RNA–Protein interactions for RNA: ENST00000252244.3

KRT1-201, Transcript of keratin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT1, Length 2,451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT1-201ENST00000252244 NISCHQ9Y2I1 1504 aa41.82■■■■■ 4.28
KRT1-201ENST00000252244 CCDC180Q9P1Z9 1646 aa35.8■■■■□ 3.32
KRT1-201ENST00000252244 ZCCHC6Q5VYS8 1495 aaKnown RBP35.3■■■■□ 3.24
KRT1-201ENST00000252244 SHROOM4Q9ULL8 1493 aa35.28■■■■□ 3.24
KRT1-201ENST00000252244 DCAF8L2P0C7V8 631 aa34.69■■■■□ 3.14
KRT1-201ENST00000252244 SUPT5HO00267 1087 aaKnown RBP34.4■■■■□ 3.1
KRT1-201ENST00000252244 DCAF1Q9Y4B6 1507 aa34.35■■■■□ 3.09
KRT1-201ENST00000252244 MYO15BQ96JP2 1530 aa33.5■■■□□ 2.95
KRT1-201ENST00000252244 SCRIBQ14160 1630 aa33.43■■■□□ 2.94
KRT1-201ENST00000252244 ABCC9O60706 1549 aa33.41■■■□□ 2.94
KRT1-201ENST00000252244 CHIC1Q5VXU3 224 aa33.28■■■□□ 2.92
KRT1-201ENST00000252244 NACADO15069 1562 aa33.17■■■□□ 2.9
KRT1-201ENST00000252244 RSF1Q96T23 1441 aaPredicted RBP32.91■■■□□ 2.86
KRT1-201ENST00000252244 RB1CC1Q8TDY2 1594 aa32.7■■■□□ 2.83
KRT1-201ENST00000252244 CECR2Q9BXF3 1484 aa32.61■■■□□ 2.81
KRT1-201ENST00000252244 MROH2BQ7Z745 1585 aa32.47■■■□□ 2.79
KRT1-201ENST00000252244 WIZO95785 1651 aa32.3■■■□□ 2.76
KRT1-201ENST00000252244 LOC105371045A0A1W2PR82 267 aa32.25■■■□□ 2.75
KRT1-201ENST00000252244 UNC13AQ9UPW8 1703 aa32.24■■■□□ 2.75
KRT1-201ENST00000252244 BAZ1AQ9NRL2 1556 aaPredicted RBP32.16■■■□□ 2.74
KRT1-201ENST00000252244 TRIM41Q8WV44 630 aa32.1■■■□□ 2.73
KRT1-201ENST00000252244 SMARCA4P51532 1647 aa31.95■■■□□ 2.7
KRT1-201ENST00000252244 PABPN1Q86U42 306 aaKnown RBP eCLIP31.84■■■□□ 2.69
KRT1-201ENST00000252244 BICRAQ9NZM4 1560 aa31.82■■■□□ 2.68
KRT1-201ENST00000252244 PCGF6Q9BYE7 350 aa31.81■■■□□ 2.68
KRT1-201ENST00000252244 TOP2AP11388 1531 aaKnown RBP31.79■■■□□ 2.68
KRT1-201ENST00000252244 FAM9AQ8IZU1 332 aaPredicted RBP31.79■■■□□ 2.68
KRT1-201ENST00000252244 EIF4G1Q04637 1599 aaKnown RBP31.7■■■□□ 2.67
KRT1-201ENST00000252244 CCDC88BA6NC98 1476 aa31.63■■■□□ 2.65
KRT1-201ENST00000252244 SMARCA2P51531 1590 aa31.61■■■□□ 2.65
KRT1-201ENST00000252244 HRCP23327 699 aa31.54■■■□□ 2.64
KRT1-201ENST00000252244 EHMT2Q96KQ7 1210 aa31.5■■■□□ 2.63
KRT1-201ENST00000252244 ABCC8Q09428 1581 aa31.41■■■□□ 2.62
KRT1-201ENST00000252244 PEG3Q9GZU2 1588 aa31.36■■■□□ 2.61
KRT1-201ENST00000252244 TRIM26Q12899 539 aaPredicted RBP31.32■■■□□ 2.6
KRT1-201ENST00000252244 ATAD2BQ9ULI0 1458 aa31.2■■■□□ 2.59
KRT1-201ENST00000252244 BAZ1BQ9UIG0 1483 aaKnown RBP31.1■■■□□ 2.57
KRT1-201ENST00000252244 SOGA1O94964 1423 aa31.02■■■□□ 2.56
KRT1-201ENST00000252244 WRNQ14191 1432 aaPredicted RBP eCLIP30.93■■■□□ 2.54
KRT1-201ENST00000252244 PPARGC1BQ86YN6 1023 aaKnown RBP30.93■■■□□ 2.54
KRT1-201ENST00000252244 RUSC2Q8N2Y8 1516 aa30.89■■■□□ 2.53
KRT1-201ENST00000252244 EEA1Q15075 1411 aa30.83■■■□□ 2.53
KRT1-201ENST00000252244 SYNJ1O43426 1573 aa30.82■■■□□ 2.52
KRT1-201ENST00000252244 CSRNP3Q8WYN3 585 aa30.8■■■□□ 2.52
KRT1-201ENST00000252244 CEP162Q5TB80 1403 aa30.7■■■□□ 2.5
KRT1-201ENST00000252244 TNIKQ9UKE5 1360 aa30.68■■■□□ 2.5
KRT1-201ENST00000252244 NCAPD3P42695 1498 aa30.67■■■□□ 2.5
KRT1-201ENST00000252244 HMGXB3Q12766 1538 aa30.66■■■□□ 2.5
KRT1-201ENST00000252244 UBTFP17480 764 aaKnown RBP30.63■■■□□ 2.49
KRT1-201ENST00000252244 GOLGA3Q08378 1498 aa30.59■■■□□ 2.49
KRT1-201ENST00000252244 TOP2BQ02880 1626 aa30.49■■■□□ 2.47
KRT1-201ENST00000252244 CEP164Q9UPV0 1460 aa30.46■■■□□ 2.47
KRT1-201ENST00000252244 ZEB1P37275 1124 aaPredicted RBP30.45■■■□□ 2.46
KRT1-201ENST00000252244 KIF21BO75037 1637 aa30.44■■■□□ 2.46
KRT1-201ENST00000252244 BIVM-ERCC5R4GMW8 1640 aa30.4■■■□□ 2.46
KRT1-201ENST00000252244 TTBK1Q5TCY1 1321 aaPredicted RBP30.39■■■□□ 2.46
KRT1-201ENST00000252244 CFTRP13569 1480 aa30.31■■■□□ 2.44
KRT1-201ENST00000252244 RAPGEF2Q9Y4G8 1499 aa30.29■■■□□ 2.44
KRT1-201ENST00000252244 CUX1P39880 1505 aa30.27■■■□□ 2.44
KRT1-201ENST00000252244 CLIP1P30622 1438 aa30.21■■■□□ 2.43
KRT1-201ENST00000252244 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.15■■■□□ 2.42
KRT1-201ENST00000252244 CC2D2AQ9P2K1 1620 aa30.12■■■□□ 2.41
KRT1-201ENST00000252244 PRDM2Q13029 1718 aa30.12■■■□□ 2.41
KRT1-201ENST00000252244 RANGAP1P46060 587 aaPredicted RBP30.1■■■□□ 2.41
KRT1-201ENST00000252244 PRXQ9BXM0 1461 aa30.06■■■□□ 2.4
KRT1-201ENST00000252244 CADPSQ9ULU8 1353 aa30.04■■■□□ 2.4
KRT1-201ENST00000252244 VPS8Q8N3P4 1428 aa30.04■■■□□ 2.4
KRT1-201ENST00000252244 CCER1Q8TC90 406 aaPredicted RBP30.04■■■□□ 2.4
KRT1-201ENST00000252244 ERICH3Q5RHP9 1530 aa30.03■■■□□ 2.4
KRT1-201ENST00000252244 KIF27Q86VH2 1401 aa30.02■■■□□ 2.4
KRT1-201ENST00000252244 APLP2Q06481 763 aa29.86■■■□□ 2.37
KRT1-201ENST00000252244 CUX2O14529 1486 aa29.81■■■□□ 2.36
KRT1-201ENST00000252244 ARAP1Q96P48 1450 aa29.79■■■□□ 2.36
KRT1-201ENST00000252244 FGD5Q6ZNL6 1462 aa29.79■■■□□ 2.36
KRT1-201ENST00000252244 FANCD2Q9BXW9 1451 aa29.76■■■□□ 2.35
KRT1-201ENST00000252244 IGF1RP08069 1367 aa29.72■■■□□ 2.35
KRT1-201ENST00000252244 HNRNPUL2Q1KMD3 747 aaKnown RBP29.7■■■□□ 2.34
KRT1-201ENST00000252244 NESP48681 1621 aa29.66■■■□□ 2.34
KRT1-201ENST00000252244 ARHGAP35Q9NRY4 1499 aa29.6■■■□□ 2.33
KRT1-201ENST00000252244 CARMIL1Q5VZK9 1371 aa29.59■■■□□ 2.33
KRT1-201ENST00000252244 DNMBPQ6XZF7 1577 aa29.58■■■□□ 2.33
KRT1-201ENST00000252244 KANK4Q5T7N3 995 aaPredicted RBP29.54■■■□□ 2.32
KRT1-201ENST00000252244 TOPBP1Q92547 1522 aa29.53■■■□□ 2.32
KRT1-201ENST00000252244 RAD54L2Q9Y4B4 1467 aa29.52■■■□□ 2.32
KRT1-201ENST00000252244 POLA1P09884 1462 aaPredicted RBP29.49■■■□□ 2.31
KRT1-201ENST00000252244 ABCA10Q8WWZ4 1543 aa29.44■■■□□ 2.3
KRT1-201ENST00000252244 LAMC3Q9Y6N6 1575 aa29.44■■■□□ 2.3
KRT1-201ENST00000252244 DNAJC5BQ9UF47 199 aa29.42■■■□□ 2.3
KRT1-201ENST00000252244 URB2Q14146 1524 aaKnown RBP29.35■■■□□ 2.29
KRT1-201ENST00000252244 RRBP1Q9P2E9 1410 aaKnown RBP29.27■■■□□ 2.28
KRT1-201ENST00000252244 PDS5BQ9NTI5 1447 aa29.25■■■□□ 2.27
KRT1-201ENST00000252244 CUL7Q14999 1698 aa29.24■■■□□ 2.27
KRT1-201ENST00000252244 WDR97A6NE52 1622 aa29.24■■■□□ 2.27
KRT1-201ENST00000252244 P3H3Q8IVL6 736 aa29.23■■■□□ 2.27
KRT1-201ENST00000252244 TIAM1Q13009 1591 aa29.22■■■□□ 2.27
KRT1-201ENST00000252244 DIEXFQ68CQ4 756 aaKnown RBP29.21■■■□□ 2.27
KRT1-201ENST00000252244 KIF21AQ7Z4S6 1674 aa29.19■■■□□ 2.26
KRT1-201ENST00000252244 CCNB3Q8WWL7 1395 aa29.18■■■□□ 2.26
KRT1-201ENST00000252244 TDRD9Q8NDG6 1382 aaKnown RBP29.17■■■□□ 2.26
KRT1-201ENST00000252244 MAP3K1Q13233 1512 aa29.16■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms