RNA–Protein interactions for RNA: ENST00000290846.8

TRMU-201, Transcript of tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRMU, Length 1,940 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMU-201ENST00000290846 NISCHQ9Y2I1 1504 aa43.6■■■■■ 4.57
TRMU-201ENST00000290846 CCDC180Q9P1Z9 1646 aa38.11■■■■□ 3.69
TRMU-201ENST00000290846 ABCC9O60706 1549 aa36.54■■■■□ 3.44
TRMU-201ENST00000290846 ZCCHC6Q5VYS8 1495 aaKnown RBP36.53■■■■□ 3.44
TRMU-201ENST00000290846 DCAF8L2P0C7V8 631 aa36.42■■■■□ 3.42
TRMU-201ENST00000290846 DCAF1Q9Y4B6 1507 aa35.93■■■■□ 3.34
TRMU-201ENST00000290846 SHROOM4Q9ULL8 1493 aa35.8■■■■□ 3.32
TRMU-201ENST00000290846 MYO15BQ96JP2 1530 aa35.6■■■■□ 3.29
TRMU-201ENST00000290846 NACADO15069 1562 aa35.6■■■■□ 3.29
TRMU-201ENST00000290846 RB1CC1Q8TDY2 1594 aa35.42■■■■□ 3.26
TRMU-201ENST00000290846 SCRIBQ14160 1630 aa35.17■■■■□ 3.22
TRMU-201ENST00000290846 UNC13AQ9UPW8 1703 aa34.75■■■■□ 3.15
TRMU-201ENST00000290846 SUPT5HO00267 1087 aaKnown RBP34.75■■■■□ 3.15
TRMU-201ENST00000290846 PABPN1Q86U42 306 aaKnown RBP eCLIP34.45■■■■□ 3.11
TRMU-201ENST00000290846 BICRAQ9NZM4 1560 aa34.35■■■■□ 3.09
TRMU-201ENST00000290846 CECR2Q9BXF3 1484 aa33.99■■■■□ 3.03
TRMU-201ENST00000290846 RSF1Q96T23 1441 aaPredicted RBP33.83■■■■□ 3.01
TRMU-201ENST00000290846 MROH2BQ7Z745 1585 aa33.73■■■□□ 2.99
TRMU-201ENST00000290846 BAZ1AQ9NRL2 1556 aaPredicted RBP33.69■■■□□ 2.98
TRMU-201ENST00000290846 SMARCA4P51532 1647 aa33.6■■■□□ 2.97
TRMU-201ENST00000290846 CHIC1Q5VXU3 224 aa33.57■■■□□ 2.97
TRMU-201ENST00000290846 WIZO95785 1651 aa33.47■■■□□ 2.95
TRMU-201ENST00000290846 EIF4G1Q04637 1599 aaKnown RBP33.37■■■□□ 2.93
TRMU-201ENST00000290846 ATAD2BQ9ULI0 1458 aa33.14■■■□□ 2.9
TRMU-201ENST00000290846 PEG3Q9GZU2 1588 aa33.11■■■□□ 2.89
TRMU-201ENST00000290846 SMARCA2P51531 1590 aa33.08■■■□□ 2.89
TRMU-201ENST00000290846 TOP2AP11388 1531 aaKnown RBP33.02■■■□□ 2.88
TRMU-201ENST00000290846 CC2D2AQ9P2K1 1620 aa33■■■□□ 2.87
TRMU-201ENST00000290846 BAZ1BQ9UIG0 1483 aaKnown RBP32.97■■■□□ 2.87
TRMU-201ENST00000290846 NCAPD3P42695 1498 aa32.86■■■□□ 2.85
TRMU-201ENST00000290846 HMGXB3Q12766 1538 aa32.77■■■□□ 2.84
TRMU-201ENST00000290846 CCDC88BA6NC98 1476 aa32.73■■■□□ 2.83
TRMU-201ENST00000290846 TRIM41Q8WV44 630 aa32.6■■■□□ 2.81
TRMU-201ENST00000290846 DNAJC5BQ9UF47 199 aa32.55■■■□□ 2.8
TRMU-201ENST00000290846 LOC105371045A0A1W2PR82 267 aa32.36■■■□□ 2.77
TRMU-201ENST00000290846 ABCC8Q09428 1581 aa32.08■■■□□ 2.73
TRMU-201ENST00000290846 FAM9AQ8IZU1 332 aaPredicted RBP32.07■■■□□ 2.72
TRMU-201ENST00000290846 CFTRP13569 1480 aa32.06■■■□□ 2.72
TRMU-201ENST00000290846 CADPSQ9ULU8 1353 aa32.05■■■□□ 2.72
TRMU-201ENST00000290846 NESP48681 1621 aa31.97■■■□□ 2.71
TRMU-201ENST00000290846 PRDM2Q13029 1718 aa31.88■■■□□ 2.69
TRMU-201ENST00000290846 LAMC3Q9Y6N6 1575 aa31.82■■■□□ 2.68
TRMU-201ENST00000290846 WRNQ14191 1432 aaPredicted RBP eCLIP31.8■■■□□ 2.68
TRMU-201ENST00000290846 FANCD2Q9BXW9 1451 aa31.72■■■□□ 2.67
TRMU-201ENST00000290846 SYNJ1O43426 1573 aa31.66■■■□□ 2.66
TRMU-201ENST00000290846 SOGA1O94964 1423 aa31.64■■■□□ 2.66
TRMU-201ENST00000290846 EHMT2Q96KQ7 1210 aa31.62■■■□□ 2.65
TRMU-201ENST00000290846 EEA1Q15075 1411 aa31.62■■■□□ 2.65
TRMU-201ENST00000290846 PDS5BQ9NTI5 1447 aa31.62■■■□□ 2.65
TRMU-201ENST00000290846 CEP164Q9UPV0 1460 aa31.55■■■□□ 2.64
TRMU-201ENST00000290846 KIF21AQ7Z4S6 1674 aa31.55■■■□□ 2.64
TRMU-201ENST00000290846 CUX1P39880 1505 aa31.54■■■□□ 2.64
TRMU-201ENST00000290846 TOP2BQ02880 1626 aa31.51■■■□□ 2.63
TRMU-201ENST00000290846 RUSC2Q8N2Y8 1516 aa31.5■■■□□ 2.63
TRMU-201ENST00000290846 CSRNP3Q8WYN3 585 aa31.48■■■□□ 2.63
TRMU-201ENST00000290846 BIVM-ERCC5R4GMW8 1640 aa31.47■■■□□ 2.63
TRMU-201ENST00000290846 PCGF6Q9BYE7 350 aa31.46■■■□□ 2.63
TRMU-201ENST00000290846 ERCC6Q03468 1493 aa31.36■■■□□ 2.61
TRMU-201ENST00000290846 URB2Q14146 1524 aaKnown RBP31.34■■■□□ 2.61
TRMU-201ENST00000290846 DNMBPQ6XZF7 1577 aa31.33■■■□□ 2.61
TRMU-201ENST00000290846 TOPBP1Q92547 1522 aa31.33■■■□□ 2.61
TRMU-201ENST00000290846 TRIM26Q12899 539 aaPredicted RBP31.28■■■□□ 2.6
TRMU-201ENST00000290846 TNIKQ9UKE5 1360 aa31.27■■■□□ 2.6
TRMU-201ENST00000290846 FGD5Q6ZNL6 1462 aa31.27■■■□□ 2.6
TRMU-201ENST00000290846 MRC2Q9UBG0 1479 aa31.23■■■□□ 2.59
TRMU-201ENST00000290846 GOLGA3Q08378 1498 aa31.22■■■□□ 2.59
TRMU-201ENST00000290846 KIF21BO75037 1637 aa31.15■■■□□ 2.58
TRMU-201ENST00000290846 POLA1P09884 1462 aaPredicted RBP31.15■■■□□ 2.58
TRMU-201ENST00000290846 UBTFP17480 764 aaKnown RBP31.14■■■□□ 2.57
TRMU-201ENST00000290846 CEP162Q5TB80 1403 aa31.14■■■□□ 2.57
TRMU-201ENST00000290846 RAD54L2Q9Y4B4 1467 aa31.11■■■□□ 2.57
TRMU-201ENST00000290846 THOC2Q8NI27 1593 aaKnown RBP31.05■■■□□ 2.56
TRMU-201ENST00000290846 WDR62O43379 1518 aa31.04■■■□□ 2.56
TRMU-201ENST00000290846 CUX2O14529 1486 aa31.03■■■□□ 2.56
TRMU-201ENST00000290846 HRCP23327 699 aa31.01■■■□□ 2.55
TRMU-201ENST00000290846 KIF27Q86VH2 1401 aa30.99■■■□□ 2.55
TRMU-201ENST00000290846 RAPGEF2Q9Y4G8 1499 aa30.95■■■□□ 2.54
TRMU-201ENST00000290846 ABCA10Q8WWZ4 1543 aa30.92■■■□□ 2.54
TRMU-201ENST00000290846 PRXQ9BXM0 1461 aa30.88■■■□□ 2.53
TRMU-201ENST00000290846 TARBP1Q13395 1621 aaKnown RBP30.86■■■□□ 2.53
TRMU-201ENST00000290846 TDRD9Q8NDG6 1382 aaKnown RBP30.86■■■□□ 2.53
TRMU-201ENST00000290846 WDR97A6NE52 1622 aa30.85■■■□□ 2.53
TRMU-201ENST00000290846 ERICH3Q5RHP9 1530 aa30.84■■■□□ 2.53
TRMU-201ENST00000290846 PPARGC1BQ86YN6 1023 aaKnown RBP30.79■■■□□ 2.52
TRMU-201ENST00000290846 IFT140Q96RY7 1462 aa30.78■■■□□ 2.52
TRMU-201ENST00000290846 CLIP1P30622 1438 aa30.77■■■□□ 2.52
TRMU-201ENST00000290846 IGF1RP08069 1367 aa30.75■■■□□ 2.51
TRMU-201ENST00000290846 GAPVD1Q14C86 1478 aa30.72■■■□□ 2.51
TRMU-201ENST00000290846 AQRO60306 1485 aaKnown RBP eCLIP30.71■■■□□ 2.514e-7■■■■□ 21
TRMU-201ENST00000290846 ZNF608Q9ULD9 1512 aaPredicted RBP30.71■■■□□ 2.51
TRMU-201ENST00000290846 ABCA5Q8WWZ7 1642 aa30.7■■■□□ 2.51
TRMU-201ENST00000290846 CARMIL1Q5VZK9 1371 aa30.62■■■□□ 2.49
TRMU-201ENST00000290846 PBRM1Q86U86 1689 aa30.57■■■□□ 2.48
TRMU-201ENST00000290846 VPS8Q8N3P4 1428 aa30.57■■■□□ 2.48
TRMU-201ENST00000290846 EIF4G3O43432 1585 aaKnown RBP30.56■■■□□ 2.48
TRMU-201ENST00000290846 CUL7Q14999 1698 aa30.5■■■□□ 2.47
TRMU-201ENST00000290846 GRIN2BQ13224 1484 aa30.5■■■□□ 2.47
TRMU-201ENST00000290846 RANGAP1P46060 587 aaPredicted RBP30.49■■■□□ 2.47
TRMU-201ENST00000290846 TTBK1Q5TCY1 1321 aaPredicted RBP30.39■■■□□ 2.46
TRMU-201ENST00000290846 SNAPC4Q5SXM2 1469 aa30.38■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 268.3 ms