RNA–Protein interactions for RNA: ENST00000423898.1

SMIM12-202, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM12, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-202ENST00000423898 NISCHQ9Y2I1 1504 aa52.38■■■■■ 5.98
SMIM12-202ENST00000423898 CCDC180Q9P1Z9 1646 aa46.9■■■■■ 5.1
SMIM12-202ENST00000423898 ABCC9O60706 1549 aa46.57■■■■■ 5.05
SMIM12-202ENST00000423898 RB1CC1Q8TDY2 1594 aa44.48■■■■■ 4.71
SMIM12-202ENST00000423898 NACADO15069 1562 aa44.22■■■■■ 4.67
SMIM12-202ENST00000423898 DCAF8L2P0C7V8 631 aa44.12■■■■■ 4.65
SMIM12-202ENST00000423898 MYO15BQ96JP2 1530 aa43.68■■■■■ 4.58
SMIM12-202ENST00000423898 UNC13AQ9UPW8 1703 aa43.53■■■■■ 4.56
SMIM12-202ENST00000423898 ZCCHC6Q5VYS8 1495 aaKnown RBP43.5■■■■■ 4.55
SMIM12-202ENST00000423898 PABPN1Q86U42 306 aaKnown RBP eCLIP43.39■■■■■ 4.54
SMIM12-202ENST00000423898 DNAJC5BQ9UF47 199 aa43.3■■■■■ 4.52
SMIM12-202ENST00000423898 DCAF1Q9Y4B6 1507 aa43.26■■■■■ 4.52
SMIM12-202ENST00000423898 BICRAQ9NZM4 1560 aa43.14■■■■■ 4.5
SMIM12-202ENST00000423898 SCRIBQ14160 1630 aa42.81■■■■■ 4.44
SMIM12-202ENST00000423898 SHROOM4Q9ULL8 1493 aa42.56■■■■■ 4.4
SMIM12-202ENST00000423898 CC2D2AQ9P2K1 1620 aa42.09■■■■■ 4.33
SMIM12-202ENST00000423898 EIF4G1Q04637 1599 aaKnown RBP42.07■■■■■ 4.33
SMIM12-202ENST00000423898 CECR2Q9BXF3 1484 aa41.9■■■■■ 4.3
SMIM12-202ENST00000423898 SMARCA4P51532 1647 aa40.83■■■■■ 4.13
SMIM12-202ENST00000423898 NCAPD3P42695 1498 aa40.77■■■■■ 4.12
SMIM12-202ENST00000423898 ATAD2BQ9ULI0 1458 aa40.74■■■■■ 4.11
SMIM12-202ENST00000423898 SMARCA2P51531 1590 aa40.67■■■■■ 4.1
SMIM12-202ENST00000423898 BAZ1AQ9NRL2 1556 aaPredicted RBP40.66■■■■■ 4.1
SMIM12-202ENST00000423898 HMGXB3Q12766 1538 aa40.57■■■■■ 4.08
SMIM12-202ENST00000423898 BAZ1BQ9UIG0 1483 aaKnown RBP40.4■■■■■ 4.06
SMIM12-202ENST00000423898 MROH2BQ7Z745 1585 aa40.38■■■■■ 4.05
SMIM12-202ENST00000423898 PEG3Q9GZU2 1588 aa40.38■■■■■ 4.05
SMIM12-202ENST00000423898 ERCC6Q03468 1493 aa40.21■■■■■ 4.03
SMIM12-202ENST00000423898 NESP48681 1621 aa40.09■■■■■ 4.01
SMIM12-202ENST00000423898 WIZO95785 1651 aa39.96■■■■□ 3.99
SMIM12-202ENST00000423898 CUX2O14529 1486 aa39.96■■■■□ 3.99
SMIM12-202ENST00000423898 LAMC3Q9Y6N6 1575 aa39.87■■■■□ 3.97
SMIM12-202ENST00000423898 KIF21AQ7Z4S6 1674 aa39.65■■■■□ 3.94
SMIM12-202ENST00000423898 RSF1Q96T23 1441 aaPredicted RBP39.65■■■■□ 3.94
SMIM12-202ENST00000423898 THOC2Q8NI27 1593 aaKnown RBP39.64■■■■□ 3.94
SMIM12-202ENST00000423898 PDS5BQ9NTI5 1447 aa39.6■■■■□ 3.93
SMIM12-202ENST00000423898 CADPSQ9ULU8 1353 aa39.58■■■■□ 3.93
SMIM12-202ENST00000423898 DNAJC5Q9H3Z4 198 aa39.49■■■■□ 3.91
SMIM12-202ENST00000423898 TOP2AP11388 1531 aaKnown RBP39.45■■■■□ 3.91
SMIM12-202ENST00000423898 MRC2Q9UBG0 1479 aa39.26■■■■□ 3.88
SMIM12-202ENST00000423898 CFTRP13569 1480 aa39.2■■■■□ 3.87
SMIM12-202ENST00000423898 CEP164Q9UPV0 1460 aa39.19■■■■□ 3.86
SMIM12-202ENST00000423898 FANCD2Q9BXW9 1451 aa39.17■■■■□ 3.86
SMIM12-202ENST00000423898 WDR62O43379 1518 aa39.15■■■■□ 3.86
SMIM12-202ENST00000423898 CCDC88BA6NC98 1476 aa38.98■■■■□ 3.83
SMIM12-202ENST00000423898 PRDM2Q13029 1718 aa38.96■■■■□ 3.83
SMIM12-202ENST00000423898 URB2Q14146 1524 aaKnown RBP38.82■■■■□ 3.8
SMIM12-202ENST00000423898 TOPBP1Q92547 1522 aa38.47■■■■□ 3.75
SMIM12-202ENST00000423898 ABCC8Q09428 1581 aa38.38■■■■□ 3.73
SMIM12-202ENST00000423898 DNMBPQ6XZF7 1577 aa38.37■■■■□ 3.73
SMIM12-202ENST00000423898 IFT140Q96RY7 1462 aa38.36■■■■□ 3.73
SMIM12-202ENST00000423898 ZNF608Q9ULD9 1512 aaPredicted RBP38.28■■■■□ 3.72
SMIM12-202ENST00000423898 SUPT5HO00267 1087 aaKnown RBP38.21■■■■□ 3.71
SMIM12-202ENST00000423898 OSCARQ8IYS5 282 aa38.17■■■■□ 3.7
SMIM12-202ENST00000423898 EIF4G3O43432 1585 aaKnown RBP38.14■■■■□ 3.7
SMIM12-202ENST00000423898 TARBP1Q13395 1621 aaKnown RBP38.1■■■■□ 3.69
SMIM12-202ENST00000423898 POLA1P09884 1462 aaPredicted RBP38.09■■■■□ 3.69
SMIM12-202ENST00000423898 TRIM41Q8WV44 630 aa38.01■■■■□ 3.68
SMIM12-202ENST00000423898 AQRO60306 1485 aaKnown RBP eCLIP37.98■■■■□ 3.67
SMIM12-202ENST00000423898 RAD54L2Q9Y4B4 1467 aa37.95■■■■□ 3.67
SMIM12-202ENST00000423898 CUX1P39880 1505 aa37.93■■■■□ 3.66
SMIM12-202ENST00000423898 FGD5Q6ZNL6 1462 aa37.91■■■■□ 3.66
SMIM12-202ENST00000423898 SOGA1O94964 1423 aa37.91■■■■□ 3.66
SMIM12-202ENST00000423898 CHD1O14646 1710 aa37.82■■■■□ 3.65
SMIM12-202ENST00000423898 TDRD9Q8NDG6 1382 aaKnown RBP37.79■■■■□ 3.64
SMIM12-202ENST00000423898 WDR97A6NE52 1622 aa37.72■■■■□ 3.63
SMIM12-202ENST00000423898 RIMBP3CA6NJZ7 1639 aa37.72■■■■□ 3.63
SMIM12-202ENST00000423898 RIMBP3BA6NNM3 1639 aa37.72■■■■□ 3.63
SMIM12-202ENST00000423898 RIMBP3Q9UFD9 1639 aa37.72■■■■□ 3.63
SMIM12-202ENST00000423898 FBLN2P98095 1184 aa37.7■■■■□ 3.63
SMIM12-202ENST00000423898 SNAPC4Q5SXM2 1469 aa37.63■■■■□ 3.61
SMIM12-202ENST00000423898 ARHGEF11O15085 1522 aa37.61■■■■□ 3.61
SMIM12-202ENST00000423898 GRIN2BQ13224 1484 aa37.55■■■■□ 3.6
SMIM12-202ENST00000423898 MAGI1Q96QZ7 1491 aaPredicted RBP37.52■■■■□ 3.6
SMIM12-202ENST00000423898 PBRM1Q86U86 1689 aa37.51■■■■□ 3.6
SMIM12-202ENST00000423898 ABCA10Q8WWZ4 1543 aa37.48■■■■□ 3.59
SMIM12-202ENST00000423898 GAPVD1Q14C86 1478 aa37.47■■■■□ 3.59
SMIM12-202ENST00000423898 BIVM-ERCC5R4GMW8 1640 aa37.44■■■■□ 3.58
SMIM12-202ENST00000423898 CHMP7Q8WUX9 453 aaPredicted RBP37.44■■■■□ 3.58
SMIM12-202ENST00000423898 TOP2BQ02880 1626 aa37.43■■■■□ 3.58
SMIM12-202ENST00000423898 ABCA5Q8WWZ7 1642 aa37.43■■■■□ 3.58
SMIM12-202ENST00000423898 WRNQ14191 1432 aaPredicted RBP eCLIP37.42■■■■□ 3.58
SMIM12-202ENST00000423898 SYNJ1O43426 1573 aa37.41■■■■□ 3.58
SMIM12-202ENST00000423898 SYNJ2O15056 1496 aa37.39■■■■□ 3.58
SMIM12-202ENST00000423898 CLASP1Q7Z460 1538 aa37.32■■■■□ 3.57
SMIM12-202ENST00000423898 CYB5RLQ6IPT4 315 aa37.29■■■■□ 3.56
SMIM12-202ENST00000423898 ARAP1Q96P48 1450 aa37.26■■■■□ 3.55
SMIM12-202ENST00000423898 ADAMTS12P58397 1594 aa37.13■■■■□ 3.53
SMIM12-202ENST00000423898 GRIN2AQ12879 1464 aa37.07■■■■□ 3.53
SMIM12-202ENST00000423898 ERICH3Q5RHP9 1530 aa37.03■■■■□ 3.52
SMIM12-202ENST00000423898 FHAD1B1AJZ9 1412 aa36.99■■■■□ 3.51
SMIM12-202ENST00000423898 CEP170Q5SW79 1584 aa36.95■■■■□ 3.51
SMIM12-202ENST00000423898 NUP160Q12769 1436 aa36.91■■■■□ 3.5
SMIM12-202ENST00000423898 TRHP20396 242 aaPredicted RBP36.8■■■■□ 3.48
SMIM12-202ENST00000423898 ERCC6L2Q5T890 1561 aa36.78■■■■□ 3.48
SMIM12-202ENST00000423898 SHROOM2Q13796 1616 aa36.74■■■■□ 3.47
SMIM12-202ENST00000423898 KIF27Q86VH2 1401 aa36.68■■■■□ 3.46
SMIM12-202ENST00000423898 RUSC2Q8N2Y8 1516 aa36.6■■■■□ 3.45
SMIM12-202ENST00000423898 CUL7Q14999 1698 aa36.6■■■■□ 3.45
SMIM12-202ENST00000423898 IGF1RP08069 1367 aa36.59■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms