RNA–Protein interactions for RNA: ENST00000448587.5

TINCR-201, Transcript of TINCR ubiquitin domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TINCR, Length 3,733 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TINCR-201ENST00000448587 NISCHQ9Y2I1 1504 aa37.74■■■■□ 3.63
TINCR-201ENST00000448587 DCAF8L2P0C7V8 631 aa34.87■■■■□ 3.17
TINCR-201ENST00000448587 SHROOM4Q9ULL8 1493 aa34.87■■■■□ 3.17
TINCR-201ENST00000448587 SUPT5HO00267 1087 aaKnown RBP34.46■■■■□ 3.11
TINCR-201ENST00000448587 EHMT2Q96KQ7 1210 aa32.9■■■□□ 2.86
TINCR-201ENST00000448587 PCGF6Q9BYE7 350 aa32.39■■■□□ 2.78
TINCR-201ENST00000448587 FAM9AQ8IZU1 332 aaPredicted RBP32.28■■■□□ 2.76
TINCR-201ENST00000448587 CHIC1Q5VXU3 224 aa32.21■■■□□ 2.75
TINCR-201ENST00000448587 LOC105371045A0A1W2PR82 267 aa32.16■■■□□ 2.74
TINCR-201ENST00000448587 PPARGC1BQ86YN6 1023 aaKnown RBP31.73■■■□□ 2.67
TINCR-201ENST00000448587 TTBK1Q5TCY1 1321 aaPredicted RBP31.66■■■□□ 2.66
TINCR-201ENST00000448587 ZCCHC6Q5VYS8 1495 aaKnown RBP31.63■■■□□ 2.65
TINCR-201ENST00000448587 MYO15BQ96JP2 1530 aa31.57■■■□□ 2.64
TINCR-201ENST00000448587 TRIM41Q8WV44 630 aa31.48■■■□□ 2.63
TINCR-201ENST00000448587 HRCP23327 699 aa31.34■■■□□ 2.61
TINCR-201ENST00000448587 ABCC9O60706 1549 aa31.15■■■□□ 2.58
TINCR-201ENST00000448587 RANGAP1P46060 587 aaPredicted RBP30.95■■■□□ 2.55
TINCR-201ENST00000448587 CCDC180Q9P1Z9 1646 aa30.9■■■□□ 2.54
TINCR-201ENST00000448587 SCRIBQ14160 1630 aa30.79■■■□□ 2.52
TINCR-201ENST00000448587 TRIM26Q12899 539 aaPredicted RBP30.78■■■□□ 2.52
TINCR-201ENST00000448587 PABPN1Q86U42 306 aaKnown RBP eCLIP30.63■■■□□ 2.49
TINCR-201ENST00000448587 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.45■■■□□ 2.47
TINCR-201ENST00000448587 UBTFP17480 764 aaKnown RBP30.45■■■□□ 2.46
TINCR-201ENST00000448587 CCER1Q8TC90 406 aaPredicted RBP30.42■■■□□ 2.46
TINCR-201ENST00000448587 RSF1Q96T23 1441 aaPredicted RBP30.35■■■□□ 2.45
TINCR-201ENST00000448587 CECR2Q9BXF3 1484 aa30.19■■■□□ 2.42
TINCR-201ENST00000448587 DCAF1Q9Y4B6 1507 aa29.99■■■□□ 2.39
TINCR-201ENST00000448587 HNRNPUL2Q1KMD3 747 aaKnown RBP29.98■■■□□ 2.39
TINCR-201ENST00000448587 RB1CC1Q8TDY2 1594 aa29.97■■■□□ 2.39
TINCR-201ENST00000448587 ZEB1P37275 1124 aaPredicted RBP29.92■■■□□ 2.38
TINCR-201ENST00000448587 YTHDC1Q96MU7 727 aaKnown RBP29.88■■■□□ 2.37
TINCR-201ENST00000448587 APLP2Q06481 763 aa29.83■■■□□ 2.37
TINCR-201ENST00000448587 MROH2BQ7Z745 1585 aa29.74■■■□□ 2.35
TINCR-201ENST00000448587 ITGAEP38570 1179 aa29.65■■■□□ 2.34
TINCR-201ENST00000448587 ATP1B4Q9UN42 357 aaPredicted RBP29.61■■■□□ 2.33
TINCR-201ENST00000448587 CSRNP3Q8WYN3 585 aa29.52■■■□□ 2.32
TINCR-201ENST00000448587 WIZO95785 1651 aa29.49■■■□□ 2.31
TINCR-201ENST00000448587 DIEXFQ68CQ4 756 aaKnown RBP29.42■■■□□ 2.3
TINCR-201ENST00000448587 ABCC8Q09428 1581 aa29.41■■■□□ 2.3
TINCR-201ENST00000448587 SOGA1O94964 1423 aa29.35■■■□□ 2.29
TINCR-201ENST00000448587 CCDC88BA6NC98 1476 aa29.28■■■□□ 2.28
TINCR-201ENST00000448587 NACADO15069 1562 aa29.24■■■□□ 2.27
TINCR-201ENST00000448587 SCAF1Q9H7N4 1312 aaKnown RBP29.21■■■□□ 2.27
TINCR-201ENST00000448587 RUSC2Q8N2Y8 1516 aa29.14■■■□□ 2.25
TINCR-201ENST00000448587 CEP162Q5TB80 1403 aa29.11■■■□□ 2.25
TINCR-201ENST00000448587 CENPBP07199 599 aaPredicted RBP29.1■■■□□ 2.25
TINCR-201ENST00000448587 NEUROD1Q13562 356 aa29.09■■■□□ 2.25
TINCR-201ENST00000448587 P3H3Q8IVL6 736 aa29.08■■■□□ 2.25
TINCR-201ENST00000448587 GTF3C3Q9Y5Q9 886 aa29.07■■■□□ 2.24
TINCR-201ENST00000448587 BAZ1AQ9NRL2 1556 aaPredicted RBP28.96■■■□□ 2.23
TINCR-201ENST00000448587 ZNF316A6NFI3 1004 aaPredicted RBP28.84■■■□□ 2.21
TINCR-201ENST00000448587 WRNQ14191 1432 aaPredicted RBP eCLIP28.84■■■□□ 2.21
TINCR-201ENST00000448587 ACIN1Q9UKV3 1341 aaKnown RBP28.84■■■□□ 2.21
TINCR-201ENST00000448587 FAM50AQ14320 339 aaKnown RBP28.76■■■□□ 2.19
TINCR-201ENST00000448587 MIER1Q8N108 512 aa28.74■■■□□ 2.19
TINCR-201ENST00000448587 CLIP1P30622 1438 aa28.73■■■□□ 2.19
TINCR-201ENST00000448587 ARID3CA6NKF2 412 aa28.7■■■□□ 2.18
TINCR-201ENST00000448587 TNIKQ9UKE5 1360 aa28.69■■■□□ 2.18
TINCR-201ENST00000448587 CNGB1Q14028 1251 aaPredicted RBP28.59■■■□□ 2.17
TINCR-201ENST00000448587 HIRIP3Q9BW71 556 aaPredicted RBP28.59■■■□□ 2.17
TINCR-201ENST00000448587 GOLGA3Q08378 1498 aa28.57■■■□□ 2.16
TINCR-201ENST00000448587 TOP2AP11388 1531 aaKnown RBP28.57■■■□□ 2.16
TINCR-201ENST00000448587 SMARCA4P51532 1647 aa28.57■■■□□ 2.16
TINCR-201ENST00000448587 KANK4Q5T7N3 995 aaPredicted RBP28.57■■■□□ 2.16
TINCR-201ENST00000448587 BAZ1BQ9UIG0 1483 aaKnown RBP28.56■■■□□ 2.16
TINCR-201ENST00000448587 SMARCA2P51531 1590 aa28.5■■■□□ 2.15
TINCR-201ENST00000448587 RAPGEF2Q9Y4G8 1499 aa28.41■■■□□ 2.14
TINCR-201ENST00000448587 BCANQ96GW7 911 aa28.4■■■□□ 2.14
TINCR-201ENST00000448587 CEP164Q9UPV0 1460 aa28.31■■■□□ 2.12
TINCR-201ENST00000448587 EEA1Q15075 1411 aa28.27■■■□□ 2.12
TINCR-201ENST00000448587 ATAD2BQ9ULI0 1458 aa28.26■■■□□ 2.11
TINCR-201ENST00000448587 SIN3AQ96ST3 1273 aa28.2■■■□□ 2.11
TINCR-201ENST00000448587 DDX10Q13206 875 aaKnown RBP28.19■■■□□ 2.1
TINCR-201ENST00000448587 POLR3GLQ9BT43 218 aa28.15■■■□□ 2.1
TINCR-201ENST00000448587 PELP1Q8IZL8 1130 aaKnown RBP28.14■■■□□ 2.1
TINCR-201ENST00000448587 VPS8Q8N3P4 1428 aa28.14■■■□□ 2.09
TINCR-201ENST00000448587 SYNJ1O43426 1573 aa28.12■■■□□ 2.09
TINCR-201ENST00000448587 CHIC2Q9UKJ5 165 aa28.1■■■□□ 2.09
TINCR-201ENST00000448587 TRIM52Q96A61 297 aa28.05■■■□□ 2.08
TINCR-201ENST00000448587 KCNH8Q96L42 1107 aa28.03■■■□□ 2.08
TINCR-201ENST00000448587 KIF27Q86VH2 1401 aa27.98■■■□□ 2.07
TINCR-201ENST00000448587 BICRAQ9NZM4 1560 aa27.97■■■□□ 2.07
TINCR-201ENST00000448587 CUX2O14529 1486 aa27.96■■■□□ 2.07
TINCR-201ENST00000448587 SENP3-EIF4A1A0A087X0R7 540 aa27.94■■■□□ 2.06
TINCR-201ENST00000448587 FBLN2P98095 1184 aa27.94■■■□□ 2.06
TINCR-201ENST00000448587 UNC13AQ9UPW8 1703 aa27.93■■■□□ 2.06
TINCR-201ENST00000448587 ZNF326Q5BKZ1 582 aaKnown RBP27.85■■■□□ 2.05
TINCR-201ENST00000448587 RRP7BPQ9NSQ0 103 aa27.85■■■□□ 2.05
TINCR-201ENST00000448587 EIF4G1Q04637 1599 aaKnown RBP27.84■■■□□ 2.05
TINCR-201ENST00000448587 CARMIL1Q5VZK9 1371 aa27.81■■■□□ 2.04
TINCR-201ENST00000448587 CCNB3Q8WWL7 1395 aa27.81■■■□□ 2.04
TINCR-201ENST00000448587 DNAJC5BQ9UF47 199 aa27.78■■■□□ 2.04
TINCR-201ENST00000448587 KIF21BO75037 1637 aa27.77■■■□□ 2.04
TINCR-201ENST00000448587 DHX57Q6P158 1386 aaKnown RBP27.76■■■□□ 2.03
TINCR-201ENST00000448587 NEFLP07196 543 aa27.73■■■□□ 2.03
TINCR-201ENST00000448587 ARAP1Q96P48 1450 aa27.72■■■□□ 2.03
TINCR-201ENST00000448587 ZNF777Q9ULD5 760 aaPredicted RBP27.71■■■□□ 2.03
TINCR-201ENST00000448587 TDRD9Q8NDG6 1382 aaKnown RBP27.71■■■□□ 2.03
TINCR-201ENST00000448587 IRX6P78412 446 aaPredicted RBP27.71■■■□□ 2.03
TINCR-201ENST00000448587 FKBP8Q14318 412 aa27.7■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms