RNA–Protein interactions for RNA: ENST00000264027.8

SC5D-201, Transcript of sterol-C5-desaturase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SC5D, Length 2,456 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SC5D-201ENST00000264027 NISCHQ9Y2I1 1504 aa32.33■■■□□ 2.77
SC5D-201ENST00000264027 CCDC180Q9P1Z9 1646 aa28.17■■■□□ 2.1
SC5D-201ENST00000264027 ZCCHC6Q5VYS8 1495 aaKnown RBP27.25■■□□□ 1.95
SC5D-201ENST00000264027 DCAF1Q9Y4B6 1507 aa26.83■■□□□ 1.89
SC5D-201ENST00000264027 MYO15BQ96JP2 1530 aa26.4■■□□□ 1.82
SC5D-201ENST00000264027 SHROOM4Q9ULL8 1493 aa26.4■■□□□ 1.82
SC5D-201ENST00000264027 DCAF8L2P0C7V8 631 aa26.36■■□□□ 1.81
SC5D-201ENST00000264027 ABCC9O60706 1549 aa26.13■■□□□ 1.77
SC5D-201ENST00000264027 NACADO15069 1562 aa26.1■■□□□ 1.77
SC5D-201ENST00000264027 SCRIBQ14160 1630 aa25.8■■□□□ 1.72
SC5D-201ENST00000264027 RB1CC1Q8TDY2 1594 aa25.79■■□□□ 1.72
SC5D-201ENST00000264027 SUPT5HO00267 1087 aaKnown RBP25.55■■□□□ 1.68
SC5D-201ENST00000264027 UNC13AQ9UPW8 1703 aa25.32■■□□□ 1.64
SC5D-201ENST00000264027 RSF1Q96T23 1441 aaPredicted RBP25.15■■□□□ 1.62
SC5D-201ENST00000264027 CECR2Q9BXF3 1484 aa25.01■■□□□ 1.59
SC5D-201ENST00000264027 BAZ1AQ9NRL2 1556 aaPredicted RBP24.97■■□□□ 1.59
SC5D-201ENST00000264027 BICRAQ9NZM4 1560 aa24.97■■□□□ 1.59
SC5D-201ENST00000264027 MROH2BQ7Z745 1585 aa24.95■■□□□ 1.58
SC5D-201ENST00000264027 SMARCA4P51532 1647 aa24.81■■□□□ 1.56
SC5D-201ENST00000264027 WIZO95785 1651 aa24.79■■□□□ 1.56
SC5D-201ENST00000264027 CHIC1Q5VXU3 224 aa24.7■■□□□ 1.54
SC5D-201ENST00000264027 PABPN1Q86U42 306 aaKnown RBP eCLIP24.62■■□□□ 1.53
SC5D-201ENST00000264027 TOP2AP11388 1531 aaKnown RBP24.59■■□□□ 1.53
SC5D-201ENST00000264027 PEG3Q9GZU2 1588 aa24.55■■□□□ 1.52
SC5D-201ENST00000264027 SMARCA2P51531 1590 aa24.35■■□□□ 1.49
SC5D-201ENST00000264027 EIF4G1Q04637 1599 aaKnown RBP24.33■■□□□ 1.49
SC5D-201ENST00000264027 ATAD2BQ9ULI0 1458 aa24.27■■□□□ 1.48
SC5D-201ENST00000264027 CCDC88BA6NC98 1476 aa24.26■■□□□ 1.47
SC5D-201ENST00000264027 BAZ1BQ9UIG0 1483 aaKnown RBP24.16■■□□□ 1.46
SC5D-201ENST00000264027 HMGXB3Q12766 1538 aa24.09■■□□□ 1.45
SC5D-201ENST00000264027 TRIM41Q8WV44 630 aa24.07■■□□□ 1.44
SC5D-201ENST00000264027 NCAPD3P42695 1498 aa24.03■■□□□ 1.44
SC5D-201ENST00000264027 ABCC8Q09428 1581 aa23.84■■□□□ 1.41
SC5D-201ENST00000264027 CC2D2AQ9P2K1 1620 aa23.74■■□□□ 1.39
SC5D-201ENST00000264027 LOC105371045A0A1W2PR82 267 aa23.68■■□□□ 1.38
SC5D-201ENST00000264027 WRNQ14191 1432 aaPredicted RBP eCLIP23.68■■□□□ 1.38
SC5D-201ENST00000264027 PRDM2Q13029 1718 aa23.65■■□□□ 1.38
SC5D-201ENST00000264027 EEA1Q15075 1411 aa23.59■■□□□ 1.37
SC5D-201ENST00000264027 SYNJ1O43426 1573 aa23.59■■□□□ 1.37
SC5D-201ENST00000264027 CFTRP13569 1480 aa23.58■■□□□ 1.37
SC5D-201ENST00000264027 FAM9AQ8IZU1 332 aaPredicted RBP23.54■■□□□ 1.36
SC5D-201ENST00000264027 BIVM-ERCC5R4GMW8 1640 aa23.53■■□□□ 1.36
SC5D-201ENST00000264027 TOP2BQ02880 1626 aa23.52■■□□□ 1.36
SC5D-201ENST00000264027 SOGA1O94964 1423 aa23.42■■□□□ 1.34
SC5D-201ENST00000264027 CADPSQ9ULU8 1353 aa23.4■■□□□ 1.34
SC5D-201ENST00000264027 CUX1P39880 1505 aa23.32■■□□□ 1.32
SC5D-201ENST00000264027 RUSC2Q8N2Y8 1516 aa23.31■■□□□ 1.32
SC5D-201ENST00000264027 CSRNP3Q8WYN3 585 aa23.3■■□□□ 1.32
SC5D-201ENST00000264027 KIF21BO75037 1637 aa23.29■■□□□ 1.32
SC5D-201ENST00000264027 GOLGA3Q08378 1498 aa23.24■■□□□ 1.31
SC5D-201ENST00000264027 LAMC3Q9Y6N6 1575 aa23.22■■□□□ 1.31
SC5D-201ENST00000264027 CEP164Q9UPV0 1460 aa23.21■■□□□ 1.31
SC5D-201ENST00000264027 TNIKQ9UKE5 1360 aa23.21■■□□□ 1.31
SC5D-201ENST00000264027 FANCD2Q9BXW9 1451 aa23.16■■□□□ 1.3
SC5D-201ENST00000264027 EHMT2Q96KQ7 1210 aa23.12■■□□□ 1.29
SC5D-201ENST00000264027 DNMBPQ6XZF7 1577 aa23.07■■□□□ 1.28
SC5D-201ENST00000264027 CEP162Q5TB80 1403 aa23.07■■□□□ 1.28
SC5D-201ENST00000264027 KIF27Q86VH2 1401 aa23.06■■□□□ 1.28
SC5D-201ENST00000264027 ERICH3Q5RHP9 1530 aa23.06■■□□□ 1.28
SC5D-201ENST00000264027 NESP48681 1621 aa23.04■■□□□ 1.28
SC5D-201ENST00000264027 FGD5Q6ZNL6 1462 aa23.01■■□□□ 1.27
SC5D-201ENST00000264027 PRXQ9BXM0 1461 aa23■■□□□ 1.27
SC5D-201ENST00000264027 UBTFP17480 764 aaKnown RBP22.98■■□□□ 1.27
SC5D-201ENST00000264027 TRIM26Q12899 539 aaPredicted RBP22.98■■□□□ 1.27
SC5D-201ENST00000264027 RAPGEF2Q9Y4G8 1499 aa22.97■■□□□ 1.27
SC5D-201ENST00000264027 PDS5BQ9NTI5 1447 aa22.96■■□□□ 1.27
SC5D-201ENST00000264027 TOPBP1Q92547 1522 aa22.96■■□□□ 1.27
SC5D-201ENST00000264027 PCGF6Q9BYE7 350 aa22.95■■□□□ 1.26
SC5D-201ENST00000264027 CUX2O14529 1486 aa22.9■■□□□ 1.26
SC5D-201ENST00000264027 KIF21AQ7Z4S6 1674 aa22.88■■□□□ 1.25
SC5D-201ENST00000264027 ABCA10Q8WWZ4 1543 aa22.86■■□□□ 1.25
SC5D-201ENST00000264027 POLA1P09884 1462 aaPredicted RBP22.86■■□□□ 1.25
SC5D-201ENST00000264027 URB2Q14146 1524 aaKnown RBP22.85■■□□□ 1.25
SC5D-201ENST00000264027 WDR97A6NE52 1622 aa22.83■■□□□ 1.25
SC5D-201ENST00000264027 CLIP1P30622 1438 aa22.82■■□□□ 1.24
SC5D-201ENST00000264027 DNAJC5BQ9UF47 199 aa22.82■■□□□ 1.24
SC5D-201ENST00000264027 IGF1RP08069 1367 aa22.78■■□□□ 1.24
SC5D-201ENST00000264027 RAD54L2Q9Y4B4 1467 aa22.73■■□□□ 1.23
SC5D-201ENST00000264027 CUL7Q14999 1698 aa22.73■■□□□ 1.23
SC5D-201ENST00000264027 VPS8Q8N3P4 1428 aa22.71■■□□□ 1.23
SC5D-201ENST00000264027 ABCA5Q8WWZ7 1642 aa22.68■■□□□ 1.22
SC5D-201ENST00000264027 CARMIL1Q5VZK9 1371 aa22.68■■□□□ 1.22
SC5D-201ENST00000264027 MRC2Q9UBG0 1479 aa22.67■■□□□ 1.22
SC5D-201ENST00000264027 HRCP23327 699 aa22.64■■□□□ 1.21
SC5D-201ENST00000264027 TARBP1Q13395 1621 aaKnown RBP22.63■■□□□ 1.21
SC5D-201ENST00000264027 ARAP1Q96P48 1450 aa22.59■■□□□ 1.21
SC5D-201ENST00000264027 WDR62O43379 1518 aa22.56■■□□□ 1.2
SC5D-201ENST00000264027 GAPVD1Q14C86 1478 aa22.54■■□□□ 1.2
SC5D-201ENST00000264027 CTTNBP2Q8WZ74 1663 aa22.53■■□□□ 1.2
SC5D-201ENST00000264027 ARHGAP35Q9NRY4 1499 aa22.51■■□□□ 1.19
SC5D-201ENST00000264027 PBRM1Q86U86 1689 aa22.49■■□□□ 1.19
SC5D-201ENST00000264027 PPARGC1BQ86YN6 1023 aaKnown RBP22.48■■□□□ 1.19
SC5D-201ENST00000264027 IFT140Q96RY7 1462 aa22.45■■□□□ 1.18
SC5D-201ENST00000264027 TDRD9Q8NDG6 1382 aaKnown RBP22.44■■□□□ 1.18
SC5D-201ENST00000264027 THOC2Q8NI27 1593 aaKnown RBP22.43■■□□□ 1.18
SC5D-201ENST00000264027 EFCAB5A4FU69 1503 aa22.43■■□□□ 1.18
SC5D-201ENST00000264027 APLP2Q06481 763 aa22.41■■□□□ 1.18
SC5D-201ENST00000264027 ERCC6Q03468 1493 aa22.4■■□□□ 1.18
SC5D-201ENST00000264027 RANGAP1P46060 587 aaPredicted RBP22.4■■□□□ 1.18
SC5D-201ENST00000264027 ADAMTS12P58397 1594 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms