RNA–Protein interactions for RNA: ENST00000641316.1

AC116562.4-201, humanhuman

BASIC

Gene AC116562.4, Length 2,276 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC116562.4-201ENST00000641316 NISCHQ9Y2I1 1504 aa41.27■■■■■ 4.2
AC116562.4-201ENST00000641316 CCDC180Q9P1Z9 1646 aa35.25■■■■□ 3.23
AC116562.4-201ENST00000641316 SHROOM4Q9ULL8 1493 aa34.91■■■■□ 3.18
AC116562.4-201ENST00000641316 ZCCHC6Q5VYS8 1495 aaKnown RBP34.88■■■■□ 3.17
AC116562.4-201ENST00000641316 SUPT5HO00267 1087 aaKnown RBP34.15■■■■□ 3.06
AC116562.4-201ENST00000641316 DCAF8L2P0C7V8 631 aa34.13■■■■□ 3.05
AC116562.4-201ENST00000641316 DCAF1Q9Y4B6 1507 aa33.91■■■■□ 3.02
AC116562.4-201ENST00000641316 CHIC1Q5VXU3 224 aa33.15■■■□□ 2.9
AC116562.4-201ENST00000641316 MYO15BQ96JP2 1530 aa33.02■■■□□ 2.88
AC116562.4-201ENST00000641316 SCRIBQ14160 1630 aa32.92■■■□□ 2.86
AC116562.4-201ENST00000641316 ABCC9O60706 1549 aa32.88■■■□□ 2.85
AC116562.4-201ENST00000641316 NACADO15069 1562 aa32.61■■■□□ 2.81
AC116562.4-201ENST00000641316 RSF1Q96T23 1441 aaPredicted RBP32.55■■■□□ 2.8
AC116562.4-201ENST00000641316 RB1CC1Q8TDY2 1594 aa32.2■■■□□ 2.75
AC116562.4-201ENST00000641316 CECR2Q9BXF3 1484 aa32.15■■■□□ 2.74
AC116562.4-201ENST00000641316 LOC105371045A0A1W2PR82 267 aa32.11■■■□□ 2.73
AC116562.4-201ENST00000641316 MROH2BQ7Z745 1585 aa32.05■■■□□ 2.72
AC116562.4-201ENST00000641316 PCGF6Q9BYE7 350 aa31.88■■■□□ 2.69
AC116562.4-201ENST00000641316 WIZO95785 1651 aa31.88■■■□□ 2.69
AC116562.4-201ENST00000641316 TRIM41Q8WV44 630 aa31.87■■■□□ 2.69
AC116562.4-201ENST00000641316 HRCP23327 699 aa31.79■■■□□ 2.68
AC116562.4-201ENST00000641316 BAZ1AQ9NRL2 1556 aaPredicted RBP31.73■■■□□ 2.67
AC116562.4-201ENST00000641316 UNC13AQ9UPW8 1703 aa31.62■■■□□ 2.65
AC116562.4-201ENST00000641316 FAM9AQ8IZU1 332 aaPredicted RBP31.54■■■□□ 2.64
AC116562.4-201ENST00000641316 SMARCA4P51532 1647 aa31.48■■■□□ 2.63
AC116562.4-201ENST00000641316 TOP2AP11388 1531 aaKnown RBP31.41■■■□□ 2.62
AC116562.4-201ENST00000641316 EIF4G1Q04637 1599 aaKnown RBP31.4■■■□□ 2.62
AC116562.4-201ENST00000641316 TRIM26Q12899 539 aaPredicted RBP31.38■■■□□ 2.61
AC116562.4-201ENST00000641316 CCDC88BA6NC98 1476 aa31.23■■■□□ 2.59
AC116562.4-201ENST00000641316 EHMT2Q96KQ7 1210 aa31.23■■■□□ 2.59
AC116562.4-201ENST00000641316 BICRAQ9NZM4 1560 aa31.22■■■□□ 2.59
AC116562.4-201ENST00000641316 SMARCA2P51531 1590 aa31.22■■■□□ 2.59
AC116562.4-201ENST00000641316 PABPN1Q86U42 306 aaKnown RBP eCLIP31.18■■■□□ 2.58
AC116562.4-201ENST00000641316 PPARGC1BQ86YN6 1023 aaKnown RBP31.1■■■□□ 2.57
AC116562.4-201ENST00000641316 ABCC8Q09428 1581 aa31.06■■■□□ 2.56
AC116562.4-201ENST00000641316 PEG3Q9GZU2 1588 aa30.91■■■□□ 2.54
AC116562.4-201ENST00000641316 SOGA1O94964 1423 aa30.72■■■□□ 2.51
AC116562.4-201ENST00000641316 ATAD2BQ9ULI0 1458 aa30.69■■■□□ 2.5
AC116562.4-201ENST00000641316 ZEB1P37275 1124 aaPredicted RBP30.63■■■□□ 2.49
AC116562.4-201ENST00000641316 EEA1Q15075 1411 aa30.61■■■□□ 2.49
AC116562.4-201ENST00000641316 BAZ1BQ9UIG0 1483 aaKnown RBP30.61■■■□□ 2.49
AC116562.4-201ENST00000641316 WRNQ14191 1432 aaPredicted RBP eCLIP30.59■■■□□ 2.49
AC116562.4-201ENST00000641316 RUSC2Q8N2Y8 1516 aa30.58■■■□□ 2.49
AC116562.4-201ENST00000641316 CSRNP3Q8WYN3 585 aa30.54■■■□□ 2.48
AC116562.4-201ENST00000641316 CEP162Q5TB80 1403 aa30.51■■■□□ 2.48
AC116562.4-201ENST00000641316 TNIKQ9UKE5 1360 aa30.5■■■□□ 2.47
AC116562.4-201ENST00000641316 SYNJ1O43426 1573 aa30.46■■■□□ 2.47
AC116562.4-201ENST00000641316 UBTFP17480 764 aaKnown RBP30.38■■■□□ 2.45
AC116562.4-201ENST00000641316 GOLGA3Q08378 1498 aa30.37■■■□□ 2.45
AC116562.4-201ENST00000641316 CEP164Q9UPV0 1460 aa30.22■■■□□ 2.43
AC116562.4-201ENST00000641316 KIF21BO75037 1637 aa30.21■■■□□ 2.43
AC116562.4-201ENST00000641316 TTBK1Q5TCY1 1321 aaPredicted RBP30.19■■■□□ 2.42
AC116562.4-201ENST00000641316 HMGXB3Q12766 1538 aa30.16■■■□□ 2.42
AC116562.4-201ENST00000641316 NCAPD3P42695 1498 aa30.15■■■□□ 2.42
AC116562.4-201ENST00000641316 TOP2BQ02880 1626 aa30.13■■■□□ 2.41
AC116562.4-201ENST00000641316 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.12■■■□□ 2.41
AC116562.4-201ENST00000641316 CCER1Q8TC90 406 aaPredicted RBP30.06■■■□□ 2.4
AC116562.4-201ENST00000641316 BIVM-ERCC5R4GMW8 1640 aa30.04■■■□□ 2.4
AC116562.4-201ENST00000641316 RAPGEF2Q9Y4G8 1499 aa30■■■□□ 2.39
AC116562.4-201ENST00000641316 CLIP1P30622 1438 aa30■■■□□ 2.39
AC116562.4-201ENST00000641316 CUX1P39880 1505 aa29.86■■■□□ 2.37
AC116562.4-201ENST00000641316 VPS8Q8N3P4 1428 aa29.86■■■□□ 2.37
AC116562.4-201ENST00000641316 CFTRP13569 1480 aa29.85■■■□□ 2.37
AC116562.4-201ENST00000641316 ERICH3Q5RHP9 1530 aa29.76■■■□□ 2.36
AC116562.4-201ENST00000641316 PRXQ9BXM0 1461 aa29.76■■■□□ 2.35
AC116562.4-201ENST00000641316 RANGAP1P46060 587 aaPredicted RBP29.76■■■□□ 2.35
AC116562.4-201ENST00000641316 KIF27Q86VH2 1401 aa29.68■■■□□ 2.34
AC116562.4-201ENST00000641316 APLP2Q06481 763 aa29.68■■■□□ 2.34
AC116562.4-201ENST00000641316 PRDM2Q13029 1718 aa29.66■■■□□ 2.34
AC116562.4-201ENST00000641316 HNRNPUL2Q1KMD3 747 aaKnown RBP29.56■■■□□ 2.32
AC116562.4-201ENST00000641316 ARAP1Q96P48 1450 aa29.55■■■□□ 2.32
AC116562.4-201ENST00000641316 CADPSQ9ULU8 1353 aa29.54■■■□□ 2.32
AC116562.4-201ENST00000641316 CC2D2AQ9P2K1 1620 aa29.48■■■□□ 2.31
AC116562.4-201ENST00000641316 CUX2O14529 1486 aa29.42■■■□□ 2.3
AC116562.4-201ENST00000641316 FGD5Q6ZNL6 1462 aa29.36■■■□□ 2.29
AC116562.4-201ENST00000641316 IGF1RP08069 1367 aa29.35■■■□□ 2.29
AC116562.4-201ENST00000641316 DIEXFQ68CQ4 756 aaKnown RBP29.34■■■□□ 2.29
AC116562.4-201ENST00000641316 ARHGAP35Q9NRY4 1499 aa29.33■■■□□ 2.29
AC116562.4-201ENST00000641316 KANK4Q5T7N3 995 aaPredicted RBP29.31■■■□□ 2.28
AC116562.4-201ENST00000641316 FANCD2Q9BXW9 1451 aa29.26■■■□□ 2.27
AC116562.4-201ENST00000641316 CARMIL1Q5VZK9 1371 aa29.22■■■□□ 2.27
AC116562.4-201ENST00000641316 ZNF316A6NFI3 1004 aaPredicted RBP29.21■■■□□ 2.27
AC116562.4-201ENST00000641316 RRBP1Q9P2E9 1410 aaKnown RBP29.13■■■□□ 2.25
AC116562.4-201ENST00000641316 DNMBPQ6XZF7 1577 aa29.12■■■□□ 2.25
AC116562.4-201ENST00000641316 SCAF1Q9H7N4 1312 aaKnown RBP29.12■■■□□ 2.25
AC116562.4-201ENST00000641316 NESP48681 1621 aa29.08■■■□□ 2.25
AC116562.4-201ENST00000641316 TOPBP1Q92547 1522 aa29.06■■■□□ 2.24
AC116562.4-201ENST00000641316 RAD54L2Q9Y4B4 1467 aa29.05■■■□□ 2.24
AC116562.4-201ENST00000641316 POLA1P09884 1462 aaPredicted RBP29.03■■■□□ 2.24
AC116562.4-201ENST00000641316 ABCA10Q8WWZ4 1543 aa29.02■■■□□ 2.24
AC116562.4-201ENST00000641316 DHX57Q6P158 1386 aaKnown RBP29.01■■■□□ 2.24
AC116562.4-201ENST00000641316 CCNB3Q8WWL7 1395 aa29.01■■■□□ 2.23
AC116562.4-201ENST00000641316 TIAM1Q13009 1591 aa29■■■□□ 2.23
AC116562.4-201ENST00000641316 CLSPNQ9HAW4 1339 aa28.98■■■□□ 2.23
AC116562.4-201ENST00000641316 MAP3K1Q13233 1512 aa28.98■■■□□ 2.23
AC116562.4-201ENST00000641316 ACIN1Q9UKV3 1341 aaKnown RBP28.96■■■□□ 2.23
AC116562.4-201ENST00000641316 NEUROD1Q13562 356 aa28.92■■■□□ 2.22
AC116562.4-201ENST00000641316 LAMC3Q9Y6N6 1575 aa28.9■■■□□ 2.22
AC116562.4-201ENST00000641316 FHAD1B1AJZ9 1412 aa28.89■■■□□ 2.22
AC116562.4-201ENST00000641316 CUL7Q14999 1698 aa28.87■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms