RNA–Protein interactions for RNA: ENST00000577337.5

PGAP3-205, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 3

Gene PGAP3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-205ENST00000577337 NISCHQ9Y2I1 1504 aa36.94■■■■□ 3.5
PGAP3-205ENST00000577337 CCDC180Q9P1Z9 1646 aa32.66■■■□□ 2.82
PGAP3-205ENST00000577337 ABCC9O60706 1549 aa31.59■■■□□ 2.65
PGAP3-205ENST00000577337 ZCCHC6Q5VYS8 1495 aaKnown RBP30.84■■■□□ 2.53
PGAP3-205ENST00000577337 DCAF8L2P0C7V8 631 aa30.78■■■□□ 2.52
PGAP3-205ENST00000577337 NACADO15069 1562 aa30.62■■■□□ 2.49
PGAP3-205ENST00000577337 DCAF1Q9Y4B6 1507 aa30.57■■■□□ 2.49
PGAP3-205ENST00000577337 RB1CC1Q8TDY2 1594 aa30.56■■■□□ 2.48
PGAP3-205ENST00000577337 MYO15BQ96JP2 1530 aa30.55■■■□□ 2.48
PGAP3-205ENST00000577337 UNC13AQ9UPW8 1703 aa29.85■■■□□ 2.37
PGAP3-205ENST00000577337 SCRIBQ14160 1630 aa29.84■■■□□ 2.37
PGAP3-205ENST00000577337 PABPN1Q86U42 306 aaKnown RBP eCLIP29.61■■■□□ 2.33
PGAP3-205ENST00000577337 BICRAQ9NZM4 1560 aa29.59■■■□□ 2.33
PGAP3-205ENST00000577337 SHROOM4Q9ULL8 1493 aa29.45■■■□□ 2.31
PGAP3-205ENST00000577337 EIF4G1Q04637 1599 aaKnown RBP28.79■■■□□ 2.2
PGAP3-205ENST00000577337 CECR2Q9BXF3 1484 aa28.72■■■□□ 2.19
PGAP3-205ENST00000577337 DNAJC5BQ9UF47 199 aa28.62■■■□□ 2.17
PGAP3-205ENST00000577337 BAZ1AQ9NRL2 1556 aaPredicted RBP28.61■■■□□ 2.17
PGAP3-205ENST00000577337 CC2D2AQ9P2K1 1620 aa28.58■■■□□ 2.17
PGAP3-205ENST00000577337 SMARCA4P51532 1647 aa28.57■■■□□ 2.16
PGAP3-205ENST00000577337 MROH2BQ7Z745 1585 aa28.47■■■□□ 2.15
PGAP3-205ENST00000577337 ATAD2BQ9ULI0 1458 aa28.32■■■□□ 2.12
PGAP3-205ENST00000577337 SMARCA2P51531 1590 aa28.32■■■□□ 2.12
PGAP3-205ENST00000577337 RSF1Q96T23 1441 aaPredicted RBP28.3■■■□□ 2.12
PGAP3-205ENST00000577337 PEG3Q9GZU2 1588 aa28.27■■■□□ 2.12
PGAP3-205ENST00000577337 NCAPD3P42695 1498 aa28.24■■■□□ 2.11
PGAP3-205ENST00000577337 WIZO95785 1651 aa28.19■■■□□ 2.1
PGAP3-205ENST00000577337 HMGXB3Q12766 1538 aa28.13■■■□□ 2.09
PGAP3-205ENST00000577337 BAZ1BQ9UIG0 1483 aaKnown RBP28.13■■■□□ 2.09
PGAP3-205ENST00000577337 SUPT5HO00267 1087 aaKnown RBP27.94■■■□□ 2.06
PGAP3-205ENST00000577337 TOP2AP11388 1531 aaKnown RBP27.91■■■□□ 2.06
PGAP3-205ENST00000577337 CCDC88BA6NC98 1476 aa27.59■■■□□ 2.01
PGAP3-205ENST00000577337 CADPSQ9ULU8 1353 aa27.47■■□□□ 1.99
PGAP3-205ENST00000577337 NESP48681 1621 aa27.44■■□□□ 1.98
PGAP3-205ENST00000577337 LAMC3Q9Y6N6 1575 aa27.43■■□□□ 1.98
PGAP3-205ENST00000577337 CFTRP13569 1480 aa27.37■■□□□ 1.97
PGAP3-205ENST00000577337 PDS5BQ9NTI5 1447 aa27.27■■□□□ 1.96
PGAP3-205ENST00000577337 ERCC6Q03468 1493 aa27.21■■□□□ 1.95
PGAP3-205ENST00000577337 PRDM2Q13029 1718 aa27.19■■□□□ 1.94
PGAP3-205ENST00000577337 FANCD2Q9BXW9 1451 aa27.13■■□□□ 1.93
PGAP3-205ENST00000577337 KIF21AQ7Z4S6 1674 aa27.12■■□□□ 1.93
PGAP3-205ENST00000577337 CEP164Q9UPV0 1460 aa27.06■■□□□ 1.92
PGAP3-205ENST00000577337 MRC2Q9UBG0 1479 aa26.94■■□□□ 1.9
PGAP3-205ENST00000577337 THOC2Q8NI27 1593 aaKnown RBP26.92■■□□□ 1.9
PGAP3-205ENST00000577337 WDR62O43379 1518 aa26.82■■□□□ 1.88
PGAP3-205ENST00000577337 URB2Q14146 1524 aaKnown RBP26.82■■□□□ 1.88
PGAP3-205ENST00000577337 ABCC8Q09428 1581 aa26.79■■□□□ 1.88
PGAP3-205ENST00000577337 CUX2O14529 1486 aa26.75■■□□□ 1.87
PGAP3-205ENST00000577337 DNMBPQ6XZF7 1577 aa26.75■■□□□ 1.87
PGAP3-205ENST00000577337 TOPBP1Q92547 1522 aa26.75■■□□□ 1.87
PGAP3-205ENST00000577337 CUX1P39880 1505 aa26.69■■□□□ 1.86
PGAP3-205ENST00000577337 WRNQ14191 1432 aaPredicted RBP eCLIP26.68■■□□□ 1.86
PGAP3-205ENST00000577337 SYNJ1O43426 1573 aa26.58■■□□□ 1.85
PGAP3-205ENST00000577337 TOP2BQ02880 1626 aa26.57■■□□□ 1.84
PGAP3-205ENST00000577337 BIVM-ERCC5R4GMW8 1640 aa26.55■■□□□ 1.84
PGAP3-205ENST00000577337 POLA1P09884 1462 aaPredicted RBP26.54■■□□□ 1.84
PGAP3-205ENST00000577337 FGD5Q6ZNL6 1462 aa26.54■■□□□ 1.84
PGAP3-205ENST00000577337 IFT140Q96RY7 1462 aa26.49■■□□□ 1.83
PGAP3-205ENST00000577337 SOGA1O94964 1423 aa26.47■■□□□ 1.83
PGAP3-205ENST00000577337 RAD54L2Q9Y4B4 1467 aa26.43■■□□□ 1.82
PGAP3-205ENST00000577337 TARBP1Q13395 1621 aaKnown RBP26.4■■□□□ 1.82
PGAP3-205ENST00000577337 TRIM41Q8WV44 630 aa26.38■■□□□ 1.81
PGAP3-205ENST00000577337 ZNF608Q9ULD9 1512 aaPredicted RBP26.32■■□□□ 1.8
PGAP3-205ENST00000577337 ABCA10Q8WWZ4 1543 aa26.3■■□□□ 1.8
PGAP3-205ENST00000577337 CHIC1Q5VXU3 224 aa26.29■■□□□ 1.8
PGAP3-205ENST00000577337 WDR97A6NE52 1622 aa26.28■■□□□ 1.8
PGAP3-205ENST00000577337 TDRD9Q8NDG6 1382 aaKnown RBP26.26■■□□□ 1.79
PGAP3-205ENST00000577337 AQRO60306 1485 aaKnown RBP eCLIP26.23■■□□□ 1.79
PGAP3-205ENST00000577337 EIF4G3O43432 1585 aaKnown RBP26.23■■□□□ 1.79
PGAP3-205ENST00000577337 GAPVD1Q14C86 1478 aa26.17■■□□□ 1.78
PGAP3-205ENST00000577337 ABCA5Q8WWZ7 1642 aa26.14■■□□□ 1.78
PGAP3-205ENST00000577337 KIF27Q86VH2 1401 aa26.11■■□□□ 1.77
PGAP3-205ENST00000577337 GRIN2BQ13224 1484 aa26.1■■□□□ 1.77
PGAP3-205ENST00000577337 PBRM1Q86U86 1689 aa26.06■■□□□ 1.76
PGAP3-205ENST00000577337 ERICH3Q5RHP9 1530 aa26■■□□□ 1.75
PGAP3-205ENST00000577337 SNAPC4Q5SXM2 1469 aa26■■□□□ 1.75
PGAP3-205ENST00000577337 MAGI1Q96QZ7 1491 aaPredicted RBP25.98■■□□□ 1.75
PGAP3-205ENST00000577337 RUSC2Q8N2Y8 1516 aa25.97■■□□□ 1.75
PGAP3-205ENST00000577337 IGF1RP08069 1367 aa25.95■■□□□ 1.74
PGAP3-205ENST00000577337 FBLN2P98095 1184 aa25.89■■□□□ 1.74
PGAP3-205ENST00000577337 CHMP7Q8WUX9 453 aaPredicted RBP25.88■■□□□ 1.73
PGAP3-205ENST00000577337 EEA1Q15075 1411 aa25.88■■□□□ 1.73
PGAP3-205ENST00000577337 ADAMTS12P58397 1594 aa25.87■■□□□ 1.73
PGAP3-205ENST00000577337 SYNJ2O15056 1496 aa25.87■■□□□ 1.73
PGAP3-205ENST00000577337 FHAD1B1AJZ9 1412 aa25.87■■□□□ 1.73
PGAP3-205ENST00000577337 CUL7Q14999 1698 aa25.84■■□□□ 1.73
PGAP3-205ENST00000577337 CHD1O14646 1710 aa25.83■■□□□ 1.73
PGAP3-205ENST00000577337 FAM9AQ8IZU1 332 aaPredicted RBP25.82■■□□□ 1.72
PGAP3-205ENST00000577337 CARMIL1Q5VZK9 1371 aa25.82■■□□□ 1.72
PGAP3-205ENST00000577337 CSRNP3Q8WYN3 585 aa25.8■■□□□ 1.72
PGAP3-205ENST00000577337 OSCARQ8IYS5 282 aa25.77■■□□□ 1.72
PGAP3-205ENST00000577337 GRIN2AQ12879 1464 aa25.75■■□□□ 1.71
PGAP3-205ENST00000577337 RAPGEF2Q9Y4G8 1499 aa25.69■■□□□ 1.7
PGAP3-205ENST00000577337 PRXQ9BXM0 1461 aa25.68■■□□□ 1.7
PGAP3-205ENST00000577337 NUP160Q12769 1436 aa25.62■■□□□ 1.69
PGAP3-205ENST00000577337 CEP170Q5SW79 1584 aa25.59■■□□□ 1.69
PGAP3-205ENST00000577337 KIF21BO75037 1637 aa25.55■■□□□ 1.68
PGAP3-205ENST00000577337 CLASP1Q7Z460 1538 aa25.54■■□□□ 1.68
PGAP3-205ENST00000577337 DNAJC5Q9H3Z4 198 aa25.49■■□□□ 1.67
PGAP3-205ENST00000577337 KIAA0586Q9BVV6 1533 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms