Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
CCDC189A1A4V9 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC32.98■■■□□ 2.87
CCDC189A1A4V9 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC32.93■■■□□ 2.86
CCDC189A1A4V9 AL356512.1-201ENST00000607453 1739 ntBASIC32.46■■■□□ 2.79
CCDC189A1A4V9 HES6-203ENST00000409160 1600 ntTSL 2 BASIC32.46■■■□□ 2.79
CCDC189A1A4V9 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC32.43■■■□□ 2.78
CCDC189A1A4V9 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC32.34■■■□□ 2.77
CCDC189A1A4V9 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC32.28■■■□□ 2.76
CCDC189A1A4V9 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC32.03■■■□□ 2.72
CCDC189A1A4V9 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
CCDC189A1A4V9 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CCDC189A1A4V9 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC31.72■■■□□ 2.67
CCDC189A1A4V9 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC31.7■■■□□ 2.67
CCDC189A1A4V9 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC31.51■■■□□ 2.63
CCDC189A1A4V9 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CCDC189A1A4V9 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CCDC189A1A4V9 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC31.18■■■□□ 2.58
CCDC189A1A4V9 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.57
CCDC189A1A4V9 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC31.08■■■□□ 2.57
CCDC189A1A4V9 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC30.97■■■□□ 2.55
CCDC189A1A4V9 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC30.93■■■□□ 2.54
CCDC189A1A4V9 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC30.91■■■□□ 2.54
CCDC189A1A4V9 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC30.89■■■□□ 2.54
CCDC189A1A4V9 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC30.79■■■□□ 2.52
CCDC189A1A4V9 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC30.79■■■□□ 2.52
CCDC189A1A4V9 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC30.67■■■□□ 2.5
CCDC189A1A4V9 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC30.66■■■□□ 2.5
CCDC189A1A4V9 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC30.65■■■□□ 2.5
CCDC189A1A4V9 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
CCDC189A1A4V9 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
CCDC189A1A4V9 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC30.39■■■□□ 2.46
CCDC189A1A4V9 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC30.37■■■□□ 2.45
CCDC189A1A4V9 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC30.31■■■□□ 2.44
CCDC189A1A4V9 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC30.31■■■□□ 2.44
CCDC189A1A4V9 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
CCDC189A1A4V9 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CCDC189A1A4V9 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC30.22■■■□□ 2.43
CCDC189A1A4V9 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC30.2■■■□□ 2.42
CCDC189A1A4V9 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
CCDC189A1A4V9 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CCDC189A1A4V9 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC30.01■■■□□ 2.39
CCDC189A1A4V9 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC29.99■■■□□ 2.39
CCDC189A1A4V9 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC29.98■■■□□ 2.39
CCDC189A1A4V9 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC29.94■■■□□ 2.38
CCDC189A1A4V9 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
CCDC189A1A4V9 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
CCDC189A1A4V9 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
CCDC189A1A4V9 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CCDC189A1A4V9 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC29.67■■■□□ 2.34
CCDC189A1A4V9 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
CCDC189A1A4V9 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC29.6■■■□□ 2.33
CCDC189A1A4V9 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
CCDC189A1A4V9 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
CCDC189A1A4V9 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
CCDC189A1A4V9 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC29.54■■■□□ 2.32
CCDC189A1A4V9 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC29.52■■■□□ 2.32
CCDC189A1A4V9 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC29.51■■■□□ 2.31
CCDC189A1A4V9 ILK-212ENST00000532063 1617 ntTSL 2 BASIC29.5■■■□□ 2.31
CCDC189A1A4V9 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CCDC189A1A4V9 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC29.46■■■□□ 2.31
CCDC189A1A4V9 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC29.46■■■□□ 2.31
CCDC189A1A4V9 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
CCDC189A1A4V9 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
CCDC189A1A4V9 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CCDC189A1A4V9 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC29.3■■■□□ 2.28
CCDC189A1A4V9 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CCDC189A1A4V9 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC29.27■■■□□ 2.28
CCDC189A1A4V9 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
CCDC189A1A4V9 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC29.19■■■□□ 2.26
CCDC189A1A4V9 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC29.14■■■□□ 2.26
CCDC189A1A4V9 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC29.13■■■□□ 2.25
CCDC189A1A4V9 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
CCDC189A1A4V9 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
CCDC189A1A4V9 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
CCDC189A1A4V9 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC29.01■■■□□ 2.23
CCDC189A1A4V9 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
CCDC189A1A4V9 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC28.98■■■□□ 2.23
CCDC189A1A4V9 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC28.97■■■□□ 2.23
CCDC189A1A4V9 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
CCDC189A1A4V9 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
CCDC189A1A4V9 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
CCDC189A1A4V9 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
CCDC189A1A4V9 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC28.91■■■□□ 2.22
CCDC189A1A4V9 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC28.9■■■□□ 2.22
CCDC189A1A4V9 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC28.89■■■□□ 2.22
CCDC189A1A4V9 ST7-205ENST00000393446 2114 ntTSL 5 BASIC28.87■■■□□ 2.21
CCDC189A1A4V9 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CCDC189A1A4V9 AL161658.1-201ENST00000623641 1967 ntBASIC28.81■■■□□ 2.2
CCDC189A1A4V9 ST7-202ENST00000323984 2142 ntTSL 5 BASIC28.81■■■□□ 2.2
CCDC189A1A4V9 ST7-207ENST00000393449 2127 ntTSL 5 BASIC28.81■■■□□ 2.2
CCDC189A1A4V9 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC28.8■■■□□ 2.2
CCDC189A1A4V9 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
CCDC189A1A4V9 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
CCDC189A1A4V9 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC28.77■■■□□ 2.2
CCDC189A1A4V9 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
CCDC189A1A4V9 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC28.76■■■□□ 2.19
CCDC189A1A4V9 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC28.73■■■□□ 2.19
CCDC189A1A4V9 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC28.72■■■□□ 2.19
CCDC189A1A4V9 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
CCDC189A1A4V9 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC28.68■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms