RNA–Protein interactions for RNA: ENST00000411694.1

LINC01678-201, Transcript of long intergenic non-protein coding RNA 1678, humanhuman

TSL 5 BASIC

Gene LINC01678, Length 863 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01678-201ENST00000411694 NISCHQ9Y2I1 1504 aa54.04■■■■■ 6.24
LINC01678-201ENST00000411694 ABCC9O60706 1549 aa48.64■■■■■ 5.38
LINC01678-201ENST00000411694 CCDC180Q9P1Z9 1646 aa48.48■■■■■ 5.35
LINC01678-201ENST00000411694 RB1CC1Q8TDY2 1594 aa46.21■■■■■ 4.99
LINC01678-201ENST00000411694 NACADO15069 1562 aa45.88■■■■■ 4.94
LINC01678-201ENST00000411694 DNAJC5BQ9UF47 199 aa45.77■■■■■ 4.92
LINC01678-201ENST00000411694 DCAF8L2P0C7V8 631 aa45.68■■■■■ 4.9
LINC01678-201ENST00000411694 PABPN1Q86U42 306 aaKnown RBP eCLIP45.3■■■■■ 4.84
LINC01678-201ENST00000411694 MYO15BQ96JP2 1530 aa45.22■■■■■ 4.83
LINC01678-201ENST00000411694 UNC13AQ9UPW8 1703 aa45.15■■■■■ 4.82
LINC01678-201ENST00000411694 BICRAQ9NZM4 1560 aa44.91■■■■■ 4.78
LINC01678-201ENST00000411694 ZCCHC6Q5VYS8 1495 aaKnown RBP44.78■■■■■ 4.76
LINC01678-201ENST00000411694 DCAF1Q9Y4B6 1507 aa44.61■■■■■ 4.73
LINC01678-201ENST00000411694 SHROOM4Q9ULL8 1493 aa44.25■■■■■ 4.67
LINC01678-201ENST00000411694 SCRIBQ14160 1630 aa44.21■■■■■ 4.67
LINC01678-201ENST00000411694 CC2D2AQ9P2K1 1620 aa43.91■■■■■ 4.62
LINC01678-201ENST00000411694 CECR2Q9BXF3 1484 aa43.82■■■■■ 4.6
LINC01678-201ENST00000411694 EIF4G1Q04637 1599 aaKnown RBP43.8■■■■■ 4.6
LINC01678-201ENST00000411694 NCAPD3P42695 1498 aa42.39■■■■■ 4.38
LINC01678-201ENST00000411694 ATAD2BQ9ULI0 1458 aa42.25■■■■■ 4.35
LINC01678-201ENST00000411694 SMARCA4P51532 1647 aa42.16■■■■■ 4.34
LINC01678-201ENST00000411694 SMARCA2P51531 1590 aa42.1■■■■■ 4.33
LINC01678-201ENST00000411694 DNAJC5Q9H3Z4 198 aa42.05■■■■■ 4.32
LINC01678-201ENST00000411694 HMGXB3Q12766 1538 aa42.04■■■■■ 4.32
LINC01678-201ENST00000411694 ERCC6Q03468 1493 aa41.97■■■■■ 4.31
LINC01678-201ENST00000411694 BAZ1AQ9NRL2 1556 aaPredicted RBP41.93■■■■■ 4.3
LINC01678-201ENST00000411694 CUX2O14529 1486 aa41.92■■■■■ 4.3
LINC01678-201ENST00000411694 BAZ1BQ9UIG0 1483 aaKnown RBP41.81■■■■■ 4.28
LINC01678-201ENST00000411694 NESP48681 1621 aa41.77■■■■■ 4.28
LINC01678-201ENST00000411694 PEG3Q9GZU2 1588 aa41.76■■■■■ 4.27
LINC01678-201ENST00000411694 MROH2BQ7Z745 1585 aa41.66■■■■■ 4.26
LINC01678-201ENST00000411694 LAMC3Q9Y6N6 1575 aa41.41■■■■■ 4.22
LINC01678-201ENST00000411694 THOC2Q8NI27 1593 aaKnown RBP41.33■■■■■ 4.21
LINC01678-201ENST00000411694 PDS5BQ9NTI5 1447 aa41.19■■■■■ 4.18
LINC01678-201ENST00000411694 KIF21AQ7Z4S6 1674 aa41.17■■■■■ 4.18
LINC01678-201ENST00000411694 WIZO95785 1651 aa41.13■■■■■ 4.18
LINC01678-201ENST00000411694 CADPSQ9ULU8 1353 aa41.1■■■■■ 4.17
LINC01678-201ENST00000411694 MRC2Q9UBG0 1479 aa40.85■■■■■ 4.13
LINC01678-201ENST00000411694 RSF1Q96T23 1441 aaPredicted RBP40.76■■■■■ 4.12
LINC01678-201ENST00000411694 WDR62O43379 1518 aa40.74■■■■■ 4.11
LINC01678-201ENST00000411694 CEP164Q9UPV0 1460 aa40.67■■■■■ 4.1
LINC01678-201ENST00000411694 FANCD2Q9BXW9 1451 aa40.63■■■■■ 4.09
LINC01678-201ENST00000411694 CFTRP13569 1480 aa40.61■■■■■ 4.09
LINC01678-201ENST00000411694 TOP2AP11388 1531 aaKnown RBP40.61■■■■■ 4.09
LINC01678-201ENST00000411694 URB2Q14146 1524 aaKnown RBP40.32■■■■■ 4.04
LINC01678-201ENST00000411694 CCDC88BA6NC98 1476 aa40.18■■■■■ 4.02
LINC01678-201ENST00000411694 TRIM41Q8WV44 630 aa40.17■■■■■ 4.02
LINC01678-201ENST00000411694 PRDM2Q13029 1718 aa40.11■■■■■ 4.01
LINC01678-201ENST00000411694 OSCARQ8IYS5 282 aa40.03■■■■■ 4
LINC01678-201ENST00000411694 IFT140Q96RY7 1462 aa39.87■■■■□ 3.97
LINC01678-201ENST00000411694 TOPBP1Q92547 1522 aa39.85■■■■□ 3.97
LINC01678-201ENST00000411694 ZNF608Q9ULD9 1512 aaPredicted RBP39.84■■■■□ 3.97
LINC01678-201ENST00000411694 ABCC8Q09428 1581 aa39.72■■■■□ 3.95
LINC01678-201ENST00000411694 DNMBPQ6XZF7 1577 aa39.67■■■■□ 3.94
LINC01678-201ENST00000411694 EIF4G3O43432 1585 aaKnown RBP39.57■■■■□ 3.92
LINC01678-201ENST00000411694 RIMBP3CA6NJZ7 1639 aa39.5■■■■□ 3.91
LINC01678-201ENST00000411694 RIMBP3BA6NNM3 1639 aa39.5■■■■□ 3.91
LINC01678-201ENST00000411694 RIMBP3Q9UFD9 1639 aa39.5■■■■□ 3.91
LINC01678-201ENST00000411694 TARBP1Q13395 1621 aaKnown RBP39.49■■■■□ 3.91
LINC01678-201ENST00000411694 AQRO60306 1485 aaKnown RBP eCLIP39.47■■■■□ 3.91
LINC01678-201ENST00000411694 POLA1P09884 1462 aaPredicted RBP39.44■■■■□ 3.9
LINC01678-201ENST00000411694 ARHGEF11O15085 1522 aa39.37■■■■□ 3.89
LINC01678-201ENST00000411694 RAD54L2Q9Y4B4 1467 aa39.32■■■■□ 3.89
LINC01678-201ENST00000411694 CHD1O14646 1710 aa39.28■■■■□ 3.88
LINC01678-201ENST00000411694 SOGA1O94964 1423 aa39.26■■■■□ 3.88
LINC01678-201ENST00000411694 TDRD9Q8NDG6 1382 aaKnown RBP39.21■■■■□ 3.87
LINC01678-201ENST00000411694 FBLN2P98095 1184 aa39.21■■■■□ 3.87
LINC01678-201ENST00000411694 FGD5Q6ZNL6 1462 aa39.18■■■■□ 3.86
LINC01678-201ENST00000411694 CUX1P39880 1505 aa39.14■■■■□ 3.86
LINC01678-201ENST00000411694 CYB5RLQ6IPT4 315 aa39.11■■■■□ 3.85
LINC01678-201ENST00000411694 SNAPC4Q5SXM2 1469 aa39.05■■■■□ 3.84
LINC01678-201ENST00000411694 WDR97A6NE52 1622 aa39.04■■■■□ 3.84
LINC01678-201ENST00000411694 ARAP1Q96P48 1450 aa39■■■■□ 3.83
LINC01678-201ENST00000411694 GRIN2BQ13224 1484 aa38.92■■■■□ 3.82
LINC01678-201ENST00000411694 MAGI1Q96QZ7 1491 aaPredicted RBP38.92■■■■□ 3.82
LINC01678-201ENST00000411694 SUPT5HO00267 1087 aaKnown RBP38.91■■■■□ 3.82
LINC01678-201ENST00000411694 CHMP7Q8WUX9 453 aaPredicted RBP38.91■■■■□ 3.82
LINC01678-201ENST00000411694 CLASP1Q7Z460 1538 aa38.86■■■■□ 3.81
LINC01678-201ENST00000411694 SYNJ1O43426 1573 aa38.8■■■■□ 3.8
LINC01678-201ENST00000411694 SYNJ2O15056 1496 aa38.79■■■■□ 3.8
LINC01678-201ENST00000411694 GAPVD1Q14C86 1478 aa38.77■■■■□ 3.8
LINC01678-201ENST00000411694 ABCA10Q8WWZ4 1543 aa38.73■■■■□ 3.79
LINC01678-201ENST00000411694 PBRM1Q86U86 1689 aa38.72■■■■□ 3.79
LINC01678-201ENST00000411694 TRHP20396 242 aaPredicted RBP38.69■■■■□ 3.78
LINC01678-201ENST00000411694 ABCA5Q8WWZ7 1642 aa38.66■■■■□ 3.78
LINC01678-201ENST00000411694 WRNQ14191 1432 aaPredicted RBP eCLIP38.55■■■■□ 3.76
LINC01678-201ENST00000411694 TOP2BQ02880 1626 aa38.45■■■■□ 3.75
LINC01678-201ENST00000411694 BIVM-ERCC5R4GMW8 1640 aa38.45■■■■□ 3.75
LINC01678-201ENST00000411694 GRIN2AQ12879 1464 aa38.42■■■■□ 3.74
LINC01678-201ENST00000411694 ADAMTS12P58397 1594 aa38.37■■■■□ 3.73
LINC01678-201ENST00000411694 NUP160Q12769 1436 aa38.31■■■■□ 3.72
LINC01678-201ENST00000411694 CEP170Q5SW79 1584 aa38.29■■■■□ 3.72
LINC01678-201ENST00000411694 FHAD1B1AJZ9 1412 aa38.29■■■■□ 3.72
LINC01678-201ENST00000411694 ERCC6L2Q5T890 1561 aa38.27■■■■□ 3.72
LINC01678-201ENST00000411694 ERICH3Q5RHP9 1530 aa38.22■■■■□ 3.71
LINC01678-201ENST00000411694 SHROOM2Q13796 1616 aa38.12■■■■□ 3.69
LINC01678-201ENST00000411694 PRG4Q92954 1404 aaPredicted RBP37.95■■■■□ 3.67
LINC01678-201ENST00000411694 JPH4Q96JJ6 628 aa37.93■■■■□ 3.66
LINC01678-201ENST00000411694 RUSC2Q8N2Y8 1516 aa37.83■■■■□ 3.65
LINC01678-201ENST00000411694 IGF1RP08069 1367 aa37.76■■■■□ 3.64
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms