RNA–Protein interactions for RNA: ENST00000307289.10

SYVN1-202, Transcript of synoviolin 1, humanhuman

TSL 1 (best) BASIC

Gene SYVN1, Length 2,841 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-202ENST00000307289 NISCHQ9Y2I1 1504 aa34.72■■■■□ 3.15
SYVN1-202ENST00000307289 SHROOM4Q9ULL8 1493 aa29.74■■■□□ 2.35
SYVN1-202ENST00000307289 CCDC180Q9P1Z9 1646 aa29.44■■■□□ 2.3
SYVN1-202ENST00000307289 ZCCHC6Q5VYS8 1495 aaKnown RBP29.29■■■□□ 2.28
SYVN1-202ENST00000307289 DCAF8L2P0C7V8 631 aa29.18■■■□□ 2.26
SYVN1-202ENST00000307289 SUPT5HO00267 1087 aaKnown RBP29.02■■■□□ 2.24
SYVN1-202ENST00000307289 DCAF1Q9Y4B6 1507 aa28.31■■■□□ 2.12
SYVN1-202ENST00000307289 CHIC1Q5VXU3 224 aa27.98■■■□□ 2.07
SYVN1-202ENST00000307289 MYO15BQ96JP2 1530 aa27.87■■■□□ 2.05
SYVN1-202ENST00000307289 ABCC9O60706 1549 aa27.84■■■□□ 2.05
SYVN1-202ENST00000307289 SCRIBQ14160 1630 aa27.83■■■□□ 2.05
SYVN1-202ENST00000307289 RSF1Q96T23 1441 aaPredicted RBP27.46■■□□□ 1.99
SYVN1-202ENST00000307289 NACADO15069 1562 aa27.34■■□□□ 1.97
SYVN1-202ENST00000307289 LOC105371045A0A1W2PR82 267 aa27.3■■□□□ 1.96
SYVN1-202ENST00000307289 CECR2Q9BXF3 1484 aa27.26■■□□□ 1.95
SYVN1-202ENST00000307289 RB1CC1Q8TDY2 1594 aa27.15■■□□□ 1.94
SYVN1-202ENST00000307289 MROH2BQ7Z745 1585 aa27.08■■□□□ 1.93
SYVN1-202ENST00000307289 PCGF6Q9BYE7 350 aa26.94■■□□□ 1.9
SYVN1-202ENST00000307289 TRIM41Q8WV44 630 aa26.92■■□□□ 1.9
SYVN1-202ENST00000307289 WIZO95785 1651 aa26.91■■□□□ 1.9
SYVN1-202ENST00000307289 FAM9AQ8IZU1 332 aaPredicted RBP26.88■■□□□ 1.89
SYVN1-202ENST00000307289 EHMT2Q96KQ7 1210 aa26.8■■□□□ 1.88
SYVN1-202ENST00000307289 PABPN1Q86U42 306 aaKnown RBP eCLIP26.69■■□□□ 1.86
SYVN1-202ENST00000307289 UNC13AQ9UPW8 1703 aa26.66■■□□□ 1.86
SYVN1-202ENST00000307289 HRCP23327 699 aa26.62■■□□□ 1.85
SYVN1-202ENST00000307289 BAZ1AQ9NRL2 1556 aaPredicted RBP26.62■■□□□ 1.85
SYVN1-202ENST00000307289 SMARCA4P51532 1647 aa26.47■■□□□ 1.83
SYVN1-202ENST00000307289 PPARGC1BQ86YN6 1023 aaKnown RBP26.38■■□□□ 1.81
SYVN1-202ENST00000307289 BICRAQ9NZM4 1560 aa26.38■■□□□ 1.81
SYVN1-202ENST00000307289 CCDC88BA6NC98 1476 aa26.37■■□□□ 1.81
SYVN1-202ENST00000307289 TOP2AP11388 1531 aaKnown RBP26.35■■□□□ 1.81
SYVN1-202ENST00000307289 EIF4G1Q04637 1599 aaKnown RBP26.33■■□□□ 1.81
SYVN1-202ENST00000307289 TRIM26Q12899 539 aaPredicted RBP26.31■■□□□ 1.8
SYVN1-202ENST00000307289 ABCC8Q09428 1581 aa26.29■■□□□ 1.8
SYVN1-202ENST00000307289 SMARCA2P51531 1590 aa26.27■■□□□ 1.8
SYVN1-202ENST00000307289 SOGA1O94964 1423 aa26.01■■□□□ 1.75
SYVN1-202ENST00000307289 RUSC2Q8N2Y8 1516 aa25.94■■□□□ 1.74
SYVN1-202ENST00000307289 ATAD2BQ9ULI0 1458 aa25.9■■□□□ 1.74
SYVN1-202ENST00000307289 PEG3Q9GZU2 1588 aa25.88■■□□□ 1.73
SYVN1-202ENST00000307289 TTBK1Q5TCY1 1321 aaPredicted RBP25.82■■□□□ 1.72
SYVN1-202ENST00000307289 BAZ1BQ9UIG0 1483 aaKnown RBP25.81■■□□□ 1.72
SYVN1-202ENST00000307289 WRNQ14191 1432 aaPredicted RBP eCLIP25.76■■□□□ 1.71
SYVN1-202ENST00000307289 CSRNP3Q8WYN3 585 aa25.76■■□□□ 1.71
SYVN1-202ENST00000307289 UBTFP17480 764 aaKnown RBP25.71■■□□□ 1.71
SYVN1-202ENST00000307289 SYNJ1O43426 1573 aa25.68■■□□□ 1.7
SYVN1-202ENST00000307289 CEP162Q5TB80 1403 aa25.67■■□□□ 1.7
SYVN1-202ENST00000307289 TNIKQ9UKE5 1360 aa25.57■■□□□ 1.68
SYVN1-202ENST00000307289 EEA1Q15075 1411 aa25.53■■□□□ 1.68
SYVN1-202ENST00000307289 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.52■■□□□ 1.68
SYVN1-202ENST00000307289 RANGAP1P46060 587 aaPredicted RBP25.48■■□□□ 1.67
SYVN1-202ENST00000307289 GOLGA3Q08378 1498 aa25.46■■□□□ 1.67
SYVN1-202ENST00000307289 ZEB1P37275 1124 aaPredicted RBP25.45■■□□□ 1.66
SYVN1-202ENST00000307289 NCAPD3P42695 1498 aa25.38■■□□□ 1.65
SYVN1-202ENST00000307289 RAPGEF2Q9Y4G8 1499 aa25.34■■□□□ 1.65
SYVN1-202ENST00000307289 CEP164Q9UPV0 1460 aa25.33■■□□□ 1.65
SYVN1-202ENST00000307289 CCER1Q8TC90 406 aaPredicted RBP25.31■■□□□ 1.64
SYVN1-202ENST00000307289 HMGXB3Q12766 1538 aa25.28■■□□□ 1.64
SYVN1-202ENST00000307289 TOP2BQ02880 1626 aa25.28■■□□□ 1.64
SYVN1-202ENST00000307289 KIF21BO75037 1637 aa25.25■■□□□ 1.63
SYVN1-202ENST00000307289 CLIP1P30622 1438 aa25.24■■□□□ 1.63
SYVN1-202ENST00000307289 CUX1P39880 1505 aa25.19■■□□□ 1.62
SYVN1-202ENST00000307289 BIVM-ERCC5R4GMW8 1640 aa25.15■■□□□ 1.62
SYVN1-202ENST00000307289 CFTRP13569 1480 aa25.14■■□□□ 1.61
SYVN1-202ENST00000307289 HNRNPUL2Q1KMD3 747 aaKnown RBP25.06■■□□□ 1.6
SYVN1-202ENST00000307289 VPS8Q8N3P4 1428 aa25.04■■□□□ 1.6
SYVN1-202ENST00000307289 PRXQ9BXM0 1461 aa25.02■■□□□ 1.6
SYVN1-202ENST00000307289 CC2D2AQ9P2K1 1620 aa24.95■■□□□ 1.58
SYVN1-202ENST00000307289 APLP2Q06481 763 aa24.95■■□□□ 1.58
SYVN1-202ENST00000307289 KIF27Q86VH2 1401 aa24.95■■□□□ 1.58
SYVN1-202ENST00000307289 CADPSQ9ULU8 1353 aa24.94■■□□□ 1.58
SYVN1-202ENST00000307289 ARAP1Q96P48 1450 aa24.87■■□□□ 1.57
SYVN1-202ENST00000307289 ERICH3Q5RHP9 1530 aa24.87■■□□□ 1.57
SYVN1-202ENST00000307289 KANK4Q5T7N3 995 aaPredicted RBP24.86■■□□□ 1.57
SYVN1-202ENST00000307289 CUX2O14529 1486 aa24.85■■□□□ 1.57
SYVN1-202ENST00000307289 IGF1RP08069 1367 aa24.8■■□□□ 1.56
SYVN1-202ENST00000307289 FGD5Q6ZNL6 1462 aa24.78■■□□□ 1.56
SYVN1-202ENST00000307289 DNAJC5BQ9UF47 199 aa24.76■■□□□ 1.55
SYVN1-202ENST00000307289 NESP48681 1621 aa24.76■■□□□ 1.55
SYVN1-202ENST00000307289 PRDM2Q13029 1718 aa24.75■■□□□ 1.55
SYVN1-202ENST00000307289 FANCD2Q9BXW9 1451 aa24.71■■□□□ 1.55
SYVN1-202ENST00000307289 ARHGAP35Q9NRY4 1499 aa24.71■■□□□ 1.55
SYVN1-202ENST00000307289 CARMIL1Q5VZK9 1371 aa24.66■■□□□ 1.54
SYVN1-202ENST00000307289 RAD54L2Q9Y4B4 1467 aa24.66■■□□□ 1.54
SYVN1-202ENST00000307289 DIEXFQ68CQ4 756 aaKnown RBP24.64■■□□□ 1.54
SYVN1-202ENST00000307289 P3H3Q8IVL6 736 aa24.62■■□□□ 1.53
SYVN1-202ENST00000307289 ITGAEP38570 1179 aa24.55■■□□□ 1.52
SYVN1-202ENST00000307289 POLA1P09884 1462 aaPredicted RBP24.52■■□□□ 1.52
SYVN1-202ENST00000307289 TOPBP1Q92547 1522 aa24.52■■□□□ 1.52
SYVN1-202ENST00000307289 ZNF316A6NFI3 1004 aaPredicted RBP24.48■■□□□ 1.51
SYVN1-202ENST00000307289 ATP1B4Q9UN42 357 aaPredicted RBP24.47■■□□□ 1.51
SYVN1-202ENST00000307289 SCAF1Q9H7N4 1312 aaKnown RBP24.46■■□□□ 1.51
SYVN1-202ENST00000307289 DNMBPQ6XZF7 1577 aa24.46■■□□□ 1.51
SYVN1-202ENST00000307289 URB2Q14146 1524 aaKnown RBP24.41■■□□□ 1.5
SYVN1-202ENST00000307289 RRBP1Q9P2E9 1410 aaKnown RBP24.4■■□□□ 1.5
SYVN1-202ENST00000307289 ABCA10Q8WWZ4 1543 aa24.4■■□□□ 1.5
SYVN1-202ENST00000307289 TDRD9Q8NDG6 1382 aaKnown RBP24.39■■□□□ 1.5
SYVN1-202ENST00000307289 DHX57Q6P158 1386 aaKnown RBP24.39■■□□□ 1.5
SYVN1-202ENST00000307289 CCNB3Q8WWL7 1395 aa24.38■■□□□ 1.49
SYVN1-202ENST00000307289 FHOD3Q2V2M9 1422 aa24.37■■□□□ 1.49
SYVN1-202ENST00000307289 NEUROD1Q13562 356 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms