RNA–Protein interactions for RNA: ENST00000351959.9

TNFRSF25-203, Transcript of TNF receptor superfamily member 25, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF25, Length 1,441 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-203ENST00000351959 NISCHQ9Y2I1 1504 aa47.26■■■■■ 5.16
TNFRSF25-203ENST00000351959 CCDC180Q9P1Z9 1646 aa41.62■■■■■ 4.25
TNFRSF25-203ENST00000351959 ABCC9O60706 1549 aa40.13■■■■■ 4.01
TNFRSF25-203ENST00000351959 ZCCHC6Q5VYS8 1495 aaKnown RBP39.5■■■■□ 3.91
TNFRSF25-203ENST00000351959 DCAF8L2P0C7V8 631 aa39.33■■■■□ 3.89
TNFRSF25-203ENST00000351959 DCAF1Q9Y4B6 1507 aa39.14■■■■□ 3.86
TNFRSF25-203ENST00000351959 MYO15BQ96JP2 1530 aa39.05■■■■□ 3.84
TNFRSF25-203ENST00000351959 NACADO15069 1562 aa39.03■■■■□ 3.84
TNFRSF25-203ENST00000351959 RB1CC1Q8TDY2 1594 aa38.89■■■■□ 3.82
TNFRSF25-203ENST00000351959 SCRIBQ14160 1630 aa38.05■■■■□ 3.68
TNFRSF25-203ENST00000351959 UNC13AQ9UPW8 1703 aa37.89■■■■□ 3.66
TNFRSF25-203ENST00000351959 SHROOM4Q9ULL8 1493 aa37.8■■■■□ 3.64
TNFRSF25-203ENST00000351959 PABPN1Q86U42 306 aaKnown RBP eCLIP37.69■■■■□ 3.62
TNFRSF25-203ENST00000351959 BICRAQ9NZM4 1560 aa37.66■■■■□ 3.62
TNFRSF25-203ENST00000351959 CECR2Q9BXF3 1484 aa36.75■■■■□ 3.47
TNFRSF25-203ENST00000351959 EIF4G1Q04637 1599 aaKnown RBP36.63■■■■□ 3.45
TNFRSF25-203ENST00000351959 BAZ1AQ9NRL2 1556 aaPredicted RBP36.58■■■■□ 3.45
TNFRSF25-203ENST00000351959 SMARCA4P51532 1647 aa36.48■■■■□ 3.43
TNFRSF25-203ENST00000351959 MROH2BQ7Z745 1585 aa36.43■■■■□ 3.42
TNFRSF25-203ENST00000351959 RSF1Q96T23 1441 aaPredicted RBP36.31■■■■□ 3.4
TNFRSF25-203ENST00000351959 CC2D2AQ9P2K1 1620 aa36.29■■■■□ 3.4
TNFRSF25-203ENST00000351959 DNAJC5BQ9UF47 199 aa36.25■■■■□ 3.39
TNFRSF25-203ENST00000351959 ATAD2BQ9ULI0 1458 aa36.16■■■■□ 3.38
TNFRSF25-203ENST00000351959 SMARCA2P51531 1590 aa36.13■■■■□ 3.37
TNFRSF25-203ENST00000351959 PEG3Q9GZU2 1588 aa36.12■■■■□ 3.37
TNFRSF25-203ENST00000351959 NCAPD3P42695 1498 aa36.06■■■■□ 3.36
TNFRSF25-203ENST00000351959 WIZO95785 1651 aa36.04■■■■□ 3.36
TNFRSF25-203ENST00000351959 SUPT5HO00267 1087 aaKnown RBP36■■■■□ 3.35
TNFRSF25-203ENST00000351959 BAZ1BQ9UIG0 1483 aaKnown RBP35.89■■■■□ 3.34
TNFRSF25-203ENST00000351959 HMGXB3Q12766 1538 aa35.88■■■■□ 3.33
TNFRSF25-203ENST00000351959 TOP2AP11388 1531 aaKnown RBP35.71■■■■□ 3.31
TNFRSF25-203ENST00000351959 CCDC88BA6NC98 1476 aa35.34■■■■□ 3.25
TNFRSF25-203ENST00000351959 CADPSQ9ULU8 1353 aa35.07■■■■□ 3.2
TNFRSF25-203ENST00000351959 CFTRP13569 1480 aa34.97■■■■□ 3.19
TNFRSF25-203ENST00000351959 LAMC3Q9Y6N6 1575 aa34.93■■■■□ 3.18
TNFRSF25-203ENST00000351959 NESP48681 1621 aa34.93■■■■□ 3.18
TNFRSF25-203ENST00000351959 PDS5BQ9NTI5 1447 aa34.74■■■■□ 3.15
TNFRSF25-203ENST00000351959 FANCD2Q9BXW9 1451 aa34.62■■■■□ 3.13
TNFRSF25-203ENST00000351959 PRDM2Q13029 1718 aa34.6■■■■□ 3.13
TNFRSF25-203ENST00000351959 ERCC6Q03468 1493 aa34.54■■■■□ 3.12
TNFRSF25-203ENST00000351959 CEP164Q9UPV0 1460 aa34.49■■■■□ 3.11
TNFRSF25-203ENST00000351959 KIF21AQ7Z4S6 1674 aa34.44■■■■□ 3.1
TNFRSF25-203ENST00000351959 MRC2Q9UBG0 1479 aa34.29■■■■□ 3.08
TNFRSF25-203ENST00000351959 WRNQ14191 1432 aaPredicted RBP eCLIP34.22■■■■□ 3.07
TNFRSF25-203ENST00000351959 ABCC8Q09428 1581 aa34.22■■■■□ 3.07
TNFRSF25-203ENST00000351959 URB2Q14146 1524 aaKnown RBP34.2■■■■□ 3.07
TNFRSF25-203ENST00000351959 THOC2Q8NI27 1593 aaKnown RBP34.17■■■■□ 3.06
TNFRSF25-203ENST00000351959 WDR62O43379 1518 aa34.13■■■■□ 3.05
TNFRSF25-203ENST00000351959 TOPBP1Q92547 1522 aa34.13■■■■□ 3.05
TNFRSF25-203ENST00000351959 DNMBPQ6XZF7 1577 aa34.12■■■■□ 3.05
TNFRSF25-203ENST00000351959 CUX1P39880 1505 aa34.12■■■■□ 3.05
TNFRSF25-203ENST00000351959 CHIC1Q5VXU3 224 aa34.03■■■■□ 3.04
TNFRSF25-203ENST00000351959 SYNJ1O43426 1573 aa34.02■■■■□ 3.04
TNFRSF25-203ENST00000351959 TOP2BQ02880 1626 aa34.01■■■■□ 3.04
TNFRSF25-203ENST00000351959 TRIM41Q8WV44 630 aa33.98■■■■□ 3.03
TNFRSF25-203ENST00000351959 BIVM-ERCC5R4GMW8 1640 aa33.96■■■■□ 3.03
TNFRSF25-203ENST00000351959 CUX2O14529 1486 aa33.91■■■■□ 3.02
TNFRSF25-203ENST00000351959 FGD5Q6ZNL6 1462 aa33.91■■■■□ 3.02
TNFRSF25-203ENST00000351959 POLA1P09884 1462 aaPredicted RBP33.89■■■■□ 3.02
TNFRSF25-203ENST00000351959 SOGA1O94964 1423 aa33.82■■■■□ 3.01
TNFRSF25-203ENST00000351959 IFT140Q96RY7 1462 aa33.76■■■□□ 2.99
TNFRSF25-203ENST00000351959 RAD54L2Q9Y4B4 1467 aa33.74■■■□□ 2.99
TNFRSF25-203ENST00000351959 TARBP1Q13395 1621 aaKnown RBP33.66■■■□□ 2.98
TNFRSF25-203ENST00000351959 ABCA10Q8WWZ4 1543 aa33.63■■■□□ 2.97
TNFRSF25-203ENST00000351959 TDRD9Q8NDG6 1382 aaKnown RBP33.54■■■□□ 2.96
TNFRSF25-203ENST00000351959 ZNF608Q9ULD9 1512 aaPredicted RBP33.52■■■□□ 2.96
TNFRSF25-203ENST00000351959 WDR97A6NE52 1622 aa33.49■■■□□ 2.95
TNFRSF25-203ENST00000351959 AQRO60306 1485 aaKnown RBP eCLIP33.47■■■□□ 2.95
TNFRSF25-203ENST00000351959 KIF27Q86VH2 1401 aa33.46■■■□□ 2.95
TNFRSF25-203ENST00000351959 GAPVD1Q14C86 1478 aa33.41■■■□□ 2.94
TNFRSF25-203ENST00000351959 EIF4G3O43432 1585 aaKnown RBP33.36■■■□□ 2.93
TNFRSF25-203ENST00000351959 ABCA5Q8WWZ7 1642 aa33.36■■■□□ 2.93
TNFRSF25-203ENST00000351959 RUSC2Q8N2Y8 1516 aa33.35■■■□□ 2.93
TNFRSF25-203ENST00000351959 GRIN2BQ13224 1484 aa33.3■■■□□ 2.92
TNFRSF25-203ENST00000351959 EEA1Q15075 1411 aa33.3■■■□□ 2.92
TNFRSF25-203ENST00000351959 IGF1RP08069 1367 aa33.27■■■□□ 2.92
TNFRSF25-203ENST00000351959 FAM9AQ8IZU1 332 aaPredicted RBP33.24■■■□□ 2.91
TNFRSF25-203ENST00000351959 ERICH3Q5RHP9 1530 aa33.23■■■□□ 2.91
TNFRSF25-203ENST00000351959 CSRNP3Q8WYN3 585 aa33.22■■■□□ 2.91
TNFRSF25-203ENST00000351959 PBRM1Q86U86 1689 aa33.17■■■□□ 2.9
TNFRSF25-203ENST00000351959 SNAPC4Q5SXM2 1469 aa33.13■■■□□ 2.89
TNFRSF25-203ENST00000351959 MAGI1Q96QZ7 1491 aaPredicted RBP33.13■■■□□ 2.89
TNFRSF25-203ENST00000351959 CARMIL1Q5VZK9 1371 aa33.08■■■□□ 2.89
TNFRSF25-203ENST00000351959 FHAD1B1AJZ9 1412 aa33.06■■■□□ 2.88
TNFRSF25-203ENST00000351959 CUL7Q14999 1698 aa33.02■■■□□ 2.88
TNFRSF25-203ENST00000351959 CHMP7Q8WUX9 453 aaPredicted RBP33.02■■■□□ 2.88
TNFRSF25-203ENST00000351959 SYNJ2O15056 1496 aa33■■■□□ 2.87
TNFRSF25-203ENST00000351959 ADAMTS12P58397 1594 aa32.99■■■□□ 2.87
TNFRSF25-203ENST00000351959 PRXQ9BXM0 1461 aa32.99■■■□□ 2.87
TNFRSF25-203ENST00000351959 FBLN2P98095 1184 aa32.98■■■□□ 2.87
TNFRSF25-203ENST00000351959 RAPGEF2Q9Y4G8 1499 aa32.93■■■□□ 2.86
TNFRSF25-203ENST00000351959 GRIN2AQ12879 1464 aa32.86■■■□□ 2.85
TNFRSF25-203ENST00000351959 KIF21BO75037 1637 aa32.82■■■□□ 2.84
TNFRSF25-203ENST00000351959 CHD1O14646 1710 aa32.78■■■□□ 2.84
TNFRSF25-203ENST00000351959 OSCARQ8IYS5 282 aa32.75■■■□□ 2.83
TNFRSF25-203ENST00000351959 GOLGA3Q08378 1498 aa32.74■■■□□ 2.83
TNFRSF25-203ENST00000351959 EHMT2Q96KQ7 1210 aa32.73■■■□□ 2.83
TNFRSF25-203ENST00000351959 NUP160Q12769 1436 aa32.69■■■□□ 2.82
TNFRSF25-203ENST00000351959 UBTFP17480 764 aaKnown RBP32.68■■■□□ 2.82
TNFRSF25-203ENST00000351959 LOC105371045A0A1W2PR82 267 aa32.63■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms