RNA–Protein interactions for RNA: ENST00000617865.4

C1S-221, Transcript of complement C1s, humanhuman

TSL 5 BASIC

Gene C1S, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1S-221ENST00000617865 NISCHQ9Y2I1 1504 aa25.39■■□□□ 1.65
C1S-221ENST00000617865 CCDC180Q9P1Z9 1646 aa22.12■■□□□ 1.13
C1S-221ENST00000617865 SHROOM4Q9ULL8 1493 aa22.06■■□□□ 1.12
C1S-221ENST00000617865 SUPT5HO00267 1087 aaKnown RBP21.74■■□□□ 1.07
C1S-221ENST00000617865 DCAF8L2P0C7V8 631 aa21.39■■□□□ 1.02
C1S-221ENST00000617865 ZCCHC6Q5VYS8 1495 aaKnown RBP21.32■■□□□ 1
C1S-221ENST00000617865 DCAF1Q9Y4B6 1507 aa20.99■□□□□ 0.95
C1S-221ENST00000617865 CHIC1Q5VXU3 224 aa20.96■□□□□ 0.95
C1S-221ENST00000617865 MYO15BQ96JP2 1530 aa20.93■□□□□ 0.94
C1S-221ENST00000617865 ABCC9O60706 1549 aa20.88■□□□□ 0.93
C1S-221ENST00000617865 PCGF6Q9BYE7 350 aa20.77■□□□□ 0.92
C1S-221ENST00000617865 LOC105371045A0A1W2PR82 267 aa20.65■□□□□ 0.9
C1S-221ENST00000617865 HRCP23327 699 aa20.64■□□□□ 0.89
C1S-221ENST00000617865 NACADO15069 1562 aa20.6■□□□□ 0.89
C1S-221ENST00000617865 PPARGC1BQ86YN6 1023 aaKnown RBP20.58■□□□□ 0.89
C1S-221ENST00000617865 RB1CC1Q8TDY2 1594 aa20.41■□□□□ 0.86
C1S-221ENST00000617865 SCRIBQ14160 1630 aa20.34■□□□□ 0.85
C1S-221ENST00000617865 EHMT2Q96KQ7 1210 aa20.28■□□□□ 0.84
C1S-221ENST00000617865 FAM9AQ8IZU1 332 aaPredicted RBP20.2■□□□□ 0.82
C1S-221ENST00000617865 TRIM26Q12899 539 aaPredicted RBP20.02■□□□□ 0.79
C1S-221ENST00000617865 TRIM41Q8WV44 630 aa20.02■□□□□ 0.79
C1S-221ENST00000617865 UNC13AQ9UPW8 1703 aa20.01■□□□□ 0.79
C1S-221ENST00000617865 PELP1Q8IZL8 1130 aaKnown RBP19.97■□□□□ 0.79
C1S-221ENST00000617865 RSF1Q96T23 1441 aaPredicted RBP19.92■□□□□ 0.78
C1S-221ENST00000617865 BICRAQ9NZM4 1560 aa19.79■□□□□ 0.76
C1S-221ENST00000617865 CECR2Q9BXF3 1484 aa19.72■□□□□ 0.75
C1S-221ENST00000617865 PABPN1Q86U42 306 aaKnown RBP eCLIP19.71■□□□□ 0.75
C1S-221ENST00000617865 MROH2BQ7Z745 1585 aa19.61■□□□□ 0.73
C1S-221ENST00000617865 TTBK1Q5TCY1 1321 aaPredicted RBP19.61■□□□□ 0.73
C1S-221ENST00000617865 BAZ1AQ9NRL2 1556 aaPredicted RBP19.6■□□□□ 0.73
C1S-221ENST00000617865 MYT1Q01538 1121 aa19.55■□□□□ 0.72
C1S-221ENST00000617865 SMARCA4P51532 1647 aa19.51■□□□□ 0.71
C1S-221ENST00000617865 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.49■□□□□ 0.71
C1S-221ENST00000617865 ZEB1P37275 1124 aaPredicted RBP19.47■□□□□ 0.71
C1S-221ENST00000617865 WIZO95785 1651 aa19.46■□□□□ 0.71
C1S-221ENST00000617865 CCER1Q8TC90 406 aaPredicted RBP19.33■□□□□ 0.69
C1S-221ENST00000617865 SCAF1Q9H7N4 1312 aaKnown RBP19.31■□□□□ 0.68
C1S-221ENST00000617865 PEG3Q9GZU2 1588 aa19.27■□□□□ 0.67
C1S-221ENST00000617865 TOP2AP11388 1531 aaKnown RBP19.25■□□□□ 0.67
C1S-221ENST00000617865 EIF4G1Q04637 1599 aaKnown RBP19.19■□□□□ 0.66
C1S-221ENST00000617865 ABCC8Q09428 1581 aa19.19■□□□□ 0.66
C1S-221ENST00000617865 ATAD2BQ9ULI0 1458 aa19.18■□□□□ 0.66
C1S-221ENST00000617865 SMARCA2P51531 1590 aa19.17■□□□□ 0.66
C1S-221ENST00000617865 CCDC88BA6NC98 1476 aa19.15■□□□□ 0.66
C1S-221ENST00000617865 UBTFP17480 764 aaKnown RBP19.12■□□□□ 0.65
C1S-221ENST00000617865 SOGA1O94964 1423 aa19.1■□□□□ 0.65
C1S-221ENST00000617865 BAZ1BQ9UIG0 1483 aaKnown RBP19.07■□□□□ 0.64
C1S-221ENST00000617865 RANGAP1P46060 587 aaPredicted RBP19.05■□□□□ 0.64
C1S-221ENST00000617865 NEUROD1Q13562 356 aa19.04■□□□□ 0.64
C1S-221ENST00000617865 RUSC2Q8N2Y8 1516 aa19.04■□□□□ 0.64
C1S-221ENST00000617865 NCAPD3P42695 1498 aa19.01■□□□□ 0.63
C1S-221ENST00000617865 DIEXFQ68CQ4 756 aaKnown RBP19.01■□□□□ 0.63
C1S-221ENST00000617865 HMGXB3Q12766 1538 aa18.98■□□□□ 0.63
C1S-221ENST00000617865 CEP162Q5TB80 1403 aa18.98■□□□□ 0.63
C1S-221ENST00000617865 CSRNP3Q8WYN3 585 aa18.97■□□□□ 0.63
C1S-221ENST00000617865 HNRNPUL2Q1KMD3 747 aaKnown RBP18.93■□□□□ 0.62
C1S-221ENST00000617865 DNAJC5BQ9UF47 199 aa18.93■□□□□ 0.62
C1S-221ENST00000617865 ACIN1Q9UKV3 1341 aaKnown RBP18.92■□□□□ 0.62
C1S-221ENST00000617865 CC2D2AQ9P2K1 1620 aa18.9■□□□□ 0.62
C1S-221ENST00000617865 GTF3C3Q9Y5Q9 886 aa18.87■□□□□ 0.61
C1S-221ENST00000617865 YTHDC1Q96MU7 727 aaKnown RBP18.87■□□□□ 0.61
C1S-221ENST00000617865 TNIKQ9UKE5 1360 aa18.82■□□□□ 0.6
C1S-221ENST00000617865 WRNQ14191 1432 aaPredicted RBP eCLIP18.77■□□□□ 0.6
C1S-221ENST00000617865 ZNF316A6NFI3 1004 aaPredicted RBP18.72■□□□□ 0.59
C1S-221ENST00000617865 CENPBP07199 599 aaPredicted RBP18.69■□□□□ 0.58
C1S-221ENST00000617865 MIER1Q8N108 512 aa18.66■□□□□ 0.58
C1S-221ENST00000617865 GOLGA3Q08378 1498 aa18.65■□□□□ 0.58
C1S-221ENST00000617865 APLP2Q06481 763 aa18.61■□□□□ 0.57
C1S-221ENST00000617865 CFTRP13569 1480 aa18.6■□□□□ 0.57
C1S-221ENST00000617865 CLIP1P30622 1438 aa18.59■□□□□ 0.57
C1S-221ENST00000617865 EEA1Q15075 1411 aa18.58■□□□□ 0.56
C1S-221ENST00000617865 SYNJ1O43426 1573 aa18.57■□□□□ 0.56
C1S-221ENST00000617865 RAPGEF2Q9Y4G8 1499 aa18.54■□□□□ 0.56
C1S-221ENST00000617865 CADPSQ9ULU8 1353 aa18.53■□□□□ 0.56
C1S-221ENST00000617865 PRDM2Q13029 1718 aa18.51■□□□□ 0.55
C1S-221ENST00000617865 CEP164Q9UPV0 1460 aa18.49■□□□□ 0.55
C1S-221ENST00000617865 ITGAEP38570 1179 aa18.45■□□□□ 0.54
C1S-221ENST00000617865 KANK4Q5T7N3 995 aaPredicted RBP18.45■□□□□ 0.54
C1S-221ENST00000617865 VPS8Q8N3P4 1428 aa18.43■□□□□ 0.54
C1S-221ENST00000617865 TOP2BQ02880 1626 aa18.4■□□□□ 0.54
C1S-221ENST00000617865 BIVM-ERCC5R4GMW8 1640 aa18.38■□□□□ 0.53
C1S-221ENST00000617865 LAMC3Q9Y6N6 1575 aa18.36■□□□□ 0.53
C1S-221ENST00000617865 NESP48681 1621 aa18.34■□□□□ 0.53
C1S-221ENST00000617865 KIF21BO75037 1637 aa18.34■□□□□ 0.53
C1S-221ENST00000617865 CUX1P39880 1505 aa18.33■□□□□ 0.53
C1S-221ENST00000617865 FANCD2Q9BXW9 1451 aa18.32■□□□□ 0.52
C1S-221ENST00000617865 PRKCSHP14314 528 aaPredicted RBP18.27■□□□□ 0.51
C1S-221ENST00000617865 DHX57Q6P158 1386 aaKnown RBP18.24■□□□□ 0.51
C1S-221ENST00000617865 PDS5BQ9NTI5 1447 aa18.22■□□□□ 0.51
C1S-221ENST00000617865 ARAP1Q96P48 1450 aa18.2■□□□□ 0.5
C1S-221ENST00000617865 KCNH8Q96L42 1107 aa18.18■□□□□ 0.5
C1S-221ENST00000617865 ATP1B4Q9UN42 357 aaPredicted RBP18.18■□□□□ 0.5
C1S-221ENST00000617865 P3H3Q8IVL6 736 aa18.17■□□□□ 0.5
C1S-221ENST00000617865 DNMBPQ6XZF7 1577 aa18.16■□□□□ 0.5
C1S-221ENST00000617865 FGD5Q6ZNL6 1462 aa18.13■□□□□ 0.49
C1S-221ENST00000617865 PRXQ9BXM0 1461 aa18.13■□□□□ 0.49
C1S-221ENST00000617865 TOPBP1Q92547 1522 aa18.13■□□□□ 0.49
C1S-221ENST00000617865 KIF21AQ7Z4S6 1674 aa18.13■□□□□ 0.49
C1S-221ENST00000617865 HIRIP3Q9BW71 556 aaPredicted RBP18.1■□□□□ 0.49
C1S-221ENST00000617865 KIF27Q86VH2 1401 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms