RNA–Protein interactions for RNA: ENST00000328916.7

C1S-201, Transcript of complement C1s, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C1S, Length 2,972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1S-201ENST00000328916 NISCHQ9Y2I1 1504 aa22.31■■□□□ 1.16
C1S-201ENST00000328916 CCDC180Q9P1Z9 1646 aa19.59■□□□□ 0.73
C1S-201ENST00000328916 ZCCHC6Q5VYS8 1495 aaKnown RBP18.79■□□□□ 0.6
C1S-201ENST00000328916 PELP1Q8IZL8 1130 aaKnown RBP18.72■□□□□ 0.59
C1S-201ENST00000328916 DCAF1Q9Y4B6 1507 aa18.6■□□□□ 0.57
C1S-201ENST00000328916 MYT1Q01538 1121 aa18.48■□□□□ 0.55
C1S-201ENST00000328916 MYO15BQ96JP2 1530 aa18.38■□□□□ 0.53
C1S-201ENST00000328916 NACADO15069 1562 aa18.12■□□□□ 0.49
C1S-201ENST00000328916 ABCC9O60706 1549 aa18.09■□□□□ 0.49
C1S-201ENST00000328916 RB1CC1Q8TDY2 1594 aa17.91■□□□□ 0.46
C1S-201ENST00000328916 DCAF8L2P0C7V8 631 aa17.88■□□□□ 0.45
C1S-201ENST00000328916 SHROOM4Q9ULL8 1493 aa17.86■□□□□ 0.45
C1S-201ENST00000328916 TTBK1Q5TCY1 1321 aaPredicted RBP17.84■□□□□ 0.45
C1S-201ENST00000328916 PRKCSHP14314 528 aaPredicted RBP17.8■□□□□ 0.44
C1S-201ENST00000328916 SCRIBQ14160 1630 aa17.77■□□□□ 0.44
C1S-201ENST00000328916 UNC13AQ9UPW8 1703 aa17.7■□□□□ 0.42
C1S-201ENST00000328916 SLC24A1O60721 1099 aa17.55■□□□□ 0.4
C1S-201ENST00000328916 BICRAQ9NZM4 1560 aa17.43■□□□□ 0.38
C1S-201ENST00000328916 APLP2Q06481 763 aa17.28■□□□□ 0.36
C1S-201ENST00000328916 ERICH6Q7L0X2 663 aa17.27■□□□□ 0.36
C1S-201ENST00000328916 RSF1Q96T23 1441 aaPredicted RBP17.26■□□□□ 0.35
C1S-201ENST00000328916 CECR2Q9BXF3 1484 aa17.23■□□□□ 0.35
C1S-201ENST00000328916 BAZ1AQ9NRL2 1556 aaPredicted RBP17.22■□□□□ 0.35
C1S-201ENST00000328916 MROH2BQ7Z745 1585 aa17.19■□□□□ 0.34
C1S-201ENST00000328916 SUPT5HO00267 1087 aaKnown RBP17.17■□□□□ 0.34
C1S-201ENST00000328916 SMARCA4P51532 1647 aa17.17■□□□□ 0.34
C1S-201ENST00000328916 BCL11AQ9H165 835 aa17.13■□□□□ 0.33
C1S-201ENST00000328916 WIZO95785 1651 aa17.08■□□□□ 0.32
C1S-201ENST00000328916 PEG3Q9GZU2 1588 aa17.07■□□□□ 0.32
C1S-201ENST00000328916 PABPN1Q86U42 306 aaKnown RBP eCLIP16.95■□□□□ 0.3
C1S-201ENST00000328916 TOP2AP11388 1531 aaKnown RBP16.94■□□□□ 0.3
C1S-201ENST00000328916 SCAF1Q9H7N4 1312 aaKnown RBP16.92■□□□□ 0.3
C1S-201ENST00000328916 HRCP23327 699 aa16.92■□□□□ 0.3
C1S-201ENST00000328916 FAM9AQ8IZU1 332 aaPredicted RBP16.92■□□□□ 0.3
C1S-201ENST00000328916 SMARCA2P51531 1590 aa16.83■□□□□ 0.28
C1S-201ENST00000328916 EIF4G1Q04637 1599 aaKnown RBP16.83■□□□□ 0.28
C1S-201ENST00000328916 ATAD2BQ9ULI0 1458 aa16.79■□□□□ 0.28
C1S-201ENST00000328916 HMGXB3Q12766 1538 aa16.74■□□□□ 0.27
C1S-201ENST00000328916 CCDC88BA6NC98 1476 aa16.69■□□□□ 0.26
C1S-201ENST00000328916 NCAPD3P42695 1498 aa16.69■□□□□ 0.26
C1S-201ENST00000328916 DAXXQ9UER7 740 aaPredicted RBP16.66■□□□□ 0.26
C1S-201ENST00000328916 CHIC1Q5VXU3 224 aa16.66■□□□□ 0.26
C1S-201ENST00000328916 BAZ1BQ9UIG0 1483 aaKnown RBP16.65■□□□□ 0.26
C1S-201ENST00000328916 PPARGC1BQ86YN6 1023 aaKnown RBP16.55■□□□□ 0.24
C1S-201ENST00000328916 CC2D2AQ9P2K1 1620 aa16.54■□□□□ 0.24
C1S-201ENST00000328916 PRDM2Q13029 1718 aa16.45■□□□□ 0.22
C1S-201ENST00000328916 EIF5BO60841 1220 aaKnown RBP16.38■□□□□ 0.21
C1S-201ENST00000328916 CENPBP07199 599 aaPredicted RBP16.35■□□□□ 0.21
C1S-201ENST00000328916 CFTRP13569 1480 aa16.32■□□□□ 0.2
C1S-201ENST00000328916 ABCC8Q09428 1581 aa16.31■□□□□ 0.2
C1S-201ENST00000328916 BIVM-ERCC5R4GMW8 1640 aa16.26■□□□□ 0.19
C1S-201ENST00000328916 TRIM41Q8WV44 630 aa16.23■□□□□ 0.19
C1S-201ENST00000328916 SYNJ1O43426 1573 aa16.23■□□□□ 0.19
C1S-201ENST00000328916 TOP2BQ02880 1626 aa16.21■□□□□ 0.19
C1S-201ENST00000328916 WRNQ14191 1432 aaPredicted RBP eCLIP16.2■□□□□ 0.18
C1S-201ENST00000328916 CADPSQ9ULU8 1353 aa16.17■□□□□ 0.18
C1S-201ENST00000328916 PLEKHG5O94827 1062 aa16.15■□□□□ 0.18
C1S-201ENST00000328916 LAMC3Q9Y6N6 1575 aa16.14■□□□□ 0.17
C1S-201ENST00000328916 CUX1P39880 1505 aa16.09■□□□□ 0.17
C1S-201ENST00000328916 EEA1Q15075 1411 aa16.08■□□□□ 0.16
C1S-201ENST00000328916 LOC105371045A0A1W2PR82 267 aa16.04■□□□□ 0.16
C1S-201ENST00000328916 ANP32EQ9BTT0 268 aa16■□□□□ 0.15
C1S-201ENST00000328916 ACIN1Q9UKV3 1341 aaKnown RBP16■□□□□ 0.15
C1S-201ENST00000328916 FANCD2Q9BXW9 1451 aa15.99■□□□□ 0.15
C1S-201ENST00000328916 GTF3C3Q9Y5Q9 886 aa15.99■□□□□ 0.15
C1S-201ENST00000328916 SOGA1O94964 1423 aa15.98■□□□□ 0.15
C1S-201ENST00000328916 NESP48681 1621 aa15.97■□□□□ 0.15
C1S-201ENST00000328916 DNMBPQ6XZF7 1577 aa15.96■□□□□ 0.15
C1S-201ENST00000328916 KIF21BO75037 1637 aa15.95■□□□□ 0.14
C1S-201ENST00000328916 RUSC2Q8N2Y8 1516 aa15.93■□□□□ 0.14
C1S-201ENST00000328916 KIF21AQ7Z4S6 1674 aa15.93■□□□□ 0.14
C1S-201ENST00000328916 CSRNP3Q8WYN3 585 aa15.91■□□□□ 0.14
C1S-201ENST00000328916 ANO8Q9HCE9 1232 aaPredicted RBP15.9■□□□□ 0.14
C1S-201ENST00000328916 DNAJC5BQ9UF47 199 aa15.9■□□□□ 0.14
C1S-201ENST00000328916 NEUROD1Q13562 356 aa15.89■□□□□ 0.13
C1S-201ENST00000328916 WDR97A6NE52 1622 aa15.88■□□□□ 0.13
C1S-201ENST00000328916 CEP164Q9UPV0 1460 aa15.88■□□□□ 0.13
C1S-201ENST00000328916 PDS5BQ9NTI5 1447 aa15.87■□□□□ 0.13
C1S-201ENST00000328916 TOPBP1Q92547 1522 aa15.87■□□□□ 0.13
C1S-201ENST00000328916 UBE2Q2Q8WVN8 375 aa15.86■□□□□ 0.13
C1S-201ENST00000328916 FGD5Q6ZNL6 1462 aa15.84■□□□□ 0.13
C1S-201ENST00000328916 URB2Q14146 1524 aaKnown RBP15.84■□□□□ 0.13
C1S-201ENST00000328916 PCGF6Q9BYE7 350 aa15.83■□□□□ 0.12
C1S-201ENST00000328916 ERICH3Q5RHP9 1530 aa15.82■□□□□ 0.12
C1S-201ENST00000328916 GOLGA3Q08378 1498 aa15.8■□□□□ 0.12
C1S-201ENST00000328916 PRXQ9BXM0 1461 aa15.79■□□□□ 0.12
C1S-201ENST00000328916 ABCA10Q8WWZ4 1543 aa15.79■□□□□ 0.12
C1S-201ENST00000328916 POLA1P09884 1462 aaPredicted RBP15.78■□□□□ 0.12
C1S-201ENST00000328916 PODXL2Q9NZ53 605 aa15.78■□□□□ 0.12
C1S-201ENST00000328916 KIF27Q86VH2 1401 aa15.77■□□□□ 0.12
C1S-201ENST00000328916 TNIKQ9UKE5 1360 aa15.77■□□□□ 0.11
C1S-201ENST00000328916 TARBP1Q13395 1621 aaKnown RBP15.73■□□□□ 0.11
C1S-201ENST00000328916 WDR62O43379 1518 aa15.73■□□□□ 0.11
C1S-201ENST00000328916 ABCA5Q8WWZ7 1642 aa15.73■□□□□ 0.11
C1S-201ENST00000328916 MRC2Q9UBG0 1479 aa15.72■□□□□ 0.11
C1S-201ENST00000328916 THOC2Q8NI27 1593 aaKnown RBP15.69■□□□□ 0.1
C1S-201ENST00000328916 CUX2O14529 1486 aa15.69■□□□□ 0.1
C1S-201ENST00000328916 RAPGEF2Q9Y4G8 1499 aa15.69■□□□□ 0.1
C1S-201ENST00000328916 CUL7Q14999 1698 aa15.68■□□□□ 0.1
C1S-201ENST00000328916 EHMT2Q96KQ7 1210 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms