RNA–Protein interactions for RNA: ENST00000371209.5

TCTN3-202, Transcript of tectonic family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCTN3, Length 1,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-202ENST00000371209 AEBP2Q6ZN18 517 aaPredicted RBP26.4■■□□□ 1.82
TCTN3-202ENST00000371209 CHIC1Q5VXU3 224 aa25.03■■□□□ 1.6
TCTN3-202ENST00000371209 NISCHQ9Y2I1 1504 aa24.74■■□□□ 1.55
TCTN3-202ENST00000371209 SENP3Q9H4L4 574 aaPredicted RBP22.39■■□□□ 1.17
TCTN3-202ENST00000371209 PHF23Q9BUL5 403 aaPredicted RBP22.16■■□□□ 1.14
TCTN3-202ENST00000371209 CCDC180Q9P1Z9 1646 aa21.78■■□□□ 1.08
TCTN3-202ENST00000371209 ABCC9O60706 1549 aa20.96■□□□□ 0.95
TCTN3-202ENST00000371209 FOXD1Q16676 465 aa20.94■□□□□ 0.94
TCTN3-202ENST00000371209 ZCCHC6Q5VYS8 1495 aaKnown RBP20.7■□□□□ 0.91
TCTN3-202ENST00000371209 DCAF8L2P0C7V8 631 aa20.48■□□□□ 0.87
TCTN3-202ENST00000371209 DCAF1Q9Y4B6 1507 aa20.46■□□□□ 0.87
TCTN3-202ENST00000371209 MYO15BQ96JP2 1530 aa20.38■□□□□ 0.85
TCTN3-202ENST00000371209 NACADO15069 1562 aa20.38■□□□□ 0.85
TCTN3-202ENST00000371209 RB1CC1Q8TDY2 1594 aa20.3■□□□□ 0.84
TCTN3-202ENST00000371209 PLPPR3Q6T4P5 718 aa19.97■□□□□ 0.79
TCTN3-202ENST00000371209 SCRIBQ14160 1630 aa19.95■□□□□ 0.78
TCTN3-202ENST00000371209 UNC13AQ9UPW8 1703 aa19.89■□□□□ 0.77
TCTN3-202ENST00000371209 SHROOM4Q9ULL8 1493 aa19.83■□□□□ 0.77
TCTN3-202ENST00000371209 BICRAQ9NZM4 1560 aa19.73■□□□□ 0.75
TCTN3-202ENST00000371209 PABPN1Q86U42 306 aaKnown RBP eCLIP19.66■□□□□ 0.74
TCTN3-202ENST00000371209 PPP6R1Q9UPN7 881 aa19.66■□□□□ 0.74
TCTN3-202ENST00000371209 ADRA2BP18089 450 aa19.55■□□□□ 0.72
TCTN3-202ENST00000371209 PIAS4Q8N2W9 510 aaPredicted RBP19.52■□□□□ 0.72
TCTN3-202ENST00000371209 MSH5O43196 834 aa19.5■□□□□ 0.71
TCTN3-202ENST00000371209 CECR2Q9BXF3 1484 aa19.26■□□□□ 0.67
TCTN3-202ENST00000371209 EIF4G1Q04637 1599 aaKnown RBP19.15■□□□□ 0.66
TCTN3-202ENST00000371209 BAZ1AQ9NRL2 1556 aaPredicted RBP19.12■□□□□ 0.65
TCTN3-202ENST00000371209 SMARCA4P51532 1647 aa19.11■□□□□ 0.65
TCTN3-202ENST00000371209 MROH2BQ7Z745 1585 aa19.1■□□□□ 0.65
TCTN3-202ENST00000371209 POTEDQ86YR6 584 aa19.05■□□□□ 0.64
TCTN3-202ENST00000371209 RSF1Q96T23 1441 aaPredicted RBP19.02■□□□□ 0.64
TCTN3-202ENST00000371209 CC2D2AQ9P2K1 1620 aa18.97■□□□□ 0.63
TCTN3-202ENST00000371209 WIZO95785 1651 aa18.91■□□□□ 0.62
TCTN3-202ENST00000371209 PEG3Q9GZU2 1588 aa18.91■□□□□ 0.62
TCTN3-202ENST00000371209 ATAD2BQ9ULI0 1458 aa18.9■□□□□ 0.62
TCTN3-202ENST00000371209 DNAJC5BQ9UF47 199 aa18.89■□□□□ 0.61
TCTN3-202ENST00000371209 SMARCA2P51531 1590 aa18.87■□□□□ 0.61
TCTN3-202ENST00000371209 SUPT5HO00267 1087 aaKnown RBP18.84■□□□□ 0.61
TCTN3-202ENST00000371209 NCAPD3P42695 1498 aa18.81■□□□□ 0.6
TCTN3-202ENST00000371209 BAZ1BQ9UIG0 1483 aaKnown RBP18.75■□□□□ 0.59
TCTN3-202ENST00000371209 HMGXB3Q12766 1538 aa18.75■□□□□ 0.59
TCTN3-202ENST00000371209 TOP2AP11388 1531 aaKnown RBP18.71■□□□□ 0.59
TCTN3-202ENST00000371209 CCDC88BA6NC98 1476 aa18.5■□□□□ 0.55
TCTN3-202ENST00000371209 NESP48681 1621 aa18.28■□□□□ 0.52
TCTN3-202ENST00000371209 CADPSQ9ULU8 1353 aa18.28■□□□□ 0.52
TCTN3-202ENST00000371209 CFTRP13569 1480 aa18.27■□□□□ 0.52
TCTN3-202ENST00000371209 LAMC3Q9Y6N6 1575 aa18.24■□□□□ 0.51
TCTN3-202ENST00000371209 PRDM2Q13029 1718 aa18.16■□□□□ 0.5
TCTN3-202ENST00000371209 PDS5BQ9NTI5 1447 aa18.08■□□□□ 0.49
TCTN3-202ENST00000371209 FANCD2Q9BXW9 1451 aa18.08■□□□□ 0.49
TCTN3-202ENST00000371209 KIF21AQ7Z4S6 1674 aa18.06■□□□□ 0.48
TCTN3-202ENST00000371209 CEP164Q9UPV0 1460 aa18.02■□□□□ 0.47
TCTN3-202ENST00000371209 ERCC6Q03468 1493 aa17.99■□□□□ 0.47
TCTN3-202ENST00000371209 MAPK8IP2Q13387 824 aaPredicted RBP17.98■□□□□ 0.47
TCTN3-202ENST00000371209 ABCC8Q09428 1581 aa17.98■□□□□ 0.47
TCTN3-202ENST00000371209 MRC2Q9UBG0 1479 aa17.9■□□□□ 0.46
TCTN3-202ENST00000371209 URB2Q14146 1524 aaKnown RBP17.9■□□□□ 0.46
TCTN3-202ENST00000371209 WRNQ14191 1432 aaPredicted RBP eCLIP17.9■□□□□ 0.46
TCTN3-202ENST00000371209 THOC2Q8NI27 1593 aaKnown RBP17.89■□□□□ 0.45
TCTN3-202ENST00000371209 CUX1P39880 1505 aa17.89■□□□□ 0.45
TCTN3-202ENST00000371209 SYNJ1O43426 1573 aa17.87■□□□□ 0.45
TCTN3-202ENST00000371209 DNMBPQ6XZF7 1577 aa17.85■□□□□ 0.45
TCTN3-202ENST00000371209 TOPBP1Q92547 1522 aa17.85■□□□□ 0.45
TCTN3-202ENST00000371209 WDR62O43379 1518 aa17.84■□□□□ 0.45
TCTN3-202ENST00000371209 TOP2BQ02880 1626 aa17.82■□□□□ 0.44
TCTN3-202ENST00000371209 BIVM-ERCC5R4GMW8 1640 aa17.82■□□□□ 0.44
TCTN3-202ENST00000371209 DMRT2Q9Y5R5 561 aa17.8■□□□□ 0.44
TCTN3-202ENST00000371209 SCAF1Q9H7N4 1312 aaKnown RBP17.78■□□□□ 0.44
TCTN3-202ENST00000371209 TRIM41Q8WV44 630 aa17.75■□□□□ 0.43
TCTN3-202ENST00000371209 FGD5Q6ZNL6 1462 aa17.75■□□□□ 0.43
TCTN3-202ENST00000371209 POLA1P09884 1462 aaPredicted RBP17.73■□□□□ 0.43
TCTN3-202ENST00000371209 CUX2O14529 1486 aa17.69■□□□□ 0.42
TCTN3-202ENST00000371209 RAD54L2Q9Y4B4 1467 aa17.66■□□□□ 0.42
TCTN3-202ENST00000371209 SOGA1O94964 1423 aa17.64■□□□□ 0.41
TCTN3-202ENST00000371209 TARBP1Q13395 1621 aaKnown RBP17.63■□□□□ 0.41
TCTN3-202ENST00000371209 IFT140Q96RY7 1462 aa17.6■□□□□ 0.41
TCTN3-202ENST00000371209 WDR97A6NE52 1622 aa17.59■□□□□ 0.41
TCTN3-202ENST00000371209 ABCA10Q8WWZ4 1543 aa17.58■□□□□ 0.41
TCTN3-202ENST00000371209 ZNF608Q9ULD9 1512 aaPredicted RBP17.54■□□□□ 0.4
TCTN3-202ENST00000371209 PPP4R3CPQ6ZMV5 832 aa17.54■□□□□ 0.4
TCTN3-202ENST00000371209 RUSC2Q8N2Y8 1516 aa17.52■□□□□ 0.39
TCTN3-202ENST00000371209 TDRD9Q8NDG6 1382 aaKnown RBP17.51■□□□□ 0.39
TCTN3-202ENST00000371209 ABCA5Q8WWZ7 1642 aa17.5■□□□□ 0.39
TCTN3-202ENST00000371209 AQRO60306 1485 aaKnown RBP eCLIP17.48■□□□□ 0.39
TCTN3-202ENST00000371209 EIF4G3O43432 1585 aaKnown RBP17.48■□□□□ 0.39
TCTN3-202ENST00000371209 KIF27Q86VH2 1401 aa17.47■□□□□ 0.39
TCTN3-202ENST00000371209 GAPVD1Q14C86 1478 aa17.45■□□□□ 0.38
TCTN3-202ENST00000371209 FAM9AQ8IZU1 332 aaPredicted RBP17.41■□□□□ 0.38
TCTN3-202ENST00000371209 PBRM1Q86U86 1689 aa17.4■□□□□ 0.38
TCTN3-202ENST00000371209 EEA1Q15075 1411 aa17.4■□□□□ 0.38
TCTN3-202ENST00000371209 GRIN2BQ13224 1484 aa17.38■□□□□ 0.37
TCTN3-202ENST00000371209 IGF1RP08069 1367 aa17.38■□□□□ 0.37
TCTN3-202ENST00000371209 ERICH3Q5RHP9 1530 aa17.37■□□□□ 0.37
TCTN3-202ENST00000371209 CSRNP3Q8WYN3 585 aa17.34■□□□□ 0.37
TCTN3-202ENST00000371209 SNAPC4Q5SXM2 1469 aa17.33■□□□□ 0.36
TCTN3-202ENST00000371209 ADAMTS12P58397 1594 aa17.3■□□□□ 0.36
TCTN3-202ENST00000371209 CUL7Q14999 1698 aa17.29■□□□□ 0.36
TCTN3-202ENST00000371209 MAGI1Q96QZ7 1491 aaPredicted RBP17.28■□□□□ 0.36
TCTN3-202ENST00000371209 PRXQ9BXM0 1461 aa17.28■□□□□ 0.36
TCTN3-202ENST00000371209 CARMIL1Q5VZK9 1371 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms