RNA–Protein interactions for RNA: ENST00000580621.5

KRT16P3-203, Transcript of keratin 16 pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene KRT16P3, Length 1,939 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT16P3-203ENST00000580621 NISCHQ9Y2I1 1504 aa44.15■■■■■ 4.66
KRT16P3-203ENST00000580621 CCDC180Q9P1Z9 1646 aa38.36■■■■□ 3.73
KRT16P3-203ENST00000580621 ZCCHC6Q5VYS8 1495 aaKnown RBP37.14■■■■□ 3.54
KRT16P3-203ENST00000580621 DCAF1Q9Y4B6 1507 aa36.47■■■■□ 3.43
KRT16P3-203ENST00000580621 DCAF8L2P0C7V8 631 aa36.38■■■■□ 3.41
KRT16P3-203ENST00000580621 SHROOM4Q9ULL8 1493 aa36.26■■■■□ 3.4
KRT16P3-203ENST00000580621 ABCC9O60706 1549 aa36.03■■■■□ 3.36
KRT16P3-203ENST00000580621 MYO15BQ96JP2 1530 aa35.91■■■■□ 3.34
KRT16P3-203ENST00000580621 NACADO15069 1562 aa35.64■■■■□ 3.3
KRT16P3-203ENST00000580621 SCRIBQ14160 1630 aa35.35■■■■□ 3.25
KRT16P3-203ENST00000580621 RB1CC1Q8TDY2 1594 aa35.27■■■■□ 3.24
KRT16P3-203ENST00000580621 SUPT5HO00267 1087 aaKnown RBP35.03■■■■□ 3.2
KRT16P3-203ENST00000580621 UNC13AQ9UPW8 1703 aa34.65■■■■□ 3.14
KRT16P3-203ENST00000580621 RSF1Q96T23 1441 aaPredicted RBP34.37■■■■□ 3.09
KRT16P3-203ENST00000580621 CECR2Q9BXF3 1484 aa34.31■■■■□ 3.08
KRT16P3-203ENST00000580621 BICRAQ9NZM4 1560 aa34.24■■■■□ 3.07
KRT16P3-203ENST00000580621 MROH2BQ7Z745 1585 aa34.14■■■■□ 3.06
KRT16P3-203ENST00000580621 BAZ1AQ9NRL2 1556 aaPredicted RBP34.05■■■■□ 3.04
KRT16P3-203ENST00000580621 PABPN1Q86U42 306 aaKnown RBP eCLIP34.04■■■■□ 3.04
KRT16P3-203ENST00000580621 WIZO95785 1651 aa33.9■■■■□ 3.02
KRT16P3-203ENST00000580621 SMARCA4P51532 1647 aa33.89■■■■□ 3.02
KRT16P3-203ENST00000580621 CHIC1Q5VXU3 224 aa33.67■■■□□ 2.98
KRT16P3-203ENST00000580621 TOP2AP11388 1531 aaKnown RBP33.52■■■□□ 2.96
KRT16P3-203ENST00000580621 PEG3Q9GZU2 1588 aa33.44■■■□□ 2.94
KRT16P3-203ENST00000580621 ATAD2BQ9ULI0 1458 aa33.24■■■□□ 2.91
KRT16P3-203ENST00000580621 SMARCA2P51531 1590 aa33.23■■■□□ 2.91
KRT16P3-203ENST00000580621 CCDC88BA6NC98 1476 aa33.19■■■□□ 2.9
KRT16P3-203ENST00000580621 EIF4G1Q04637 1599 aaKnown RBP33.16■■■□□ 2.9
KRT16P3-203ENST00000580621 BAZ1BQ9UIG0 1483 aaKnown RBP33.08■■■□□ 2.89
KRT16P3-203ENST00000580621 NCAPD3P42695 1498 aa32.89■■■□□ 2.86
KRT16P3-203ENST00000580621 TRIM41Q8WV44 630 aa32.89■■■□□ 2.85
KRT16P3-203ENST00000580621 HMGXB3Q12766 1538 aa32.87■■■□□ 2.85
KRT16P3-203ENST00000580621 ABCC8Q09428 1581 aa32.62■■■□□ 2.81
KRT16P3-203ENST00000580621 CC2D2AQ9P2K1 1620 aa32.62■■■□□ 2.81
KRT16P3-203ENST00000580621 LOC105371045A0A1W2PR82 267 aa32.42■■■□□ 2.78
KRT16P3-203ENST00000580621 FAM9AQ8IZU1 332 aaPredicted RBP32.33■■■□□ 2.77
KRT16P3-203ENST00000580621 WRNQ14191 1432 aaPredicted RBP eCLIP32.33■■■□□ 2.77
KRT16P3-203ENST00000580621 CFTRP13569 1480 aa32.24■■■□□ 2.75
KRT16P3-203ENST00000580621 SYNJ1O43426 1573 aa32.22■■■□□ 2.75
KRT16P3-203ENST00000580621 PRDM2Q13029 1718 aa32.15■■■□□ 2.74
KRT16P3-203ENST00000580621 CADPSQ9ULU8 1353 aa32.07■■■□□ 2.72
KRT16P3-203ENST00000580621 SOGA1O94964 1423 aa32.05■■■□□ 2.72
KRT16P3-203ENST00000580621 TOP2BQ02880 1626 aa32.05■■■□□ 2.72
KRT16P3-203ENST00000580621 BIVM-ERCC5R4GMW8 1640 aa32.02■■■□□ 2.72
KRT16P3-203ENST00000580621 EEA1Q15075 1411 aa32■■■□□ 2.71
KRT16P3-203ENST00000580621 RUSC2Q8N2Y8 1516 aa31.92■■■□□ 2.7
KRT16P3-203ENST00000580621 CUX1P39880 1505 aa31.9■■■□□ 2.7
KRT16P3-203ENST00000580621 EHMT2Q96KQ7 1210 aa31.88■■■□□ 2.69
KRT16P3-203ENST00000580621 CSRNP3Q8WYN3 585 aa31.82■■■□□ 2.68
KRT16P3-203ENST00000580621 NESP48681 1621 aa31.74■■■□□ 2.67
KRT16P3-203ENST00000580621 FANCD2Q9BXW9 1451 aa31.74■■■□□ 2.67
KRT16P3-203ENST00000580621 LAMC3Q9Y6N6 1575 aa31.73■■■□□ 2.67
KRT16P3-203ENST00000580621 DNAJC5BQ9UF47 199 aa31.72■■■□□ 2.67
KRT16P3-203ENST00000580621 KIF21BO75037 1637 aa31.61■■■□□ 2.65
KRT16P3-203ENST00000580621 GOLGA3Q08378 1498 aa31.6■■■□□ 2.65
KRT16P3-203ENST00000580621 CEP164Q9UPV0 1460 aa31.57■■■□□ 2.64
KRT16P3-203ENST00000580621 TNIKQ9UKE5 1360 aa31.56■■■□□ 2.64
KRT16P3-203ENST00000580621 DNMBPQ6XZF7 1577 aa31.51■■■□□ 2.63
KRT16P3-203ENST00000580621 FGD5Q6ZNL6 1462 aa31.5■■■□□ 2.63
KRT16P3-203ENST00000580621 KIF27Q86VH2 1401 aa31.48■■■□□ 2.63
KRT16P3-203ENST00000580621 PDS5BQ9NTI5 1447 aa31.47■■■□□ 2.63
KRT16P3-203ENST00000580621 UBTFP17480 764 aaKnown RBP31.45■■■□□ 2.63
KRT16P3-203ENST00000580621 TOPBP1Q92547 1522 aa31.44■■■□□ 2.62
KRT16P3-203ENST00000580621 CEP162Q5TB80 1403 aa31.42■■■□□ 2.62
KRT16P3-203ENST00000580621 RAPGEF2Q9Y4G8 1499 aa31.38■■■□□ 2.61
KRT16P3-203ENST00000580621 KIF21AQ7Z4S6 1674 aa31.37■■■□□ 2.61
KRT16P3-203ENST00000580621 CUX2O14529 1486 aa31.35■■■□□ 2.61
KRT16P3-203ENST00000580621 PRXQ9BXM0 1461 aa31.35■■■□□ 2.61
KRT16P3-203ENST00000580621 URB2Q14146 1524 aaKnown RBP31.34■■■□□ 2.61
KRT16P3-203ENST00000580621 ERICH3Q5RHP9 1530 aa31.33■■■□□ 2.61
KRT16P3-203ENST00000580621 POLA1P09884 1462 aaPredicted RBP31.3■■■□□ 2.6
KRT16P3-203ENST00000580621 PCGF6Q9BYE7 350 aa31.24■■■□□ 2.59
KRT16P3-203ENST00000580621 RAD54L2Q9Y4B4 1467 aa31.22■■■□□ 2.59
KRT16P3-203ENST00000580621 ABCA10Q8WWZ4 1543 aa31.22■■■□□ 2.59
KRT16P3-203ENST00000580621 IGF1RP08069 1367 aa31.18■■■□□ 2.58
KRT16P3-203ENST00000580621 TRIM26Q12899 539 aaPredicted RBP31.14■■■□□ 2.57
KRT16P3-203ENST00000580621 WDR97A6NE52 1622 aa31.12■■■□□ 2.57
KRT16P3-203ENST00000580621 CLIP1P30622 1438 aa31.11■■■□□ 2.57
KRT16P3-203ENST00000580621 MRC2Q9UBG0 1479 aa31.07■■■□□ 2.56
KRT16P3-203ENST00000580621 CARMIL1Q5VZK9 1371 aa31.03■■■□□ 2.56
KRT16P3-203ENST00000580621 ABCA5Q8WWZ7 1642 aa30.96■■■□□ 2.55
KRT16P3-203ENST00000580621 TARBP1Q13395 1621 aaKnown RBP30.95■■■□□ 2.54
KRT16P3-203ENST00000580621 CUL7Q14999 1698 aa30.93■■■□□ 2.54
KRT16P3-203ENST00000580621 WDR62O43379 1518 aa30.89■■■□□ 2.54
KRT16P3-203ENST00000580621 PPARGC1BQ86YN6 1023 aaKnown RBP30.89■■■□□ 2.54
KRT16P3-203ENST00000580621 RANGAP1P46060 587 aaPredicted RBP30.88■■■□□ 2.53
KRT16P3-203ENST00000580621 TDRD9Q8NDG6 1382 aaKnown RBP30.88■■■□□ 2.53
KRT16P3-203ENST00000580621 VPS8Q8N3P4 1428 aa30.88■■■□□ 2.53
KRT16P3-203ENST00000580621 GAPVD1Q14C86 1478 aa30.85■■■□□ 2.53
KRT16P3-203ENST00000580621 ERCC6Q03468 1493 aa30.85■■■□□ 2.53
KRT16P3-203ENST00000580621 ARAP1Q96P48 1450 aa30.78■■■□□ 2.52
KRT16P3-203ENST00000580621 THOC2Q8NI27 1593 aaKnown RBP30.75■■■□□ 2.51
KRT16P3-203ENST00000580621 IFT140Q96RY7 1462 aa30.73■■■□□ 2.51
KRT16P3-203ENST00000580621 ARHGAP35Q9NRY4 1499 aa30.72■■■□□ 2.51
KRT16P3-203ENST00000580621 PBRM1Q86U86 1689 aa30.7■■■□□ 2.51
KRT16P3-203ENST00000580621 CTTNBP2Q8WZ74 1663 aa30.65■■■□□ 2.5
KRT16P3-203ENST00000580621 AQRO60306 1485 aaKnown RBP eCLIP30.64■■■□□ 2.49
KRT16P3-203ENST00000580621 TTBK1Q5TCY1 1321 aaPredicted RBP30.59■■■□□ 2.49
KRT16P3-203ENST00000580621 ZNF608Q9ULD9 1512 aaPredicted RBP30.58■■■□□ 2.49
KRT16P3-203ENST00000580621 HRCP23327 699 aa30.57■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms