RNA–Protein interactions for RNA: ENST00000215071.8

PSMD8-201, Transcript of proteasome 26S subunit, non-ATPase 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMD8, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD8-201ENST00000215071 NISCHQ9Y2I1 1504 aa44.75■■■■■ 4.75
PSMD8-201ENST00000215071 CCDC180Q9P1Z9 1646 aa39.06■■■■□ 3.84
PSMD8-201ENST00000215071 ZCCHC6Q5VYS8 1495 aaKnown RBP37.61■■■■□ 3.61
PSMD8-201ENST00000215071 DCAF1Q9Y4B6 1507 aa37.12■■■■□ 3.53
PSMD8-201ENST00000215071 MYO15BQ96JP2 1530 aa36.7■■■■□ 3.47
PSMD8-201ENST00000215071 ABCC9O60706 1549 aa36.68■■■■□ 3.46
PSMD8-201ENST00000215071 DCAF8L2P0C7V8 631 aa36.66■■■■□ 3.46
PSMD8-201ENST00000215071 NACADO15069 1562 aa36.36■■■■□ 3.41
PSMD8-201ENST00000215071 SHROOM4Q9ULL8 1493 aa36.26■■■■□ 3.4
PSMD8-201ENST00000215071 RB1CC1Q8TDY2 1594 aa35.98■■■■□ 3.35
PSMD8-201ENST00000215071 SCRIBQ14160 1630 aa35.73■■■■□ 3.31
PSMD8-201ENST00000215071 UNC13AQ9UPW8 1703 aa35.27■■■■□ 3.24
PSMD8-201ENST00000215071 SUPT5HO00267 1087 aaKnown RBP34.95■■■■□ 3.18
PSMD8-201ENST00000215071 BICRAQ9NZM4 1560 aa34.9■■■■□ 3.18
PSMD8-201ENST00000215071 RSF1Q96T23 1441 aaPredicted RBP34.7■■■■□ 3.15
PSMD8-201ENST00000215071 CECR2Q9BXF3 1484 aa34.69■■■■□ 3.14
PSMD8-201ENST00000215071 BAZ1AQ9NRL2 1556 aaPredicted RBP34.56■■■■□ 3.12
PSMD8-201ENST00000215071 PABPN1Q86U42 306 aaKnown RBP eCLIP34.55■■■■□ 3.12
PSMD8-201ENST00000215071 MROH2BQ7Z745 1585 aa34.52■■■■□ 3.12
PSMD8-201ENST00000215071 SMARCA4P51532 1647 aa34.37■■■■□ 3.09
PSMD8-201ENST00000215071 WIZO95785 1651 aa34.22■■■■□ 3.07
PSMD8-201ENST00000215071 PEG3Q9GZU2 1588 aa34.06■■■■□ 3.04
PSMD8-201ENST00000215071 TOP2AP11388 1531 aaKnown RBP33.93■■■■□ 3.02
PSMD8-201ENST00000215071 EIF4G1Q04637 1599 aaKnown RBP33.82■■■■□ 3
PSMD8-201ENST00000215071 SMARCA2P51531 1590 aa33.81■■■■□ 3
PSMD8-201ENST00000215071 ATAD2BQ9ULI0 1458 aa33.79■■■■□ 3
PSMD8-201ENST00000215071 CHIC1Q5VXU3 224 aa33.63■■■□□ 2.97
PSMD8-201ENST00000215071 NCAPD3P42695 1498 aa33.56■■■□□ 2.96
PSMD8-201ENST00000215071 BAZ1BQ9UIG0 1483 aaKnown RBP33.56■■■□□ 2.96
PSMD8-201ENST00000215071 CCDC88BA6NC98 1476 aa33.55■■■□□ 2.96
PSMD8-201ENST00000215071 HMGXB3Q12766 1538 aa33.51■■■□□ 2.95
PSMD8-201ENST00000215071 CC2D2AQ9P2K1 1620 aa33.28■■■□□ 2.92
PSMD8-201ENST00000215071 DNAJC5BQ9UF47 199 aa33.2■■■□□ 2.91
PSMD8-201ENST00000215071 TRIM41Q8WV44 630 aa32.96■■■□□ 2.87
PSMD8-201ENST00000215071 CFTRP13569 1480 aa32.8■■■□□ 2.84
PSMD8-201ENST00000215071 ABCC8Q09428 1581 aa32.78■■■□□ 2.84
PSMD8-201ENST00000215071 PRDM2Q13029 1718 aa32.67■■■□□ 2.82
PSMD8-201ENST00000215071 CADPSQ9ULU8 1353 aa32.65■■■□□ 2.82
PSMD8-201ENST00000215071 WRNQ14191 1432 aaPredicted RBP eCLIP32.64■■■□□ 2.82
PSMD8-201ENST00000215071 SYNJ1O43426 1573 aa32.49■■■□□ 2.79
PSMD8-201ENST00000215071 TOP2BQ02880 1626 aa32.43■■■□□ 2.78
PSMD8-201ENST00000215071 BIVM-ERCC5R4GMW8 1640 aa32.41■■■□□ 2.78
PSMD8-201ENST00000215071 LAMC3Q9Y6N6 1575 aa32.39■■■□□ 2.78
PSMD8-201ENST00000215071 EEA1Q15075 1411 aa32.29■■■□□ 2.76
PSMD8-201ENST00000215071 CUX1P39880 1505 aa32.28■■■□□ 2.76
PSMD8-201ENST00000215071 FANCD2Q9BXW9 1451 aa32.24■■■□□ 2.75
PSMD8-201ENST00000215071 LOC105371045A0A1W2PR82 267 aa32.24■■■□□ 2.75
PSMD8-201ENST00000215071 NESP48681 1621 aa32.23■■■□□ 2.75
PSMD8-201ENST00000215071 SOGA1O94964 1423 aa32.2■■■□□ 2.75
PSMD8-201ENST00000215071 FAM9AQ8IZU1 332 aaPredicted RBP32.2■■■□□ 2.75
PSMD8-201ENST00000215071 PDS5BQ9NTI5 1447 aa32.09■■■□□ 2.73
PSMD8-201ENST00000215071 RUSC2Q8N2Y8 1516 aa32.07■■■□□ 2.72
PSMD8-201ENST00000215071 CEP164Q9UPV0 1460 aa32.03■■■□□ 2.72
PSMD8-201ENST00000215071 CSRNP3Q8WYN3 585 aa32.02■■■□□ 2.72
PSMD8-201ENST00000215071 DNMBPQ6XZF7 1577 aa32.01■■■□□ 2.71
PSMD8-201ENST00000215071 TOPBP1Q92547 1522 aa31.92■■■□□ 2.7
PSMD8-201ENST00000215071 KIF21AQ7Z4S6 1674 aa31.9■■■□□ 2.7
PSMD8-201ENST00000215071 FGD5Q6ZNL6 1462 aa31.9■■■□□ 2.7
PSMD8-201ENST00000215071 URB2Q14146 1524 aaKnown RBP31.84■■■□□ 2.69
PSMD8-201ENST00000215071 KIF21BO75037 1637 aa31.84■■■□□ 2.69
PSMD8-201ENST00000215071 KIF27Q86VH2 1401 aa31.83■■■□□ 2.69
PSMD8-201ENST00000215071 POLA1P09884 1462 aaPredicted RBP31.76■■■□□ 2.68
PSMD8-201ENST00000215071 GOLGA3Q08378 1498 aa31.76■■■□□ 2.68
PSMD8-201ENST00000215071 TNIKQ9UKE5 1360 aa31.71■■■□□ 2.67
PSMD8-201ENST00000215071 ABCA10Q8WWZ4 1543 aa31.7■■■□□ 2.66
PSMD8-201ENST00000215071 CUX2O14529 1486 aa31.67■■■□□ 2.66
PSMD8-201ENST00000215071 PRXQ9BXM0 1461 aa31.67■■■□□ 2.66
PSMD8-201ENST00000215071 MRC2Q9UBG0 1479 aa31.66■■■□□ 2.66
PSMD8-201ENST00000215071 ERICH3Q5RHP9 1530 aa31.63■■■□□ 2.65
PSMD8-201ENST00000215071 EHMT2Q96KQ7 1210 aa31.62■■■□□ 2.65
PSMD8-201ENST00000215071 RAD54L2Q9Y4B4 1467 aa31.59■■■□□ 2.65
PSMD8-201ENST00000215071 WDR97A6NE52 1622 aa31.59■■■□□ 2.65
PSMD8-201ENST00000215071 RAPGEF2Q9Y4G8 1499 aa31.56■■■□□ 2.64
PSMD8-201ENST00000215071 IGF1RP08069 1367 aa31.56■■■□□ 2.64
PSMD8-201ENST00000215071 WDR62O43379 1518 aa31.53■■■□□ 2.64
PSMD8-201ENST00000215071 UBTFP17480 764 aaKnown RBP31.51■■■□□ 2.63
PSMD8-201ENST00000215071 TARBP1Q13395 1621 aaKnown RBP31.48■■■□□ 2.63
PSMD8-201ENST00000215071 CEP162Q5TB80 1403 aa31.46■■■□□ 2.63
PSMD8-201ENST00000215071 ERCC6Q03468 1493 aa31.44■■■□□ 2.62
PSMD8-201ENST00000215071 ABCA5Q8WWZ7 1642 aa31.42■■■□□ 2.62
PSMD8-201ENST00000215071 THOC2Q8NI27 1593 aaKnown RBP31.4■■■□□ 2.62
PSMD8-201ENST00000215071 CARMIL1Q5VZK9 1371 aa31.37■■■□□ 2.61
PSMD8-201ENST00000215071 CUL7Q14999 1698 aa31.34■■■□□ 2.61
PSMD8-201ENST00000215071 IFT140Q96RY7 1462 aa31.31■■■□□ 2.6
PSMD8-201ENST00000215071 GAPVD1Q14C86 1478 aa31.31■■■□□ 2.6
PSMD8-201ENST00000215071 TDRD9Q8NDG6 1382 aaKnown RBP31.27■■■□□ 2.6
PSMD8-201ENST00000215071 CLIP1P30622 1438 aa31.23■■■□□ 2.59
PSMD8-201ENST00000215071 PBRM1Q86U86 1689 aa31.14■■■□□ 2.58
PSMD8-201ENST00000215071 AQRO60306 1485 aaKnown RBP eCLIP31.08■■■□□ 2.579e-9■■■■■ 35.9
PSMD8-201ENST00000215071 GRIN2BQ13224 1484 aa31.08■■■□□ 2.57
PSMD8-201ENST00000215071 ZNF608Q9ULD9 1512 aaPredicted RBP31.05■■■□□ 2.56
PSMD8-201ENST00000215071 FHAD1B1AJZ9 1412 aa31■■■□□ 2.55
PSMD8-201ENST00000215071 VPS8Q8N3P4 1428 aa30.99■■■□□ 2.55
PSMD8-201ENST00000215071 EIF4G3O43432 1585 aaKnown RBP30.98■■■□□ 2.55
PSMD8-201ENST00000215071 ADAMTS12P58397 1594 aa30.98■■■□□ 2.55
PSMD8-201ENST00000215071 CTTNBP2Q8WZ74 1663 aa30.97■■■□□ 2.55
PSMD8-201ENST00000215071 ARAP1Q96P48 1450 aa30.93■■■□□ 2.54
PSMD8-201ENST00000215071 ARHGAP35Q9NRY4 1499 aa30.93■■■□□ 2.54
PSMD8-201ENST00000215071 TRIM26Q12899 539 aaPredicted RBP30.91■■■□□ 2.54
PSMD8-201ENST00000215071 MAGI1Q96QZ7 1491 aaPredicted RBP30.84■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms