RNA–Protein interactions for RNA: ENST00000554054.5

SKOR1-203, Transcript of SKI family transcriptional corepressor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SKOR1, Length 3,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKOR1-203ENST00000554054 NISCHQ9Y2I1 1504 aa33.9■■■■□ 3.02
SKOR1-203ENST00000554054 DCAF8L2P0C7V8 631 aa30.83■■■□□ 2.53
SKOR1-203ENST00000554054 SHROOM4Q9ULL8 1493 aa30.51■■■□□ 2.47
SKOR1-203ENST00000554054 SUPT5HO00267 1087 aaKnown RBP30.33■■■□□ 2.45
SKOR1-203ENST00000554054 PCGF6Q9BYE7 350 aa30.07■■■□□ 2.4
SKOR1-203ENST00000554054 PPARGC1BQ86YN6 1023 aaKnown RBP30■■■□□ 2.39
SKOR1-203ENST00000554054 HRCP23327 699 aa29.78■■■□□ 2.36
SKOR1-203ENST00000554054 EHMT2Q96KQ7 1210 aa29.05■■■□□ 2.24
SKOR1-203ENST00000554054 PELP1Q8IZL8 1130 aaKnown RBP28.87■■■□□ 2.21
SKOR1-203ENST00000554054 LOC105371045A0A1W2PR82 267 aa28.8■■■□□ 2.2
SKOR1-203ENST00000554054 CHIC1Q5VXU3 224 aa28.69■■■□□ 2.18
SKOR1-203ENST00000554054 SCAF1Q9H7N4 1312 aaKnown RBP28.46■■■□□ 2.15
SKOR1-203ENST00000554054 FAM9AQ8IZU1 332 aaPredicted RBP28.42■■■□□ 2.14
SKOR1-203ENST00000554054 ZCCHC6Q5VYS8 1495 aaKnown RBP28.38■■■□□ 2.13
SKOR1-203ENST00000554054 MYO15BQ96JP2 1530 aa28.36■■■□□ 2.13
SKOR1-203ENST00000554054 TRIM26Q12899 539 aaPredicted RBP28.26■■■□□ 2.11
SKOR1-203ENST00000554054 TTBK1Q5TCY1 1321 aaPredicted RBP28.23■■■□□ 2.11
SKOR1-203ENST00000554054 CCDC180Q9P1Z9 1646 aa28.18■■■□□ 2.1
SKOR1-203ENST00000554054 ABCC9O60706 1549 aa28.13■■■□□ 2.09
SKOR1-203ENST00000554054 YTHDC1Q96MU7 727 aaKnown RBP28.08■■■□□ 2.09
SKOR1-203ENST00000554054 GTF3C3Q9Y5Q9 886 aa27.98■■■□□ 2.07
SKOR1-203ENST00000554054 ZEB1P37275 1124 aaPredicted RBP27.96■■■□□ 2.07
SKOR1-203ENST00000554054 CCER1Q8TC90 406 aaPredicted RBP27.86■■■□□ 2.05
SKOR1-203ENST00000554054 NEUROD1Q13562 356 aa27.84■■■□□ 2.05
SKOR1-203ENST00000554054 CENPBP07199 599 aaPredicted RBP27.82■■■□□ 2.04
SKOR1-203ENST00000554054 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.8■■■□□ 2.04
SKOR1-203ENST00000554054 ACIN1Q9UKV3 1341 aaKnown RBP27.72■■■□□ 2.03
SKOR1-203ENST00000554054 MYT1Q01538 1121 aa27.66■■■□□ 2.02
SKOR1-203ENST00000554054 TRIM41Q8WV44 630 aa27.64■■■□□ 2.02
SKOR1-203ENST00000554054 SCRIBQ14160 1630 aa27.57■■■□□ 2
SKOR1-203ENST00000554054 DIEXFQ68CQ4 756 aaKnown RBP27.53■■■□□ 2
SKOR1-203ENST00000554054 PABPN1Q86U42 306 aaKnown RBP eCLIP27.43■■□□□ 1.98
SKOR1-203ENST00000554054 DCAF1Q9Y4B6 1507 aa27.32■■□□□ 1.96
SKOR1-203ENST00000554054 RSF1Q96T23 1441 aaPredicted RBP27.02■■□□□ 1.92
SKOR1-203ENST00000554054 RANGAP1P46060 587 aaPredicted RBP26.98■■□□□ 1.91
SKOR1-203ENST00000554054 CECR2Q9BXF3 1484 aa26.92■■□□□ 1.9
SKOR1-203ENST00000554054 HNRNPUL2Q1KMD3 747 aaKnown RBP26.79■■□□□ 1.88
SKOR1-203ENST00000554054 BCANQ96GW7 911 aa26.78■■□□□ 1.88
SKOR1-203ENST00000554054 MIER1Q8N108 512 aa26.73■■□□□ 1.87
SKOR1-203ENST00000554054 UBTFP17480 764 aaKnown RBP26.73■■□□□ 1.87
SKOR1-203ENST00000554054 ZNF316A6NFI3 1004 aaPredicted RBP26.67■■□□□ 1.86
SKOR1-203ENST00000554054 NACADO15069 1562 aa26.65■■□□□ 1.86
SKOR1-203ENST00000554054 RB1CC1Q8TDY2 1594 aa26.57■■□□□ 1.84
SKOR1-203ENST00000554054 MROH2BQ7Z745 1585 aa26.56■■□□□ 1.84
SKOR1-203ENST00000554054 BCL11AQ9H165 835 aa26.46■■□□□ 1.83
SKOR1-203ENST00000554054 WIZO95785 1651 aa26.31■■□□□ 1.8
SKOR1-203ENST00000554054 APLP2Q06481 763 aa26.26■■□□□ 1.79
SKOR1-203ENST00000554054 ERICH6Q7L0X2 663 aa26.25■■□□□ 1.79
SKOR1-203ENST00000554054 ANP32EQ9BTT0 268 aa26.21■■□□□ 1.79
SKOR1-203ENST00000554054 CSRNP3Q8WYN3 585 aa26.19■■□□□ 1.78
SKOR1-203ENST00000554054 SUPT16HQ9Y5B9 1047 aaKnown RBP26.15■■□□□ 1.78
SKOR1-203ENST00000554054 ITGAEP38570 1179 aa26.12■■□□□ 1.77
SKOR1-203ENST00000554054 BAZ1AQ9NRL2 1556 aaPredicted RBP26.1■■□□□ 1.77
SKOR1-203ENST00000554054 NEFLP07196 543 aa26.06■■□□□ 1.76
SKOR1-203ENST00000554054 FKBP8Q14318 412 aa26.04■■□□□ 1.76
SKOR1-203ENST00000554054 TSHZ2Q9NRE2 1034 aa26.03■■□□□ 1.76
SKOR1-203ENST00000554054 ABCC8Q09428 1581 aa26■■□□□ 1.75
SKOR1-203ENST00000554054 ATP1B4Q9UN42 357 aaPredicted RBP25.99■■□□□ 1.75
SKOR1-203ENST00000554054 CCDC88BA6NC98 1476 aa25.99■■□□□ 1.75
SKOR1-203ENST00000554054 SOGA1O94964 1423 aa25.88■■□□□ 1.73
SKOR1-203ENST00000554054 TRIM52Q96A61 297 aa25.79■■□□□ 1.72
SKOR1-203ENST00000554054 KCNH8Q96L42 1107 aa25.79■■□□□ 1.72
SKOR1-203ENST00000554054 SMARCA4P51532 1647 aa25.75■■□□□ 1.71
SKOR1-203ENST00000554054 IRX6P78412 446 aaPredicted RBP25.75■■□□□ 1.71
SKOR1-203ENST00000554054 BAZ1BQ9UIG0 1483 aaKnown RBP25.72■■□□□ 1.71
SKOR1-203ENST00000554054 HIRIP3Q9BW71 556 aaPredicted RBP25.71■■□□□ 1.71
SKOR1-203ENST00000554054 WRNQ14191 1432 aaPredicted RBP eCLIP25.69■■□□□ 1.7
SKOR1-203ENST00000554054 TOP2AP11388 1531 aaKnown RBP25.67■■□□□ 1.7
SKOR1-203ENST00000554054 RUSC2Q8N2Y8 1516 aa25.66■■□□□ 1.7
SKOR1-203ENST00000554054 CNGB1Q14028 1251 aaPredicted RBP25.66■■□□□ 1.7
SKOR1-203ENST00000554054 DDX10Q13206 875 aaKnown RBP25.63■■□□□ 1.69
SKOR1-203ENST00000554054 RBM19Q9Y4C8 960 aaKnown RBP25.6■■□□□ 1.69
SKOR1-203ENST00000554054 CEP162Q5TB80 1403 aa25.6■■□□□ 1.69
SKOR1-203ENST00000554054 P3H3Q8IVL6 736 aa25.57■■□□□ 1.68
SKOR1-203ENST00000554054 NBR1Q14596 966 aa25.55■■□□□ 1.68
SKOR1-203ENST00000554054 SMARCA2P51531 1590 aa25.52■■□□□ 1.68
SKOR1-203ENST00000554054 ATAD2BQ9ULI0 1458 aa25.49■■□□□ 1.67
SKOR1-203ENST00000554054 BICRAQ9NZM4 1560 aa25.4■■□□□ 1.66
SKOR1-203ENST00000554054 CDK11AQ9UQ88 783 aaPredicted RBP25.38■■□□□ 1.65
SKOR1-203ENST00000554054 UNC13AQ9UPW8 1703 aa25.37■■□□□ 1.65
SKOR1-203ENST00000554054 TNIKQ9UKE5 1360 aa25.36■■□□□ 1.65
SKOR1-203ENST00000554054 CLIP1P30622 1438 aa25.36■■□□□ 1.65
SKOR1-203ENST00000554054 CLSPNQ9HAW4 1339 aa25.35■■□□□ 1.65
SKOR1-203ENST00000554054 RTN4Q9NQC3 1192 aaKnown RBP25.34■■□□□ 1.65
SKOR1-203ENST00000554054 GOLGA3Q08378 1498 aa25.32■■□□□ 1.64
SKOR1-203ENST00000554054 SENP3-EIF4A1A0A087X0R7 540 aa25.27■■□□□ 1.64
SKOR1-203ENST00000554054 EEA1Q15075 1411 aa25.23■■□□□ 1.63
SKOR1-203ENST00000554054 PRKCSHP14314 528 aaPredicted RBP25.23■■□□□ 1.63
SKOR1-203ENST00000554054 ANP32CO43423 234 aa25.22■■□□□ 1.63
SKOR1-203ENST00000554054 HNRNPUQ00839 825 aaKnown RBP eCLIP25.22■■□□□ 1.63
SKOR1-203ENST00000554054 ARID3CA6NKF2 412 aa25.2■■□□□ 1.63
SKOR1-203ENST00000554054 FAM50AQ14320 339 aaKnown RBP25.2■■□□□ 1.62
SKOR1-203ENST00000554054 DEKP35659 375 aaKnown RBP25.18■■□□□ 1.62
SKOR1-203ENST00000554054 CCDC136Q96JN2 1154 aa25.16■■□□□ 1.62
SKOR1-203ENST00000554054 CEP164Q9UPV0 1460 aa25.15■■□□□ 1.62
SKOR1-203ENST00000554054 RTL5Q5HYW3 569 aaPredicted RBP25.14■■□□□ 1.61
SKOR1-203ENST00000554054 RAPGEF2Q9Y4G8 1499 aa25.13■■□□□ 1.61
SKOR1-203ENST00000554054 MSH5O43196 834 aa25.12■■□□□ 1.61
SKOR1-203ENST00000554054 POLR3GLQ9BT43 218 aa25.08■■□□□ 1.61
SKOR1-203ENST00000554054 SIN3AQ96ST3 1273 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms