTBK1Q5TCY1 1321 aaPredicted RBP30.41■■■□□ 2.46
FAM20B-201ENST00000263733 APLP2Q06481 763 aa30.16■■■□□ 2.42
FAM20B-201ENST00000263733 CENPBP07199 599 aaPredicted RBP30.06■■■□□ 2.4
FAM20B-201ENST00000263733 ZEB1P37275 1124 aaPredicted RBP29.96■■■□□ 2.39
FAM20B-201ENST00000263733 CCER1Q8TC90 406 aaPredicted RBP29.92■■■□□ 2.38
FAM20B-201ENST00000263733 TRIM41Q8WV44 630 aa29.71■■■□□ 2.35
FAM20B-201ENST00000263733 YTHDC1Q96MU7 727 aaKnown RBP29.68■■■□□ 2.34
FAM20B-201ENST00000263733 RANGAP1P46060 587 aaPredicted RBP29.68■■■□□ 2.34
FAM20B-201ENST00000263733 ERICH6Q7L0X2 663 aa29.62■■■□□ 2.33
FAM20B-201ENST00000263733 HRCP23327 699 aa29.56■■■□□ 2.32
FAM20B-201ENST00000263733 PPARGC1BQ86YN6 1023 aaKnown RBP29.52■■■□□ 2.32
FAM20B-201ENST00000263733 MYT1Q01538 1121 aa29.33■■■□□ 2.29
FAM20B-201ENST00000263733 TRIM26Q12899 539 aaPredicted RBP29.31■■■□□ 2.28
FAM20B-201ENST00000263733 UBTFP17480 764 aaKnown RBP29.25■■■□□ 2.27
FAM20B-201ENST00000263733 LOC105371045A0A1W2PR82 267 aa29.13■■■□□ 2.25
FAM20B-201ENST00000263733 NEFLP07196 543 aa29.13■■■□□ 2.25
FAM20B-201ENST00000263733 ATP1B4Q9UN42 357 aaPredicted RBP29.11■■■□□ 2.25
FAM20B-201ENST00000263733 CHIC1Q5VXU3 224 aa28.94■■■□□ 2.22
FAM20B-201ENST00000263733 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.6■■■□□ 2.17
FAM20B-201ENST00000263733 HNRNPUL2Q1KMD3 747 aaKnown RBP28.59■■■□□ 2.17
FAM20B-201ENST00000263733 ITGAEP38570 1179 aa28.57■■■□□ 2.16
FAM20B-201ENST00000263733 DIEXFQ68CQ4 756 aaKnown RBP28.51■■■□□ 2.16
FAM20B-201ENST00000263733 GTF3C3Q9Y5Q9 886 aa28.3■■■□□ 2.12
FAM20B-201ENST00000263733 POLR3GLQ9BT43 218 aa28.26■■■□□ 2.12
FAM20B-201ENST00000263733 CNGB1Q14028 1251 aaPredicted RBP28.26■■■□□ 2.11
FAM20B-201ENST00000263733 DAXXQ9UER7 740 aaPredicted RBP28.13■■■□□ 2.09
FAM20B-201ENST00000263733 BCANQ96GW7 911 aa28.04■■■□□ 2.08
FAM20B-201ENST00000263733 ACIN1Q9UKV3 1341 aaKnown RBP27.85■■■□□ 2.05
FAM20B-201ENST00000263733 RTL5Q5HYW3 569 aaPredicted RBP27.83■■■□□ 2.05
FAM20B-201ENST00000263733 NEUROD1Q13562 356 aa27.72■■■□□ 2.03
FAM20B-201ENST00000263733 ZNF316A6NFI3 1004 aaPredicted RBP27.71■■■□□ 2.03
FAM20B-201ENST00000263733 FAM50AQ14320 339 aaKnown RBP27.66■■■□□ 2.02
FAM20B-201ENST00000263733 CLSPNQ9HAW4 1339 aa27.53■■■□□ 2
FAM20B-201ENST00000263733 MYT1LQ9UL68 1186 aa27.51■■□□□ 1.99
FAM20B-201ENST00000263733 CDK11AQ9UQ88 783 aaPredicted RBP27.48■■□□□ 1.99
FAM20B-201ENST00000263733 ANP32CO43423 234 aa27.47■■□□□ 1.99
FAM20B-201ENST00000263733 TRIM52Q96A61 297 aa27.42■■□□□ 1.98
FAM20B-201ENST00000263733 SLC4A1APQ9BWU0 796 aaKnown RBP27.36■■□□□ 1.97
FAM20B-201ENST00000263733 SCAF1Q9H7N4 1312 aaKnown RBP27.32■■□□□ 1.96
FAM20B-201ENST00000263733 ZNF326Q5BKZ1 582 aaKnown RBP27.23■■□□□ 1.95
FAM20B-201ENST00000263733 FKBP8Q14318 412 aa27.17■■□□□ 1.94
FAM20B-201ENST00000263733 DCAF1Q9Y4B6 1507 aa27.09■■□□□ 1.93
FAM20B-201ENST00000263733 PABPN1Q86U42 306 aaKnown RBP eCLIP27.08■■□□□ 1.93
FAM20B-201ENST00000263733 CSRNP3Q8WYN3 585 aa27.03■■□□□ 1.92
FAM20B-201ENST00000263733 NPM2Q86SE8 214 aaKnown RBP27.01■■□□□ 1.91
FAM20B-201ENST00000263733 ANP32AP39687 249 aaKnown RBP26.99■■□□□ 1.91
FAM20B-201ENST00000263733 P3H3Q8IVL6 736 aa26.94■■□□□ 1.9
FAM20B-201ENST00000263733 DDX10Q13206 875 aaKnown RBP26.91■■□□□ 1.9
FAM20B-201ENST00000263733 MIER1Q8N108 512 aa26.89■■□□□ 1.9
FAM20B-201ENST00000263733 ABCC9O60706 1549 aa26.86■■□□□ 1.89
FAM20B-201ENST00000263733 HNRNPUQ00839 825 aaKnown RBP eCLIP26.84■■□□□ 1.89
FAM20B-201ENST00000263733 BCL11AQ9H165 835 aa26.84■■□□□ 1.89
FAM20B-201ENST00000263733 EIF5BO60841 1220 aaKnown RBP26.8■■□□□ 1.88
FAM20B-201ENST00000263733 ARID3CA6NKF2 412 aa26.78■■□□□ 1.88
FAM20B-201ENST00000263733 MYO15BQ96JP2 1530 aa26.78■■□□□ 1.88
FAM20B-201ENST00000263733 CANXP27824 592 aaKnown RBP26.77■■□□□ 1.88
FAM20B-201ENST00000263733 NBR1Q14596 966 aa26.73■■□□□ 1.87
FAM20B-201ENST00000263733 FAM9BQ8IZU0 186 aa26.73■■□□□ 1.87
FAM20B-201ENST00000263733 IRX6P78412 446 aaPredicted RBP26.65■■□□□ 1.86
FAM20B-201ENST00000263733 TONSLQ96HA7 1378 aa26.62■■□□□ 1.85
FAM20B-201ENST00000263733 ZBTB47Q9UFB7 747 aaPredicted RBP26.61■■□□□ 1.85
FAM20B-201ENST00000263733 SALL2Q9Y467 1007 aaPredicted RBP26.59■■□□□ 1.85
FAM20B-201ENST00000263733 HIRIP3Q9BW71 556 aaPredicted RBP26.58■■□□□ 1.85
FAM20B-201ENST00000263733 CCDC136Q96JN2 1154 aa26.51■■□□□ 1.83
FAM20B-201ENST00000263733 ZNF777Q9ULD5 760 aaPredicted RBP26.49■■□□□ 1.83
FAM20B-201ENST00000263733 FBLN2P98095 1184 aa26.48■■□□□ 1.83
FAM20B-201ENST00000263733 MRS2Q9HD23 443 aa26.37■■□□□ 1.81
FAM20B-201ENST00000263733 ARXQ96QS3 562 aa26.36■■□□□ 1.81
FAM20B-201ENST00000263733 SLC24A1O60721 1099 aa26.35■■□□□ 1.81
FAM20B-201ENST00000263733 ANP32EQ9BTT0 268 aa26.35■■□□□ 1.81
FAM20B-201ENST00000263733 CHIC2Q9UKJ5 165 aa26.34■■□□□ 1.81
FAM20B-201ENST00000263733 ZCCHC6Q5VYS8 1495 aaKnown RBP26.33■■□□□ 1.8
FAM20B-201ENST00000263733 TMC1Q8TDI8 760 aa26.32■■□□□ 1.8
FAM20B-201ENST00000263733 SCRIBQ14160 1630 aa26.3■■□□□ 1.8
FAM20B-201ENST00000263733 HSP90AA1P07900 732 aaKnown RBP26.27■■□□□ 1.8
FAM20B-201ENST00000263733 NEFMP07197 916 aa26.25■■□□□ 1.79
FAM20B-201ENST00000263733 UPF2Q9HAU5 1272 aaKnown RBP26.22■■□□□ 1.79
FAM20B-201ENST00000263733 ANP32BQ92688 251 aaKnown RBP26.21■■□□□ 1.79
FAM20B-201ENST00000263733 SENP3-EIF4A1A0A087X0R7 540 aa26.21■■□□□ 1.79
FAM20B-201ENST00000263733 CCDC180Q9P1Z9 1646 aa26.18■■□□□ 1.78
FAM20B-201ENST00000263733 SUPT16HQ9Y5B9 1047 aaKnown RBP26.14■■□□□ 1.78
FAM20B-201ENST00000263733 CLIP1P30622 1438 aa26.13■■□□□ 1.77
FAM20B-201ENST00000263733 KDM2AQ9Y2K7 1162 aa26.09■■□□□ 1.77
FAM20B-201ENST00000263733 GLIPR1L2Q4G1C9 344 aa26.08■■□□□ 1.77
FAM20B-201ENST00000263733 CEP162Q5TB80 1403 aa26.07■■□□□ 1.76
FAM20B-201ENST00000263733 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.03■■□□□ 1.76
FAM20B-201ENST00000263733 EIF4G2P78344 907 aaKnown RBP eCLIP26.03■■□□□ 1.76
FAM20B-201ENST00000263733 CHGAP10645 457 aaKnown RBP26■■□□□ 1.75
FAM20B-201ENST00000263733 WDR43Q15061 677 aaKnown RBP eCLIP25.99■■□□□ 1.75
FAM20B-201ENST00000263733 RRP7BPQ9NSQ0 103 aa25.96■■□□□ 1.75
FAM20B-201ENST00000263733 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.96■■□□□ 1.75
FAM20B-201ENST00000263733 RTN4Q9NQC3 1192 aaKnown RBP25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms