RNA–Protein interactions for RNA: ENST00000338560.11

TRPV2-201, Transcript of transient receptor potential cation channel subfamily V member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPV2, Length 2,808 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPV2-201ENST00000338560 NISCHQ9Y2I1 1504 aa22.15■■□□□ 1.14
TRPV2-201ENST00000338560 SHROOM4Q9ULL8 1493 aa19.46■□□□□ 0.71
TRPV2-201ENST00000338560 SUPT5HO00267 1087 aaKnown RBP19.32■□□□□ 0.68
TRPV2-201ENST00000338560 CCDC180Q9P1Z9 1646 aa19.1■□□□□ 0.65
TRPV2-201ENST00000338560 HRCP23327 699 aa19.07■□□□□ 0.64
TRPV2-201ENST00000338560 PPARGC1BQ86YN6 1023 aaKnown RBP19.04■□□□□ 0.64
TRPV2-201ENST00000338560 PCGF6Q9BYE7 350 aa18.98■□□□□ 0.63
TRPV2-201ENST00000338560 MYO15BQ96JP2 1530 aa18.86■□□□□ 0.61
TRPV2-201ENST00000338560 CHIC1Q5VXU3 224 aa18.73■□□□□ 0.59
TRPV2-201ENST00000338560 ZCCHC6Q5VYS8 1495 aaKnown RBP18.65■□□□□ 0.58
TRPV2-201ENST00000338560 LOC105371045A0A1W2PR82 267 aa18.52■□□□□ 0.55
TRPV2-201ENST00000338560 DCAF8L2P0C7V8 631 aa18.5■□□□□ 0.55
TRPV2-201ENST00000338560 DCAF1Q9Y4B6 1507 aa18.24■□□□□ 0.51
TRPV2-201ENST00000338560 PELP1Q8IZL8 1130 aaKnown RBP18.21■□□□□ 0.51
TRPV2-201ENST00000338560 TRIM26Q12899 539 aaPredicted RBP18.13■□□□□ 0.49
TRPV2-201ENST00000338560 EHMT2Q96KQ7 1210 aa18.12■□□□□ 0.49
TRPV2-201ENST00000338560 SCAF1Q9H7N4 1312 aaKnown RBP18.11■□□□□ 0.49
TRPV2-201ENST00000338560 FAM9AQ8IZU1 332 aaPredicted RBP17.97■□□□□ 0.47
TRPV2-201ENST00000338560 ABCC9O60706 1549 aa17.92■□□□□ 0.46
TRPV2-201ENST00000338560 ZEB1P37275 1124 aaPredicted RBP17.77■□□□□ 0.44
TRPV2-201ENST00000338560 NACADO15069 1562 aa17.74■□□□□ 0.43
TRPV2-201ENST00000338560 SCRIBQ14160 1630 aa17.72■□□□□ 0.43
TRPV2-201ENST00000338560 TRIM41Q8WV44 630 aa17.69■□□□□ 0.42
TRPV2-201ENST00000338560 NEUROD1Q13562 356 aa17.68■□□□□ 0.42
TRPV2-201ENST00000338560 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.66■□□□□ 0.42
TRPV2-201ENST00000338560 TTBK1Q5TCY1 1321 aaPredicted RBP17.61■□□□□ 0.41
TRPV2-201ENST00000338560 MYT1Q01538 1121 aa17.59■□□□□ 0.41
TRPV2-201ENST00000338560 ACIN1Q9UKV3 1341 aaKnown RBP17.58■□□□□ 0.41
TRPV2-201ENST00000338560 GTF3C3Q9Y5Q9 886 aa17.57■□□□□ 0.4
TRPV2-201ENST00000338560 RB1CC1Q8TDY2 1594 aa17.53■□□□□ 0.4
TRPV2-201ENST00000338560 CCER1Q8TC90 406 aaPredicted RBP17.52■□□□□ 0.4
TRPV2-201ENST00000338560 DIEXFQ68CQ4 756 aaKnown RBP17.42■□□□□ 0.38
TRPV2-201ENST00000338560 YTHDC1Q96MU7 727 aaKnown RBP17.39■□□□□ 0.38
TRPV2-201ENST00000338560 RSF1Q96T23 1441 aaPredicted RBP17.33■□□□□ 0.37
TRPV2-201ENST00000338560 CENPBP07199 599 aaPredicted RBP17.31■□□□□ 0.36
TRPV2-201ENST00000338560 CECR2Q9BXF3 1484 aa17.24■□□□□ 0.35
TRPV2-201ENST00000338560 UNC13AQ9UPW8 1703 aa17.23■□□□□ 0.35
TRPV2-201ENST00000338560 MROH2BQ7Z745 1585 aa17.16■□□□□ 0.34
TRPV2-201ENST00000338560 BAZ1AQ9NRL2 1556 aaPredicted RBP17.07■□□□□ 0.32
TRPV2-201ENST00000338560 MIER1Q8N108 512 aa17.06■□□□□ 0.32
TRPV2-201ENST00000338560 WIZO95785 1651 aa17.05■□□□□ 0.32
TRPV2-201ENST00000338560 ZNF316A6NFI3 1004 aaPredicted RBP17.03■□□□□ 0.32
TRPV2-201ENST00000338560 BICRAQ9NZM4 1560 aa17.02■□□□□ 0.31
TRPV2-201ENST00000338560 PABPN1Q86U42 306 aaKnown RBP eCLIP17.01■□□□□ 0.31
TRPV2-201ENST00000338560 HNRNPUL2Q1KMD3 747 aaKnown RBP16.97■□□□□ 0.31
TRPV2-201ENST00000338560 SMARCA4P51532 1647 aa16.96■□□□□ 0.31
TRPV2-201ENST00000338560 UBTFP17480 764 aaKnown RBP16.88■□□□□ 0.29
TRPV2-201ENST00000338560 CEP162Q5TB80 1403 aa16.83■□□□□ 0.28
TRPV2-201ENST00000338560 RANGAP1P46060 587 aaPredicted RBP16.82■□□□□ 0.28
TRPV2-201ENST00000338560 TOP2AP11388 1531 aaKnown RBP16.82■□□□□ 0.28
TRPV2-201ENST00000338560 ABCC8Q09428 1581 aa16.78■□□□□ 0.28
TRPV2-201ENST00000338560 CCDC88BA6NC98 1476 aa16.78■□□□□ 0.28
TRPV2-201ENST00000338560 SOGA1O94964 1423 aa16.77■□□□□ 0.27
TRPV2-201ENST00000338560 RUSC2Q8N2Y8 1516 aa16.7■□□□□ 0.26
TRPV2-201ENST00000338560 SMARCA2P51531 1590 aa16.7■□□□□ 0.26
TRPV2-201ENST00000338560 PEG3Q9GZU2 1588 aa16.69■□□□□ 0.26
TRPV2-201ENST00000338560 WRNQ14191 1432 aaPredicted RBP eCLIP16.67■□□□□ 0.26
TRPV2-201ENST00000338560 SUPT16HQ9Y5B9 1047 aaKnown RBP16.67■□□□□ 0.26
TRPV2-201ENST00000338560 EIF4G1Q04637 1599 aaKnown RBP16.65■□□□□ 0.26
TRPV2-201ENST00000338560 CSRNP3Q8WYN3 585 aa16.65■□□□□ 0.26
TRPV2-201ENST00000338560 BCANQ96GW7 911 aa16.62■□□□□ 0.25
TRPV2-201ENST00000338560 ATAD2BQ9ULI0 1458 aa16.62■□□□□ 0.25
TRPV2-201ENST00000338560 TNIKQ9UKE5 1360 aa16.6■□□□□ 0.25
TRPV2-201ENST00000338560 TSHZ2Q9NRE2 1034 aa16.57■□□□□ 0.24
TRPV2-201ENST00000338560 KCNH8Q96L42 1107 aa16.55■□□□□ 0.24
TRPV2-201ENST00000338560 BAZ1BQ9UIG0 1483 aaKnown RBP16.55■□□□□ 0.24
TRPV2-201ENST00000338560 APLP2Q06481 763 aa16.49■□□□□ 0.23
TRPV2-201ENST00000338560 ANP32EQ9BTT0 268 aa16.46■□□□□ 0.22
TRPV2-201ENST00000338560 BCL11AQ9H165 835 aa16.44■□□□□ 0.22
TRPV2-201ENST00000338560 ITGAEP38570 1179 aa16.42■□□□□ 0.22
TRPV2-201ENST00000338560 GOLGA3Q08378 1498 aa16.41■□□□□ 0.22
TRPV2-201ENST00000338560 CLIP1P30622 1438 aa16.4■□□□□ 0.22
TRPV2-201ENST00000338560 NCAPD3P42695 1498 aa16.39■□□□□ 0.21
TRPV2-201ENST00000338560 HMGXB3Q12766 1538 aa16.37■□□□□ 0.21
TRPV2-201ENST00000338560 FKBP8Q14318 412 aa16.35■□□□□ 0.21
TRPV2-201ENST00000338560 DHX57Q6P158 1386 aaKnown RBP16.33■□□□□ 0.2
TRPV2-201ENST00000338560 KANK4Q5T7N3 995 aaPredicted RBP16.3■□□□□ 0.2
TRPV2-201ENST00000338560 HIRIP3Q9BW71 556 aaPredicted RBP16.28■□□□□ 0.2
TRPV2-201ENST00000338560 VPS8Q8N3P4 1428 aa16.28■□□□□ 0.2
TRPV2-201ENST00000338560 EEA1Q15075 1411 aa16.27■□□□□ 0.2
TRPV2-201ENST00000338560 DDX10Q13206 875 aaKnown RBP16.25■□□□□ 0.19
TRPV2-201ENST00000338560 RAPGEF2Q9Y4G8 1499 aa16.25■□□□□ 0.19
TRPV2-201ENST00000338560 TRIM52Q96A61 297 aa16.23■□□□□ 0.19
TRPV2-201ENST00000338560 SYNJ1O43426 1573 aa16.23■□□□□ 0.19
TRPV2-201ENST00000338560 CEP164Q9UPV0 1460 aa16.22■□□□□ 0.19
TRPV2-201ENST00000338560 CLSPNQ9HAW4 1339 aa16.21■□□□□ 0.19
TRPV2-201ENST00000338560 RBM19Q9Y4C8 960 aaKnown RBP16.19■□□□□ 0.18
TRPV2-201ENST00000338560 CC2D2AQ9P2K1 1620 aa16.18■□□□□ 0.18
TRPV2-201ENST00000338560 KIF21BO75037 1637 aa16.15■□□□□ 0.18
TRPV2-201ENST00000338560 SIN3AQ96ST3 1273 aa16.14■□□□□ 0.17
TRPV2-201ENST00000338560 CFTRP13569 1480 aa16.13■□□□□ 0.17
TRPV2-201ENST00000338560 IRX6P78412 446 aaPredicted RBP16.13■□□□□ 0.17
TRPV2-201ENST00000338560 TOP2BQ02880 1626 aa16.11■□□□□ 0.17
TRPV2-201ENST00000338560 MSH5O43196 834 aa16.09■□□□□ 0.17
TRPV2-201ENST00000338560 NEFLP07196 543 aa16.09■□□□□ 0.17
TRPV2-201ENST00000338560 BIVM-ERCC5R4GMW8 1640 aa16.07■□□□□ 0.16
TRPV2-201ENST00000338560 PRKCSHP14314 528 aaPredicted RBP16.05■□□□□ 0.16
TRPV2-201ENST00000338560 PRDM2Q13029 1718 aa16.03■□□□□ 0.16
TRPV2-201ENST00000338560 CADPSQ9ULU8 1353 aa16.03■□□□□ 0.16
TRPV2-201ENST00000338560 CUX1P39880 1505 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms