RNA–Protein interactions for RNA: ENST00000443875.5

C1S-208, Transcript of complement C1s, humanhuman

TSL 2

Gene C1S, Length 2,550 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1S-208ENST00000443875 NISCHQ9Y2I1 1504 aa18.07■□□□□ 0.48
C1S-208ENST00000443875 HRCP23327 699 aa16.37■□□□□ 0.21
C1S-208ENST00000443875 PELP1Q8IZL8 1130 aaKnown RBP15.95■□□□□ 0.14
C1S-208ENST00000443875 PPARGC1BQ86YN6 1023 aaKnown RBP15.95■□□□□ 0.14
C1S-208ENST00000443875 SHROOM4Q9ULL8 1493 aa15.92■□□□□ 0.14
C1S-208ENST00000443875 MYO15BQ96JP2 1530 aa15.92■□□□□ 0.14
C1S-208ENST00000443875 PCGF6Q9BYE7 350 aa15.91■□□□□ 0.14
C1S-208ENST00000443875 SUPT5HO00267 1087 aaKnown RBP15.88■□□□□ 0.13
C1S-208ENST00000443875 CHIC1Q5VXU3 224 aa15.75■□□□□ 0.11
C1S-208ENST00000443875 DCAF1Q9Y4B6 1507 aa15.67■□□□□ 0.1
C1S-208ENST00000443875 CCDC180Q9P1Z9 1646 aa15.52■□□□□ 0.07
C1S-208ENST00000443875 SCAF1Q9H7N4 1312 aaKnown RBP15.51■□□□□ 0.07
C1S-208ENST00000443875 TRIM26Q12899 539 aaPredicted RBP15.44■□□□□ 0.06
C1S-208ENST00000443875 ZCCHC6Q5VYS8 1495 aaKnown RBP15.43■□□□□ 0.06
C1S-208ENST00000443875 ZEB1P37275 1124 aaPredicted RBP15.38■□□□□ 0.05
C1S-208ENST00000443875 MYT1Q01538 1121 aa15.37■□□□□ 0.05
C1S-208ENST00000443875 LOC105371045A0A1W2PR82 267 aa15.32■□□□□ 0.04
C1S-208ENST00000443875 ACIN1Q9UKV3 1341 aaKnown RBP15.12■□□□□ 0.01
C1S-208ENST00000443875 NEUROD1Q13562 356 aa15.04■□□□□ -0
C1S-208ENST00000443875 GTF3C3Q9Y5Q9 886 aa14.96□□□□□ -0.01
C1S-208ENST00000443875 CENPBP07199 599 aaPredicted RBP14.91□□□□□ -0.02
C1S-208ENST00000443875 DCAF8L2P0C7V8 631 aa14.81□□□□□ -0.04
C1S-208ENST00000443875 DIEXFQ68CQ4 756 aaKnown RBP14.79□□□□□ -0.04
C1S-208ENST00000443875 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.72□□□□□ -0.05
C1S-208ENST00000443875 TRIM41Q8WV44 630 aa14.72□□□□□ -0.05
C1S-208ENST00000443875 CCER1Q8TC90 406 aaPredicted RBP14.71□□□□□ -0.06
C1S-208ENST00000443875 ABCC9O60706 1549 aa14.7□□□□□ -0.06
C1S-208ENST00000443875 FAM9AQ8IZU1 332 aaPredicted RBP14.67□□□□□ -0.06
C1S-208ENST00000443875 RSF1Q96T23 1441 aaPredicted RBP14.56□□□□□ -0.08
C1S-208ENST00000443875 EHMT2Q96KQ7 1210 aa14.55□□□□□ -0.08
C1S-208ENST00000443875 RB1CC1Q8TDY2 1594 aa14.54□□□□□ -0.08
C1S-208ENST00000443875 ZNF316A6NFI3 1004 aaPredicted RBP14.5□□□□□ -0.09
C1S-208ENST00000443875 YTHDC1Q96MU7 727 aaKnown RBP14.49□□□□□ -0.09
C1S-208ENST00000443875 TTBK1Q5TCY1 1321 aaPredicted RBP14.46□□□□□ -0.09
C1S-208ENST00000443875 MIER1Q8N108 512 aa14.39□□□□□ -0.11
C1S-208ENST00000443875 WRNQ14191 1432 aaPredicted RBP eCLIP14.37□□□□□ -0.11
C1S-208ENST00000443875 BCL11AQ9H165 835 aa14.31□□□□□ -0.12
C1S-208ENST00000443875 CLSPNQ9HAW4 1339 aa14.31□□□□□ -0.12
C1S-208ENST00000443875 ANP32EQ9BTT0 268 aa14.3□□□□□ -0.12
C1S-208ENST00000443875 SCRIBQ14160 1630 aa14.27□□□□□ -0.13
C1S-208ENST00000443875 SUPT16HQ9Y5B9 1047 aaKnown RBP14.26□□□□□ -0.13
C1S-208ENST00000443875 TSHZ2Q9NRE2 1034 aa14.22□□□□□ -0.13
C1S-208ENST00000443875 CEP162Q5TB80 1403 aa14.22□□□□□ -0.13
C1S-208ENST00000443875 EIF4G1Q04637 1599 aaKnown RBP14.19□□□□□ -0.14
C1S-208ENST00000443875 TNIKQ9UKE5 1360 aa14.13□□□□□ -0.15
C1S-208ENST00000443875 CSRNP3Q8WYN3 585 aa14.12□□□□□ -0.15
C1S-208ENST00000443875 MROH2BQ7Z745 1585 aa14.11□□□□□ -0.15
C1S-208ENST00000443875 CECR2Q9BXF3 1484 aa14.09□□□□□ -0.15
C1S-208ENST00000443875 WIZO95785 1651 aa14.08□□□□□ -0.16
C1S-208ENST00000443875 CCDC88BA6NC98 1476 aa14.04□□□□□ -0.16
C1S-208ENST00000443875 BAZ1AQ9NRL2 1556 aaPredicted RBP14.03□□□□□ -0.16
C1S-208ENST00000443875 HNRNPUL2Q1KMD3 747 aaKnown RBP14.03□□□□□ -0.16
C1S-208ENST00000443875 ABCC8Q09428 1581 aa14.02□□□□□ -0.17
C1S-208ENST00000443875 SOGA1O94964 1423 aa13.98□□□□□ -0.17
C1S-208ENST00000443875 EEA1Q15075 1411 aa13.97□□□□□ -0.17
C1S-208ENST00000443875 GOLGA3Q08378 1498 aa13.94□□□□□ -0.18
C1S-208ENST00000443875 UBTFP17480 764 aaKnown RBP13.93□□□□□ -0.18
C1S-208ENST00000443875 NACADO15069 1562 aa13.92□□□□□ -0.18
C1S-208ENST00000443875 RUSC2Q8N2Y8 1516 aa13.89□□□□□ -0.19
C1S-208ENST00000443875 DHX57Q6P158 1386 aaKnown RBP13.87□□□□□ -0.19
C1S-208ENST00000443875 BCANQ96GW7 911 aa13.86□□□□□ -0.19
C1S-208ENST00000443875 RBM19Q9Y4C8 960 aaKnown RBP13.86□□□□□ -0.19
C1S-208ENST00000443875 VPS8Q8N3P4 1428 aa13.84□□□□□ -0.19
C1S-208ENST00000443875 TOP2AP11388 1531 aaKnown RBP13.84□□□□□ -0.19
C1S-208ENST00000443875 FKBP8Q14318 412 aa13.82□□□□□ -0.2
C1S-208ENST00000443875 CLIP1P30622 1438 aa13.81□□□□□ -0.2
C1S-208ENST00000443875 SMARCA2P51531 1590 aa13.8□□□□□ -0.2
C1S-208ENST00000443875 CEP164Q9UPV0 1460 aa13.79□□□□□ -0.2
C1S-208ENST00000443875 KCNH8Q96L42 1107 aa13.79□□□□□ -0.2
C1S-208ENST00000443875 KIF21BO75037 1637 aa13.79□□□□□ -0.2
C1S-208ENST00000443875 PRKCSHP14314 528 aaPredicted RBP13.77□□□□□ -0.21
C1S-208ENST00000443875 MSH5O43196 834 aa13.76□□□□□ -0.21
C1S-208ENST00000443875 APLP2Q06481 763 aa13.75□□□□□ -0.21
C1S-208ENST00000443875 NEFLP07196 543 aa13.72□□□□□ -0.21
C1S-208ENST00000443875 BAZ1BQ9UIG0 1483 aaKnown RBP13.7□□□□□ -0.22
C1S-208ENST00000443875 FANCIQ9NVI1 1328 aa13.67□□□□□ -0.22
C1S-208ENST00000443875 ITGAEP38570 1179 aa13.66□□□□□ -0.22
C1S-208ENST00000443875 CUX2O14529 1486 aa13.66□□□□□ -0.22
C1S-208ENST00000443875 SMARCA4P51532 1647 aa13.65□□□□□ -0.22
C1S-208ENST00000443875 MYT1LQ9UL68 1186 aa13.61□□□□□ -0.23
C1S-208ENST00000443875 RAPGEF2Q9Y4G8 1499 aa13.61□□□□□ -0.23
C1S-208ENST00000443875 RRBP1Q9P2E9 1410 aaKnown RBP13.61□□□□□ -0.23
C1S-208ENST00000443875 ERICH6Q7L0X2 663 aa13.6□□□□□ -0.23
C1S-208ENST00000443875 SYNJ1O43426 1573 aa13.6□□□□□ -0.23
C1S-208ENST00000443875 DDX10Q13206 875 aaKnown RBP13.57□□□□□ -0.24
C1S-208ENST00000443875 MAPKBP1O60336 1514 aa13.57□□□□□ -0.24
C1S-208ENST00000443875 CCER2I3L3R5 266 aa13.56□□□□□ -0.24
C1S-208ENST00000443875 TRIM52Q96A61 297 aa13.55□□□□□ -0.24
C1S-208ENST00000443875 PPP1R15AO75807 674 aaPredicted RBP13.54□□□□□ -0.24
C1S-208ENST00000443875 KANK4Q5T7N3 995 aaPredicted RBP13.53□□□□□ -0.24
C1S-208ENST00000443875 ARAP1Q96P48 1450 aa13.53□□□□□ -0.24
C1S-208ENST00000443875 DEKP35659 375 aaKnown RBP13.53□□□□□ -0.24
C1S-208ENST00000443875 CDK11AQ9UQ88 783 aaPredicted RBP13.52□□□□□ -0.24
C1S-208ENST00000443875 WDR97A6NE52 1622 aa13.52□□□□□ -0.25
C1S-208ENST00000443875 RANGAP1P46060 587 aaPredicted RBP13.52□□□□□ -0.25
C1S-208ENST00000443875 CCNB3Q8WWL7 1395 aa13.5□□□□□ -0.25
C1S-208ENST00000443875 RAB3GAP2Q9H2M9 1393 aa13.48□□□□□ -0.25
C1S-208ENST00000443875 ANP32CO43423 234 aa13.47□□□□□ -0.25
C1S-208ENST00000443875 ERICH3Q5RHP9 1530 aa13.44□□□□□ -0.26
C1S-208ENST00000443875 IRX6P78412 446 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms