RNA–Protein interactions for RNA: ENST00000308208.9

CCDC63-201, Transcript of coiled-coil domain containing 63, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CCDC63, Length 1,993 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63-201ENST00000308208 NISCHQ9Y2I1 1504 aa48.21■■■■■ 5.31
CCDC63-201ENST00000308208 CCDC180Q9P1Z9 1646 aa42.41■■■■■ 4.38
CCDC63-201ENST00000308208 ABCC9O60706 1549 aa41.27■■■■■ 4.2
CCDC63-201ENST00000308208 DCAF8L2P0C7V8 631 aa40.46■■■■■ 4.07
CCDC63-201ENST00000308208 ZCCHC6Q5VYS8 1495 aaKnown RBP40.25■■■■■ 4.03
CCDC63-201ENST00000308208 NACADO15069 1562 aa39.76■■■■□ 3.96
CCDC63-201ENST00000308208 DCAF1Q9Y4B6 1507 aa39.7■■■■□ 3.95
CCDC63-201ENST00000308208 RB1CC1Q8TDY2 1594 aa39.7■■■■□ 3.95
CCDC63-201ENST00000308208 MYO15BQ96JP2 1530 aa39.58■■■■□ 3.93
CCDC63-201ENST00000308208 SCRIBQ14160 1630 aa39.06■■■■□ 3.84
CCDC63-201ENST00000308208 UNC13AQ9UPW8 1703 aa39.01■■■■□ 3.84
CCDC63-201ENST00000308208 SHROOM4Q9ULL8 1493 aa38.88■■■■□ 3.82
CCDC63-201ENST00000308208 PABPN1Q86U42 306 aaKnown RBP eCLIP38.82■■■■□ 3.8
CCDC63-201ENST00000308208 BICRAQ9NZM4 1560 aa38.6■■■■□ 3.77
CCDC63-201ENST00000308208 CECR2Q9BXF3 1484 aa37.67■■■■□ 3.62
CCDC63-201ENST00000308208 EIF4G1Q04637 1599 aaKnown RBP37.52■■■■□ 3.6
CCDC63-201ENST00000308208 DNAJC5BQ9UF47 199 aa37.46■■■■□ 3.59
CCDC63-201ENST00000308208 MROH2BQ7Z745 1585 aa37.29■■■■□ 3.56
CCDC63-201ENST00000308208 SMARCA4P51532 1647 aa37.29■■■■□ 3.56
CCDC63-201ENST00000308208 BAZ1AQ9NRL2 1556 aaPredicted RBP37.26■■■■□ 3.56
CCDC63-201ENST00000308208 CC2D2AQ9P2K1 1620 aa37.26■■■■□ 3.56
CCDC63-201ENST00000308208 RSF1Q96T23 1441 aaPredicted RBP37.05■■■■□ 3.52
CCDC63-201ENST00000308208 WIZO95785 1651 aa36.96■■■■□ 3.51
CCDC63-201ENST00000308208 ATAD2BQ9ULI0 1458 aa36.94■■■■□ 3.5
CCDC63-201ENST00000308208 SUPT5HO00267 1087 aaKnown RBP36.88■■■■□ 3.49
CCDC63-201ENST00000308208 SMARCA2P51531 1590 aa36.81■■■■□ 3.48
CCDC63-201ENST00000308208 PEG3Q9GZU2 1588 aa36.77■■■■□ 3.48
CCDC63-201ENST00000308208 NCAPD3P42695 1498 aa36.74■■■■□ 3.47
CCDC63-201ENST00000308208 BAZ1BQ9UIG0 1483 aaKnown RBP36.67■■■■□ 3.46
CCDC63-201ENST00000308208 HMGXB3Q12766 1538 aa36.56■■■■□ 3.44
CCDC63-201ENST00000308208 TOP2AP11388 1531 aaKnown RBP36.41■■■■□ 3.42
CCDC63-201ENST00000308208 CCDC88BA6NC98 1476 aa36.12■■■■□ 3.37
CCDC63-201ENST00000308208 NESP48681 1621 aa35.94■■■■□ 3.34
CCDC63-201ENST00000308208 CADPSQ9ULU8 1353 aa35.78■■■■□ 3.32
CCDC63-201ENST00000308208 CFTRP13569 1480 aa35.66■■■■□ 3.3
CCDC63-201ENST00000308208 LAMC3Q9Y6N6 1575 aa35.64■■■■□ 3.3
CCDC63-201ENST00000308208 KIF21AQ7Z4S6 1674 aa35.44■■■■□ 3.26
CCDC63-201ENST00000308208 ERCC6Q03468 1493 aa35.44■■■■□ 3.26
CCDC63-201ENST00000308208 PDS5BQ9NTI5 1447 aa35.43■■■■□ 3.26
CCDC63-201ENST00000308208 FANCD2Q9BXW9 1451 aa35.4■■■■□ 3.26
CCDC63-201ENST00000308208 PRDM2Q13029 1718 aa35.39■■■■□ 3.26
CCDC63-201ENST00000308208 CEP164Q9UPV0 1460 aa35.25■■■■□ 3.23
CCDC63-201ENST00000308208 ABCC8Q09428 1581 aa35.11■■■■□ 3.21
CCDC63-201ENST00000308208 THOC2Q8NI27 1593 aaKnown RBP35.05■■■■□ 3.2
CCDC63-201ENST00000308208 URB2Q14146 1524 aaKnown RBP35.04■■■■□ 3.2
CCDC63-201ENST00000308208 MRC2Q9UBG0 1479 aa35.04■■■■□ 3.2
CCDC63-201ENST00000308208 CUX1P39880 1505 aa34.91■■■■□ 3.18
CCDC63-201ENST00000308208 TOPBP1Q92547 1522 aa34.89■■■■□ 3.18
CCDC63-201ENST00000308208 WRNQ14191 1432 aaPredicted RBP eCLIP34.89■■■■□ 3.18
CCDC63-201ENST00000308208 WDR62O43379 1518 aa34.88■■■■□ 3.17
CCDC63-201ENST00000308208 DNMBPQ6XZF7 1577 aa34.84■■■■□ 3.17
CCDC63-201ENST00000308208 SYNJ1O43426 1573 aa34.83■■■■□ 3.17
CCDC63-201ENST00000308208 FGD5Q6ZNL6 1462 aa34.69■■■■□ 3.14
CCDC63-201ENST00000308208 TOP2BQ02880 1626 aa34.69■■■■□ 3.14
CCDC63-201ENST00000308208 POLA1P09884 1462 aaPredicted RBP34.67■■■■□ 3.14
CCDC63-201ENST00000308208 CHIC1Q5VXU3 224 aa34.66■■■■□ 3.14
CCDC63-201ENST00000308208 BIVM-ERCC5R4GMW8 1640 aa34.65■■■■□ 3.14
CCDC63-201ENST00000308208 TRIM41Q8WV44 630 aa34.64■■■■□ 3.14
CCDC63-201ENST00000308208 CUX2O14529 1486 aa34.64■■■■□ 3.14
CCDC63-201ENST00000308208 RAD54L2Q9Y4B4 1467 aa34.63■■■■□ 3.13
CCDC63-201ENST00000308208 SOGA1O94964 1423 aa34.55■■■■□ 3.12
CCDC63-201ENST00000308208 TARBP1Q13395 1621 aaKnown RBP34.45■■■■□ 3.11
CCDC63-201ENST00000308208 ZNF608Q9ULD9 1512 aaPredicted RBP34.44■■■■□ 3.1
CCDC63-201ENST00000308208 IFT140Q96RY7 1462 aa34.43■■■■□ 3.1
CCDC63-201ENST00000308208 TDRD9Q8NDG6 1382 aaKnown RBP34.4■■■■□ 3.1
CCDC63-201ENST00000308208 AQRO60306 1485 aaKnown RBP eCLIP34.35■■■■□ 3.09
CCDC63-201ENST00000308208 ABCA10Q8WWZ4 1543 aa34.27■■■■□ 3.08
CCDC63-201ENST00000308208 WDR97A6NE52 1622 aa34.27■■■■□ 3.08
CCDC63-201ENST00000308208 EIF4G3O43432 1585 aaKnown RBP34.21■■■■□ 3.07
CCDC63-201ENST00000308208 RUSC2Q8N2Y8 1516 aa34.21■■■■□ 3.07
CCDC63-201ENST00000308208 FAM9AQ8IZU1 332 aaPredicted RBP34.15■■■■□ 3.06
CCDC63-201ENST00000308208 GAPVD1Q14C86 1478 aa34.14■■■■□ 3.05
CCDC63-201ENST00000308208 ABCA5Q8WWZ7 1642 aa34.1■■■■□ 3.05
CCDC63-201ENST00000308208 KIF27Q86VH2 1401 aa34.06■■■■□ 3.04
CCDC63-201ENST00000308208 PBRM1Q86U86 1689 aa34.02■■■■□ 3.04
CCDC63-201ENST00000308208 GRIN2BQ13224 1484 aa33.97■■■■□ 3.03
CCDC63-201ENST00000308208 SNAPC4Q5SXM2 1469 aa33.94■■■■□ 3.02
CCDC63-201ENST00000308208 IGF1RP08069 1367 aa33.94■■■■□ 3.02
CCDC63-201ENST00000308208 FBLN2P98095 1184 aa33.92■■■■□ 3.02
CCDC63-201ENST00000308208 EHMT2Q96KQ7 1210 aa33.84■■■■□ 3.01
CCDC63-201ENST00000308208 ERICH3Q5RHP9 1530 aa33.84■■■■□ 3.01
CCDC63-201ENST00000308208 CSRNP3Q8WYN3 585 aa33.81■■■■□ 3
CCDC63-201ENST00000308208 CHMP7Q8WUX9 453 aaPredicted RBP33.78■■■■□ 3
CCDC63-201ENST00000308208 MAGI1Q96QZ7 1491 aaPredicted RBP33.77■■■■□ 3
CCDC63-201ENST00000308208 CARMIL1Q5VZK9 1371 aa33.74■■■□□ 2.99
CCDC63-201ENST00000308208 ADAMTS12P58397 1594 aa33.73■■■□□ 2.99
CCDC63-201ENST00000308208 CHD1O14646 1710 aa33.72■■■□□ 2.99
CCDC63-201ENST00000308208 FHAD1B1AJZ9 1412 aa33.69■■■□□ 2.98
CCDC63-201ENST00000308208 EEA1Q15075 1411 aa33.69■■■□□ 2.98
CCDC63-201ENST00000308208 SYNJ2O15056 1496 aa33.68■■■□□ 2.98
CCDC63-201ENST00000308208 CUL7Q14999 1698 aa33.65■■■□□ 2.98
CCDC63-201ENST00000308208 GRIN2AQ12879 1464 aa33.58■■■□□ 2.97
CCDC63-201ENST00000308208 PRXQ9BXM0 1461 aa33.57■■■□□ 2.96
CCDC63-201ENST00000308208 RAPGEF2Q9Y4G8 1499 aa33.55■■■□□ 2.96
CCDC63-201ENST00000308208 OSCARQ8IYS5 282 aa33.52■■■□□ 2.96
CCDC63-201ENST00000308208 CEP170Q5SW79 1584 aa33.44■■■□□ 2.94
CCDC63-201ENST00000308208 LOC105371045A0A1W2PR82 267 aa33.44■■■□□ 2.94
CCDC63-201ENST00000308208 KIF21BO75037 1637 aa33.38■■■□□ 2.93
CCDC63-201ENST00000308208 UBTFP17480 764 aaKnown RBP33.37■■■□□ 2.93
CCDC63-201ENST00000308208 NUP160Q12769 1436 aa33.35■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms