RNA–Protein interactions for RNA: ENST00000430801.5

APTR-203, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 5 BASIC

Gene APTR, Length 583 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-203ENST00000430801 NISCHQ9Y2I1 1504 aa51.09■■■■■ 5.77
APTR-203ENST00000430801 CCDC180Q9P1Z9 1646 aa45.52■■■■■ 4.88
APTR-203ENST00000430801 ABCC9O60706 1549 aa44.74■■■■■ 4.75
APTR-203ENST00000430801 RB1CC1Q8TDY2 1594 aa42.93■■■■■ 4.46
APTR-203ENST00000430801 NACADO15069 1562 aa42.84■■■■■ 4.45
APTR-203ENST00000430801 DCAF8L2P0C7V8 631 aa42.59■■■■■ 4.41
APTR-203ENST00000430801 MYO15BQ96JP2 1530 aa42.56■■■■■ 4.4
APTR-203ENST00000430801 ZCCHC6Q5VYS8 1495 aaKnown RBP42.55■■■■■ 4.4
APTR-203ENST00000430801 DCAF1Q9Y4B6 1507 aa42.29■■■■■ 4.36
APTR-203ENST00000430801 UNC13AQ9UPW8 1703 aa41.95■■■■■ 4.31
APTR-203ENST00000430801 PABPN1Q86U42 306 aaKnown RBP eCLIP41.72■■■■■ 4.27
APTR-203ENST00000430801 BICRAQ9NZM4 1560 aa41.71■■■■■ 4.27
APTR-203ENST00000430801 SCRIBQ14160 1630 aa41.51■■■■■ 4.23
APTR-203ENST00000430801 DNAJC5BQ9UF47 199 aa41.29■■■■■ 4.2
APTR-203ENST00000430801 SHROOM4Q9ULL8 1493 aa41.24■■■■■ 4.19
APTR-203ENST00000430801 EIF4G1Q04637 1599 aaKnown RBP40.6■■■■■ 4.09
APTR-203ENST00000430801 CC2D2AQ9P2K1 1620 aa40.46■■■■■ 4.07
APTR-203ENST00000430801 CECR2Q9BXF3 1484 aa40.22■■■■■ 4.03
APTR-203ENST00000430801 SMARCA4P51532 1647 aa39.69■■■■□ 3.94
APTR-203ENST00000430801 BAZ1AQ9NRL2 1556 aaPredicted RBP39.59■■■■□ 3.93
APTR-203ENST00000430801 NCAPD3P42695 1498 aa39.55■■■■□ 3.92
APTR-203ENST00000430801 ATAD2BQ9ULI0 1458 aa39.55■■■■□ 3.92
APTR-203ENST00000430801 SMARCA2P51531 1590 aa39.46■■■■□ 3.91
APTR-203ENST00000430801 MROH2BQ7Z745 1585 aa39.38■■■■□ 3.9
APTR-203ENST00000430801 HMGXB3Q12766 1538 aa39.35■■■■□ 3.89
APTR-203ENST00000430801 PEG3Q9GZU2 1588 aa39.34■■■■□ 3.89
APTR-203ENST00000430801 BAZ1BQ9UIG0 1483 aaKnown RBP39.17■■■■□ 3.86
APTR-203ENST00000430801 WIZO95785 1651 aa38.91■■■■□ 3.82
APTR-203ENST00000430801 RSF1Q96T23 1441 aaPredicted RBP38.83■■■■□ 3.81
APTR-203ENST00000430801 NESP48681 1621 aa38.67■■■■□ 3.78
APTR-203ENST00000430801 ERCC6Q03468 1493 aa38.54■■■■□ 3.76
APTR-203ENST00000430801 LAMC3Q9Y6N6 1575 aa38.53■■■■□ 3.76
APTR-203ENST00000430801 TOP2AP11388 1531 aaKnown RBP38.52■■■■□ 3.76
APTR-203ENST00000430801 CADPSQ9ULU8 1353 aa38.36■■■■□ 3.73
APTR-203ENST00000430801 CUX2O14529 1486 aa38.28■■■■□ 3.72
APTR-203ENST00000430801 PDS5BQ9NTI5 1447 aa38.24■■■■□ 3.71
APTR-203ENST00000430801 KIF21AQ7Z4S6 1674 aa38.18■■■■□ 3.7
APTR-203ENST00000430801 THOC2Q8NI27 1593 aaKnown RBP38.18■■■■□ 3.7
APTR-203ENST00000430801 CFTRP13569 1480 aa38.11■■■■□ 3.69
APTR-203ENST00000430801 CCDC88BA6NC98 1476 aa38.04■■■■□ 3.68
APTR-203ENST00000430801 FANCD2Q9BXW9 1451 aa37.93■■■■□ 3.66
APTR-203ENST00000430801 MRC2Q9UBG0 1479 aa37.9■■■■□ 3.66
APTR-203ENST00000430801 CEP164Q9UPV0 1460 aa37.9■■■■□ 3.66
APTR-203ENST00000430801 WDR62O43379 1518 aa37.82■■■■□ 3.64
APTR-203ENST00000430801 PRDM2Q13029 1718 aa37.75■■■■□ 3.63
APTR-203ENST00000430801 URB2Q14146 1524 aaKnown RBP37.6■■■■□ 3.61
APTR-203ENST00000430801 SUPT5HO00267 1087 aaKnown RBP37.55■■■■□ 3.6
APTR-203ENST00000430801 TOPBP1Q92547 1522 aa37.31■■■■□ 3.56
APTR-203ENST00000430801 DNAJC5Q9H3Z4 198 aa37.31■■■■□ 3.56
APTR-203ENST00000430801 DNMBPQ6XZF7 1577 aa37.25■■■■□ 3.55
APTR-203ENST00000430801 ABCC8Q09428 1581 aa37.24■■■■□ 3.55
APTR-203ENST00000430801 IFT140Q96RY7 1462 aa37.12■■■■□ 3.53
APTR-203ENST00000430801 ZNF608Q9ULD9 1512 aaPredicted RBP37■■■■□ 3.51
APTR-203ENST00000430801 POLA1P09884 1462 aaPredicted RBP36.99■■■■□ 3.51
APTR-203ENST00000430801 CUX1P39880 1505 aa36.96■■■■□ 3.51
APTR-203ENST00000430801 TARBP1Q13395 1621 aaKnown RBP36.94■■■■□ 3.5
APTR-203ENST00000430801 FGD5Q6ZNL6 1462 aa36.86■■■■□ 3.49
APTR-203ENST00000430801 EIF4G3O43432 1585 aaKnown RBP36.84■■■■□ 3.49
APTR-203ENST00000430801 RAD54L2Q9Y4B4 1467 aa36.82■■■■□ 3.48
APTR-203ENST00000430801 SOGA1O94964 1423 aa36.77■■■■□ 3.48
APTR-203ENST00000430801 AQRO60306 1485 aaKnown RBP eCLIP36.72■■■■□ 3.47
APTR-203ENST00000430801 WDR97A6NE52 1622 aa36.62■■■■□ 3.45
APTR-203ENST00000430801 TDRD9Q8NDG6 1382 aaKnown RBP36.6■■■■□ 3.45
APTR-203ENST00000430801 WRNQ14191 1432 aaPredicted RBP eCLIP36.59■■■■□ 3.45
APTR-203ENST00000430801 BIVM-ERCC5R4GMW8 1640 aa36.57■■■■□ 3.44
APTR-203ENST00000430801 SYNJ1O43426 1573 aa36.57■■■■□ 3.44
APTR-203ENST00000430801 TOP2BQ02880 1626 aa36.56■■■■□ 3.44
APTR-203ENST00000430801 OSCARQ8IYS5 282 aa36.54■■■■□ 3.44
APTR-203ENST00000430801 ABCA10Q8WWZ4 1543 aa36.5■■■■□ 3.43
APTR-203ENST00000430801 SNAPC4Q5SXM2 1469 aa36.41■■■■□ 3.42
APTR-203ENST00000430801 GRIN2BQ13224 1484 aa36.4■■■■□ 3.42
APTR-203ENST00000430801 ABCA5Q8WWZ7 1642 aa36.4■■■■□ 3.42
APTR-203ENST00000430801 CHD1O14646 1710 aa36.37■■■■□ 3.41
APTR-203ENST00000430801 GAPVD1Q14C86 1478 aa36.37■■■■□ 3.41
APTR-203ENST00000430801 MAGI1Q96QZ7 1491 aaPredicted RBP36.34■■■■□ 3.41
APTR-203ENST00000430801 PBRM1Q86U86 1689 aa36.3■■■■□ 3.4
APTR-203ENST00000430801 FBLN2P98095 1184 aa36.22■■■■□ 3.39
APTR-203ENST00000430801 SYNJ2O15056 1496 aa36.2■■■■□ 3.39
APTR-203ENST00000430801 CHMP7Q8WUX9 453 aaPredicted RBP36.11■■■■□ 3.37
APTR-203ENST00000430801 RIMBP3CA6NJZ7 1639 aa36.08■■■■□ 3.37
APTR-203ENST00000430801 RIMBP3BA6NNM3 1639 aa36.08■■■■□ 3.37
APTR-203ENST00000430801 RIMBP3Q9UFD9 1639 aa36.08■■■■□ 3.37
APTR-203ENST00000430801 ADAMTS12P58397 1594 aa36.06■■■■□ 3.36
APTR-203ENST00000430801 ARHGEF11O15085 1522 aa36.06■■■■□ 3.36
APTR-203ENST00000430801 CLASP1Q7Z460 1538 aa36.06■■■■□ 3.36
APTR-203ENST00000430801 ERICH3Q5RHP9 1530 aa36.04■■■■□ 3.36
APTR-203ENST00000430801 GRIN2AQ12879 1464 aa35.95■■■■□ 3.35
APTR-203ENST00000430801 FHAD1B1AJZ9 1412 aa35.95■■■■□ 3.35
APTR-203ENST00000430801 TRIM41Q8WV44 630 aa35.93■■■■□ 3.34
APTR-203ENST00000430801 NUP160Q12769 1436 aa35.83■■■■□ 3.33
APTR-203ENST00000430801 KIF27Q86VH2 1401 aa35.83■■■■□ 3.33
APTR-203ENST00000430801 CEP170Q5SW79 1584 aa35.81■■■■□ 3.32
APTR-203ENST00000430801 ARAP1Q96P48 1450 aa35.79■■■■□ 3.32
APTR-203ENST00000430801 IGF1RP08069 1367 aa35.74■■■■□ 3.31
APTR-203ENST00000430801 CUL7Q14999 1698 aa35.65■■■■□ 3.3
APTR-203ENST00000430801 CYB5RLQ6IPT4 315 aa35.63■■■■□ 3.29
APTR-203ENST00000430801 SHROOM2Q13796 1616 aa35.58■■■■□ 3.29
APTR-203ENST00000430801 RUSC2Q8N2Y8 1516 aa35.54■■■■□ 3.28
APTR-203ENST00000430801 ERCC6L2Q5T890 1561 aa35.53■■■■□ 3.28
APTR-203ENST00000430801 CARMIL1Q5VZK9 1371 aa35.5■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms