Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.84■□□□□ 0.134e-9■■■□□ 14.6
SND1Q7KZF4 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.77■□□□□ 0.124e-9■■■□□ 14.6
SND1Q7KZF4 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC15.03■□□□□ -04e-9■■■□□ 14.6
SND1Q7KZF4 RHCE-209ENST00000527747 456 ntTSL 314.92□□□□□ -0.024e-9■■■□□ 14.6
SND1Q7KZF4 RHCE-203ENST00000346452 971 ntTSL 1 (best) BASIC13.86□□□□□ -0.194e-9■■■□□ 14.6
SND1Q7KZF4 THBS1-206ENST00000497720 527 ntTSL 29.28□□□□□ -0.922e-10■■■□□ 14.6
SND1Q7KZF4 PTK7-216ENST00000489707 1935 ntTSL 1 (best)16.74■□□□□ 0.273e-7■■■□□ 14.6
SND1Q7KZF4 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC7.57□□□□□ -1.24e-9■■■□□ 14.6
SND1Q7KZF4 AC015574.1-204ENST00000612595 512 ntTSL 57.22□□□□□ -1.254e-9■■■□□ 14.6
SND1Q7KZF4 HBG2-203ENST00000380259 1772 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.592e-7■■■□□ 14.6
SND1Q7KZF4 HBG2-202ENST00000380252 694 ntTSL 3 BASIC10.88□□□□□ -0.672e-7■■■□□ 14.6
SND1Q7KZF4 GUSB-213ENST00000479038 452 ntTSL 316.98■□□□□ 0.316e-7■■■□□ 14.6
SND1Q7KZF4 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.023e-6■■■□□ 14.6
SND1Q7KZF4 C1S-221ENST00000617865 2844 ntTSL 5 BASIC13.87□□□□□ -0.193e-6■■■□□ 14.6
SND1Q7KZF4 C1S-203ENST00000402681 2522 ntTSL 1 (best) BASIC13.43□□□□□ -0.263e-6■■■□□ 14.6
SND1Q7KZF4 C1S-201ENST00000328916 2972 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.663e-6■■■□□ 14.6
SND1Q7KZF4 C1S-208ENST00000443875 2550 ntTSL 210.83□□□□□ -0.683e-6■■■□□ 14.6
SND1Q7KZF4 C1S-205ENST00000406697 3076 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.063e-6■■■□□ 14.6
SND1Q7KZF4 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.152e-6■■■□□ 14.6
SND1Q7KZF4 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.062e-6■■■□□ 14.6
SND1Q7KZF4 SC5D-208ENST00000534230 1861 ntTSL 5 BASIC12.63□□□□□ -0.392e-6■■■□□ 14.6
SND1Q7KZF4 COL18A1-206ENST00000459895 588 ntTSL 313.29□□□□□ -0.285e-8■■■□□ 14.6
SND1Q7KZF4 IGF2R-203ENST00000475584 597 ntTSL 315.78■□□□□ 0.127e-11■■■□□ 14.6
SND1Q7KZF4 ATP5C1-207ENST00000472202 782 ntTSL 210.02□□□□□ -0.819e-7■■■□□ 14.6
SND1Q7KZF4 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.93■■□□□ 1.17e-7■■■□□ 14.6
SND1Q7KZF4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.59■□□□□ 0.897e-7■■■□□ 14.6
SND1Q7KZF4 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.29■□□□□ 0.527e-7■■■□□ 14.6
SND1Q7KZF4 HYAL2-206ENST00000428028 571 ntTSL 318.08■□□□□ 0.487e-7■■■□□ 14.6
SND1Q7KZF4 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.447e-7■■■□□ 14.6
SND1Q7KZF4 PGAP3-202ENST00000309862 3028 ntTSL 217.3■□□□□ 0.367e-7■■■□□ 14.6
SND1Q7KZF4 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.96■□□□□ 0.317e-7■■■□□ 14.6
SND1Q7KZF4 TM2D2-204ENST00000517872 570 ntTSL 216.91■□□□□ 0.37e-7■■■□□ 14.6
SND1Q7KZF4 PGAP3-205ENST00000577337 587 ntTSL 316.19■□□□□ 0.187e-7■■■□□ 14.6
SND1Q7KZF4 ABCB6-204ENST00000443805 679 ntTSL 215.72■□□□□ 0.117e-7■■■□□ 14.6
SND1Q7KZF4 TRPV2-208ENST00000581560 586 ntTSL 214.87□□□□□ -0.037e-7■■■□□ 14.6
SND1Q7KZF4 HYAL2-205ENST00000426286 357 ntTSL 314.65□□□□□ -0.067e-7■■■□□ 14.6
SND1Q7KZF4 ABCB6-207ENST00000485773 962 ntTSL 214.06□□□□□ -0.167e-7■■■□□ 14.6
SND1Q7KZF4 TRPV2-209ENST00000583241 528 ntTSL 313.32□□□□□ -0.287e-7■■■□□ 14.6
SND1Q7KZF4 TRPV2-207ENST00000580788 530 ntTSL 312.98□□□□□ -0.337e-7■■■□□ 14.6
SND1Q7KZF4 ABCB6-208ENST00000487380 768 ntTSL 212.81□□□□□ -0.367e-7■■■□□ 14.6
SND1Q7KZF4 TRPV2-201ENST00000338560 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.377e-7■■■□□ 14.6
SND1Q7KZF4 TCTN3-204ENST00000430368 1778 ntTSL 2 BASIC12.46□□□□□ -0.416e-10■■■□□ 14.6
SND1Q7KZF4 TRPV2-205ENST00000577277 473 ntTSL 312.46□□□□□ -0.417e-7■■■□□ 14.6
SND1Q7KZF4 ABCB6-213ENST00000497882 3008 ntTSL 212.13□□□□□ -0.477e-7■■■□□ 14.6
SND1Q7KZF4 TCTN3-201ENST00000265993 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.56e-10■■■□□ 14.6
SND1Q7KZF4 TCTN3-203ENST00000371217 2514 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.656e-10■■■□□ 14.6
SND1Q7KZF4 TCTN3-202ENST00000371209 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.676e-10■■■□□ 14.6
SND1Q7KZF4 TCTN3-207ENST00000614499 2739 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.866e-10■■■□□ 14.6
SND1Q7KZF4 TMEM2-207ENST00000474495 779 ntTSL 29.17□□□□□ -0.947e-7■■■□□ 14.6
SND1Q7KZF4 ALG8-216ENST00000531213 517 ntTSL 28.99□□□□□ -0.977e-7■■■□□ 14.6
SND1Q7KZF4 ALG8-209ENST00000526849 612 ntTSL 28.21□□□□□ -1.17e-7■■■□□ 14.6
SND1Q7KZF4 TM2D2-206ENST00000520152 549 ntTSL 48.2□□□□□ -1.17e-7■■■□□ 14.6
SND1Q7KZF4 TM2D2-205ENST00000519186 573 ntTSL 27.8□□□□□ -1.167e-7■■■□□ 14.6
SND1Q7KZF4 STT3B-207ENST00000488151 436 ntTSL 26.12□□□□□ -1.436e-10■■■□□ 14.6
SND1Q7KZF4 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC23.77■■□□□ 1.47e-10■■■□□ 14.6
SND1Q7KZF4 TALDO1-205ENST00000530440 710 ntTSL 311.23□□□□□ -0.612e-15■■■□□ 14.6
SND1Q7KZF4 CLPTM1-208ENST00000588274 805 ntTSL 214.25□□□□□ -0.134e-9■■■□□ 14.6
SND1Q7KZF4 CTSB-226ENST00000532656 573 ntTSL 417.73■□□□□ 0.432e-44■■■□□ 14.6
SND1Q7KZF4 CTSB-213ENST00000527215 545 ntTSL 416.61■□□□□ 0.252e-44■■■□□ 14.6
SND1Q7KZF4 CTSB-215ENST00000528965 556 ntTSL 316.15■□□□□ 0.182e-44■■■□□ 14.6
SND1Q7KZF4 CTSB-231ENST00000534382 764 ntTSL 415.04■□□□□ -02e-44■■■□□ 14.6
SND1Q7KZF4 TFPI-207ENST00000421427 804 ntTSL 310.21□□□□□ -0.771e-14■■■□□ 14.6
SND1Q7KZF4 TFPI-210ENST00000453013 733 ntTSL 28.97□□□□□ -0.971e-14■■■□□ 14.6
SND1Q7KZF4 TFPI-209ENST00000437725 545 ntTSL 47.51□□□□□ -1.211e-14■■■□□ 14.6
SND1Q7KZF4 ATAD1-201ENST00000308448 4640 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.731e-6■■■□□ 14.6
SND1Q7KZF4 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.261e-6■■■□□ 14.6
SND1Q7KZF4 GLB1-213ENST00000473477 577 ntTSL 36.77□□□□□ -1.339e-10■■■□□ 14.6
SND1Q7KZF4 MDH1-205ENST00000432309 844 ntTSL 59.42□□□□□ -0.91e-11■■■□□ 14.6
SND1Q7KZF4 MDH1-204ENST00000421012 573 ntTSL 44.91□□□□□ -1.621e-11■■■□□ 14.6
SND1Q7KZF4 PTRH2-201ENST00000393038 901 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.432e-7■■■□□ 14.6
SND1Q7KZF4 PTRH2-202ENST00000409433 2246 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.672e-7■■■□□ 14.6
SND1Q7KZF4 PTRH2-205ENST00000587935 409 ntTSL 36.48□□□□□ -1.372e-7■■■□□ 14.6
SND1Q7KZF4 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.88□□□□□ -1.472e-7■■■□□ 14.6
SND1Q7KZF4 SSR2-214ENST00000526212 351 ntTSL 58.31□□□□□ -1.082e-12■■■□□ 14.6
SND1Q7KZF4 TKT-204ENST00000450814 1941 ntTSL 218.71■□□□□ 0.598e-12■■□□□ 14.5
SND1Q7KZF4 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.59■□□□□ 0.258e-12■■□□□ 14.5
SND1Q7KZF4 TKT-210ENST00000469678 1871 ntTSL 516.29■□□□□ 0.28e-12■■□□□ 14.5
SND1Q7KZF4 TKT-201ENST00000296289 1931 ntTSL 5 BASIC16.29■□□□□ 0.28e-12■■□□□ 14.5
SND1Q7KZF4 TKT-211ENST00000472528 1055 ntTSL 1 (best)15.8■□□□□ 0.128e-12■■□□□ 14.5
SND1Q7KZF4 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.178e-12■■□□□ 14.5
SND1Q7KZF4 TKT-208ENST00000462138 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.48e-12■■□□□ 14.5
SND1Q7KZF4 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.016e-9■■□□□ 14.5
SND1Q7KZF4 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.016e-9■■□□□ 14.5
SND1Q7KZF4 TMBIM1-219ENST00000465082 2874 ntTSL 214.01□□□□□ -0.176e-9■■□□□ 14.5
SND1Q7KZF4 TMBIM1-214ENST00000444881 2936 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.346e-9■■□□□ 14.5
SND1Q7KZF4 TMBIM1-209ENST00000437694 992 ntTSL 211.02□□□□□ -0.656e-9■■□□□ 14.5
SND1Q7KZF4 TMBIM1-215ENST00000445635 1251 ntTSL 2 BASIC10.49□□□□□ -0.736e-9■■□□□ 14.5
SND1Q7KZF4 AARS-207ENST00000569825 871 ntTSL 217.88■□□□□ 0.455e-10■■□□□ 14.5
SND1Q7KZF4 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.685e-7■■□□□ 14.5
SND1Q7KZF4 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.95■□□□□ 0.625e-7■■□□□ 14.5
SND1Q7KZF4 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.96■□□□□ 0.475e-7■■□□□ 14.5
SND1Q7KZF4 SYVN1-204ENST00000449943 4547 ntTSL 212.56□□□□□ -0.45e-7■■□□□ 14.5
SND1Q7KZF4 SYVN1-206ENST00000526060 3144 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.45e-7■■□□□ 14.5
SND1Q7KZF4 LMNA-209ENST00000459904 916 ntTSL 215.57■□□□□ 0.088e-9■■□□□ 14.5
SND1Q7KZF4 HSD17B12-210ENST00000534053 583 ntTSL 28.88□□□□□ -0.992e-9■■□□□ 14.5
SND1Q7KZF4 TUSC3-210ENST00000510836 1452 ntTSL 526.09■■□□□ 1.773e-8■■□□□ 14.5
SND1Q7KZF4 TUSC3-213ENST00000515859 1627 ntTSL 525.89■■□□□ 1.743e-8■■□□□ 14.5
SND1Q7KZF4 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC22.56■■□□□ 1.23e-8■■□□□ 14.5
SND1Q7KZF4 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.093e-8■■□□□ 14.5
SND1Q7KZF4 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.38■□□□□ 0.373e-8■■□□□ 14.5
Retrieved 100 of 13,567 protein–RNA pairs in 118.5 ms