RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 DCAF8L2P0C7V8 631 aa34.86■■■■□ 3.17
PCDH8-202ENST00000377942 NISCHQ9Y2I1 1504 aa34.84■■■■□ 3.17
PCDH8-202ENST00000377942 SUPT5HO00267 1087 aaKnown RBP32.87■■■□□ 2.85
PCDH8-202ENST00000377942 SHROOM4Q9ULL8 1493 aa32.55■■■□□ 2.8
PCDH8-202ENST00000377942 EHMT2Q96KQ7 1210 aa31.27■■■□□ 2.6
PCDH8-202ENST00000377942 APLP2Q06481 763 aa31.14■■■□□ 2.58
PCDH8-202ENST00000377942 FAM9AQ8IZU1 332 aaPredicted RBP30.95■■■□□ 2.55
PCDH8-202ENST00000377942 TRIM41Q8WV44 630 aa30.69■■■□□ 2.5
PCDH8-202ENST00000377942 UBTFP17480 764 aaKnown RBP30.2■■■□□ 2.43
PCDH8-202ENST00000377942 RANGAP1P46060 587 aaPredicted RBP30.19■■■□□ 2.42
PCDH8-202ENST00000377942 TTBK1Q5TCY1 1321 aaPredicted RBP30.16■■■□□ 2.42
PCDH8-202ENST00000377942 PCGF6Q9BYE7 350 aa30.1■■■□□ 2.41
PCDH8-202ENST00000377942 ATP1B4Q9UN42 357 aaPredicted RBP30.03■■■□□ 2.4
PCDH8-202ENST00000377942 PELP1Q8IZL8 1130 aaKnown RBP29.94■■■□□ 2.38
PCDH8-202ENST00000377942 ABCC9O60706 1549 aa29.9■■■□□ 2.38
PCDH8-202ENST00000377942 ZEB1P37275 1124 aaPredicted RBP29.87■■■□□ 2.37
PCDH8-202ENST00000377942 CCER1Q8TC90 406 aaPredicted RBP29.71■■■□□ 2.35
PCDH8-202ENST00000377942 CHIC1Q5VXU3 224 aa29.48■■■□□ 2.31
PCDH8-202ENST00000377942 PABPN1Q86U42 306 aaKnown RBP eCLIP29.47■■■□□ 2.31
PCDH8-202ENST00000377942 TRIM26Q12899 539 aaPredicted RBP29.27■■■□□ 2.28
PCDH8-202ENST00000377942 CENPBP07199 599 aaPredicted RBP29.22■■■□□ 2.27
PCDH8-202ENST00000377942 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.2■■■□□ 2.26
PCDH8-202ENST00000377942 HNRNPUL2Q1KMD3 747 aaKnown RBP29.2■■■□□ 2.26
PCDH8-202ENST00000377942 PPARGC1BQ86YN6 1023 aaKnown RBP29.19■■■□□ 2.26
PCDH8-202ENST00000377942 LOC105371045A0A1W2PR82 267 aa29.12■■■□□ 2.25
PCDH8-202ENST00000377942 MYT1LQ9UL68 1186 aa28.95■■■□□ 2.22
PCDH8-202ENST00000377942 ITGAEP38570 1179 aa28.92■■■□□ 2.22
PCDH8-202ENST00000377942 CCDC180Q9P1Z9 1646 aa28.89■■■□□ 2.21
PCDH8-202ENST00000377942 ZCCHC6Q5VYS8 1495 aaKnown RBP28.86■■■□□ 2.21
PCDH8-202ENST00000377942 SCRIBQ14160 1630 aa28.67■■■□□ 2.18
PCDH8-202ENST00000377942 NEFLP07196 543 aa28.66■■■□□ 2.18
PCDH8-202ENST00000377942 HRCP23327 699 aa28.55■■■□□ 2.16
PCDH8-202ENST00000377942 YTHDC1Q96MU7 727 aaKnown RBP28.46■■■□□ 2.15
PCDH8-202ENST00000377942 FAM50AQ14320 339 aaKnown RBP28.44■■■□□ 2.14
PCDH8-202ENST00000377942 ERICH6Q7L0X2 663 aa28.4■■■□□ 2.14
PCDH8-202ENST00000377942 CSRNP3Q8WYN3 585 aa28.39■■■□□ 2.14
PCDH8-202ENST00000377942 FBLN2P98095 1184 aa28.39■■■□□ 2.13
PCDH8-202ENST00000377942 POLR3GLQ9BT43 218 aa28.37■■■□□ 2.13
PCDH8-202ENST00000377942 RB1CC1Q8TDY2 1594 aa28.3■■■□□ 2.12
PCDH8-202ENST00000377942 TRIM52Q96A61 297 aa28.23■■■□□ 2.11
PCDH8-202ENST00000377942 NACADO15069 1562 aa28.1■■■□□ 2.09
PCDH8-202ENST00000377942 CDK11AQ9UQ88 783 aaPredicted RBP28.01■■■□□ 2.08
PCDH8-202ENST00000377942 P3H3Q8IVL6 736 aa28.01■■■□□ 2.07
PCDH8-202ENST00000377942 SLC4A1APQ9BWU0 796 aaKnown RBP27.93■■■□□ 2.06
PCDH8-202ENST00000377942 NEUROD1Q13562 356 aa27.92■■■□□ 2.06
PCDH8-202ENST00000377942 CNGB1Q14028 1251 aaPredicted RBP27.88■■■□□ 2.05
PCDH8-202ENST00000377942 DIEXFQ68CQ4 756 aaKnown RBP27.85■■■□□ 2.05
PCDH8-202ENST00000377942 ARID3CA6NKF2 412 aa27.78■■■□□ 2.04
PCDH8-202ENST00000377942 DCAF1Q9Y4B6 1507 aa27.74■■■□□ 2.03
PCDH8-202ENST00000377942 RSF1Q96T23 1441 aaPredicted RBP27.74■■■□□ 2.03
PCDH8-202ENST00000377942 ZNF326Q5BKZ1 582 aaKnown RBP27.69■■■□□ 2.02
PCDH8-202ENST00000377942 ZNF777Q9ULD5 760 aaPredicted RBP27.69■■■□□ 2.02
PCDH8-202ENST00000377942 NPM1P06748 294 aaKnown RBP eCLIP27.63■■■□□ 2.01
PCDH8-202ENST00000377942 DAXXQ9UER7 740 aaPredicted RBP27.61■■■□□ 2.01
PCDH8-202ENST00000377942 BAZ1BQ9UIG0 1483 aaKnown RBP27.6■■■□□ 2.01
PCDH8-202ENST00000377942 ANP32CO43423 234 aa27.56■■■□□ 2
PCDH8-202ENST00000377942 EEA1Q15075 1411 aa27.55■■■□□ 2
PCDH8-202ENST00000377942 CHMP7Q8WUX9 453 aaPredicted RBP27.51■■■□□ 2
PCDH8-202ENST00000377942 ZNF316A6NFI3 1004 aaPredicted RBP27.48■■□□□ 1.99
PCDH8-202ENST00000377942 BAZ1AQ9NRL2 1556 aaPredicted RBP27.47■■□□□ 1.99
PCDH8-202ENST00000377942 ESF1Q9H501 851 aaKnown RBP27.41■■□□□ 1.98
PCDH8-202ENST00000377942 WRNQ14191 1432 aaPredicted RBP eCLIP27.41■■□□□ 1.98
PCDH8-202ENST00000377942 CLIP1P30622 1438 aa27.36■■□□□ 1.97
PCDH8-202ENST00000377942 BCANQ96GW7 911 aa27.36■■□□□ 1.97
PCDH8-202ENST00000377942 MTUS2Q5JR59 1369 aa27.33■■□□□ 1.97
PCDH8-202ENST00000377942 MYT1Q01538 1121 aa27.31■■□□□ 1.96
PCDH8-202ENST00000377942 GOLGA3Q08378 1498 aa27.29■■□□□ 1.96
PCDH8-202ENST00000377942 TONSLQ96HA7 1378 aa27.29■■□□□ 1.96
PCDH8-202ENST00000377942 KIF27Q86VH2 1401 aa27.27■■□□□ 1.96
PCDH8-202ENST00000377942 TSPY4P0CV99 314 aa27.27■■□□□ 1.96
PCDH8-202ENST00000377942 TSPY10P0CW01 314 aa27.27■■□□□ 1.96
PCDH8-202ENST00000377942 CLSPNQ9HAW4 1339 aa27.25■■□□□ 1.95
PCDH8-202ENST00000377942 NEFMP07197 916 aa27.21■■□□□ 1.95
PCDH8-202ENST00000377942 CECR2Q9BXF3 1484 aa27.18■■□□□ 1.94
PCDH8-202ENST00000377942 STAG3Q9UJ98 1225 aa27.16■■□□□ 1.94
PCDH8-202ENST00000377942 CHIC2Q9UKJ5 165 aa27.14■■□□□ 1.94
PCDH8-202ENST00000377942 CHGAP10645 457 aaKnown RBP27.13■■□□□ 1.93
PCDH8-202ENST00000377942 CEP164Q9UPV0 1460 aa27.1■■□□□ 1.93
PCDH8-202ENST00000377942 PLEKHD1A6NEE1 506 aa27.09■■□□□ 1.93
PCDH8-202ENST00000377942 ACIN1Q9UKV3 1341 aaKnown RBP27.08■■□□□ 1.93
PCDH8-202ENST00000377942 CEP162Q5TB80 1403 aa27.08■■□□□ 1.93
PCDH8-202ENST00000377942 ERCC6Q03468 1493 aa27.06■■□□□ 1.92
PCDH8-202ENST00000377942 TNIKQ9UKE5 1360 aa27.05■■□□□ 1.92
PCDH8-202ENST00000377942 MYO15BQ96JP2 1530 aa27.04■■□□□ 1.92
PCDH8-202ENST00000377942 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.03■■□□□ 1.92
PCDH8-202ENST00000377942 ZBTB47Q9UFB7 747 aaPredicted RBP27.01■■□□□ 1.92
PCDH8-202ENST00000377942 SMARCA2P51531 1590 aa26.95■■□□□ 1.9
PCDH8-202ENST00000377942 CANXP27824 592 aaKnown RBP26.93■■□□□ 1.9
PCDH8-202ENST00000377942 KCNH8Q96L42 1107 aa26.89■■□□□ 1.89
PCDH8-202ENST00000377942 MROH2BQ7Z745 1585 aa26.87■■□□□ 1.89
PCDH8-202ENST00000377942 SLC24A1O60721 1099 aa26.85■■□□□ 1.89
PCDH8-202ENST00000377942 GTF3C3Q9Y5Q9 886 aa26.82■■□□□ 1.88
PCDH8-202ENST00000377942 RRP7BPQ9NSQ0 103 aa26.81■■□□□ 1.88
PCDH8-202ENST00000377942 CFDP1Q9UEE9 299 aaPredicted RBP26.81■■□□□ 1.88
PCDH8-202ENST00000377942 CARMIL1Q5VZK9 1371 aa26.79■■□□□ 1.88
PCDH8-202ENST00000377942 CUX2O14529 1486 aa26.78■■□□□ 1.88
PCDH8-202ENST00000377942 CCDC88BA6NC98 1476 aa26.78■■□□□ 1.88
PCDH8-202ENST00000377942 RTL5Q5HYW3 569 aaPredicted RBP26.78■■□□□ 1.88
PCDH8-202ENST00000377942 PDS5BQ9NTI5 1447 aa26.77■■□□□ 1.88
PCDH8-202ENST00000377942 DDX10Q13206 875 aaKnown RBP26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms