RNA–Protein interactions for RNA: ENST00000371217.9

TCTN3-203, Transcript of tectonic family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TCTN3, Length 2,514 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-203ENST00000371217 NISCHQ9Y2I1 1504 aa19.98■□□□□ 0.79
TCTN3-203ENST00000371217 SHROOM4Q9ULL8 1493 aa17.28■□□□□ 0.36
TCTN3-203ENST00000371217 AEBP2Q6ZN18 517 aaPredicted RBP17.17■□□□□ 0.34
TCTN3-203ENST00000371217 SUPT5HO00267 1087 aaKnown RBP17.04■□□□□ 0.32
TCTN3-203ENST00000371217 CHIC1Q5VXU3 224 aa16.98■□□□□ 0.31
TCTN3-203ENST00000371217 ZCCHC6Q5VYS8 1495 aaKnown RBP16.9■□□□□ 0.3
TCTN3-203ENST00000371217 CCDC180Q9P1Z9 1646 aa16.81■□□□□ 0.28
TCTN3-203ENST00000371217 DCAF8L2P0C7V8 631 aa16.73■□□□□ 0.27
TCTN3-203ENST00000371217 MYO15BQ96JP2 1530 aa16.5■□□□□ 0.23
TCTN3-203ENST00000371217 HRCP23327 699 aa16.34■□□□□ 0.21
TCTN3-203ENST00000371217 DCAF1Q9Y4B6 1507 aa16.33■□□□□ 0.2
TCTN3-203ENST00000371217 PCGF6Q9BYE7 350 aa16.28■□□□□ 0.2
TCTN3-203ENST00000371217 LOC105371045A0A1W2PR82 267 aa16.16■□□□□ 0.18
TCTN3-203ENST00000371217 PPARGC1BQ86YN6 1023 aaKnown RBP16.01■□□□□ 0.15
TCTN3-203ENST00000371217 ABCC9O60706 1549 aa15.95■□□□□ 0.14
TCTN3-203ENST00000371217 RSF1Q96T23 1441 aaPredicted RBP15.9■□□□□ 0.14
TCTN3-203ENST00000371217 TRIM26Q12899 539 aaPredicted RBP15.9■□□□□ 0.14
TCTN3-203ENST00000371217 SCRIBQ14160 1630 aa15.89■□□□□ 0.13
TCTN3-203ENST00000371217 TRIM41Q8WV44 630 aa15.85■□□□□ 0.13
TCTN3-203ENST00000371217 FAM9AQ8IZU1 332 aaPredicted RBP15.76■□□□□ 0.11
TCTN3-203ENST00000371217 RB1CC1Q8TDY2 1594 aa15.71■□□□□ 0.11
TCTN3-203ENST00000371217 EHMT2Q96KQ7 1210 aa15.66■□□□□ 0.1
TCTN3-203ENST00000371217 CECR2Q9BXF3 1484 aa15.62■□□□□ 0.09
TCTN3-203ENST00000371217 ZEB1P37275 1124 aaPredicted RBP15.61■□□□□ 0.09
TCTN3-203ENST00000371217 NACADO15069 1562 aa15.57■□□□□ 0.08
TCTN3-203ENST00000371217 MROH2BQ7Z745 1585 aa15.56■□□□□ 0.08
TCTN3-203ENST00000371217 WIZO95785 1651 aa15.46■□□□□ 0.07
TCTN3-203ENST00000371217 BAZ1AQ9NRL2 1556 aaPredicted RBP15.34■□□□□ 0.05
TCTN3-203ENST00000371217 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.26■□□□□ 0.03
TCTN3-203ENST00000371217 CCER1Q8TC90 406 aaPredicted RBP15.24■□□□□ 0.03
TCTN3-203ENST00000371217 EIF4G1Q04637 1599 aaKnown RBP15.24■□□□□ 0.03
TCTN3-203ENST00000371217 CCDC88BA6NC98 1476 aa15.2■□□□□ 0.02
TCTN3-203ENST00000371217 TOP2AP11388 1531 aaKnown RBP15.2■□□□□ 0.02
TCTN3-203ENST00000371217 ABCC8Q09428 1581 aa15.2■□□□□ 0.02
TCTN3-203ENST00000371217 TTBK1Q5TCY1 1321 aaPredicted RBP15.18■□□□□ 0.02
TCTN3-203ENST00000371217 SMARCA4P51532 1647 aa15.15■□□□□ 0.02
TCTN3-203ENST00000371217 SCAF1Q9H7N4 1312 aaKnown RBP15.15■□□□□ 0.02
TCTN3-203ENST00000371217 SOGA1O94964 1423 aa15.13■□□□□ 0.01
TCTN3-203ENST00000371217 SMARCA2P51531 1590 aa15.12■□□□□ 0.01
TCTN3-203ENST00000371217 CEP162Q5TB80 1403 aa15.11■□□□□ 0.01
TCTN3-203ENST00000371217 WRNQ14191 1432 aaPredicted RBP eCLIP15.1■□□□□ 0.01
TCTN3-203ENST00000371217 UBTFP17480 764 aaKnown RBP15.09■□□□□ 0.01
TCTN3-203ENST00000371217 CSRNP3Q8WYN3 585 aa15.09■□□□□ 0.01
TCTN3-203ENST00000371217 TNIKQ9UKE5 1360 aa15.08■□□□□ 0
TCTN3-203ENST00000371217 PABPN1Q86U42 306 aaKnown RBP eCLIP15.04■□□□□ -0
TCTN3-203ENST00000371217 RUSC2Q8N2Y8 1516 aa15.03■□□□□ -0
TCTN3-203ENST00000371217 EEA1Q15075 1411 aa15.03■□□□□ -0
TCTN3-203ENST00000371217 DIEXFQ68CQ4 756 aaKnown RBP15.01□□□□□ -0.01
TCTN3-203ENST00000371217 UNC13AQ9UPW8 1703 aa15□□□□□ -0.01
TCTN3-203ENST00000371217 PELP1Q8IZL8 1130 aaKnown RBP14.99□□□□□ -0.01
TCTN3-203ENST00000371217 PHF23Q9BUL5 403 aaPredicted RBP14.99□□□□□ -0.01
TCTN3-203ENST00000371217 ACIN1Q9UKV3 1341 aaKnown RBP14.97□□□□□ -0.01
TCTN3-203ENST00000371217 GOLGA3Q08378 1498 aa14.95□□□□□ -0.02
TCTN3-203ENST00000371217 NEUROD1Q13562 356 aa14.94□□□□□ -0.02
TCTN3-203ENST00000371217 CENPBP07199 599 aaPredicted RBP14.88□□□□□ -0.03
TCTN3-203ENST00000371217 BICRAQ9NZM4 1560 aa14.87□□□□□ -0.03
TCTN3-203ENST00000371217 ZNF316A6NFI3 1004 aaPredicted RBP14.85□□□□□ -0.03
TCTN3-203ENST00000371217 HNRNPUL2Q1KMD3 747 aaKnown RBP14.85□□□□□ -0.03
TCTN3-203ENST00000371217 CEP164Q9UPV0 1460 aa14.84□□□□□ -0.03
TCTN3-203ENST00000371217 PEG3Q9GZU2 1588 aa14.82□□□□□ -0.04
TCTN3-203ENST00000371217 GTF3C3Q9Y5Q9 886 aa14.82□□□□□ -0.04
TCTN3-203ENST00000371217 CLIP1P30622 1438 aa14.81□□□□□ -0.04
TCTN3-203ENST00000371217 SYNJ1O43426 1573 aa14.81□□□□□ -0.04
TCTN3-203ENST00000371217 RANGAP1P46060 587 aaPredicted RBP14.8□□□□□ -0.04
TCTN3-203ENST00000371217 APLP2Q06481 763 aa14.8□□□□□ -0.04
TCTN3-203ENST00000371217 ATAD2BQ9ULI0 1458 aa14.77□□□□□ -0.04
TCTN3-203ENST00000371217 KIF21BO75037 1637 aa14.77□□□□□ -0.05
TCTN3-203ENST00000371217 BAZ1BQ9UIG0 1483 aaKnown RBP14.75□□□□□ -0.05
TCTN3-203ENST00000371217 VPS8Q8N3P4 1428 aa14.75□□□□□ -0.05
TCTN3-203ENST00000371217 RAPGEF2Q9Y4G8 1499 aa14.73□□□□□ -0.05
TCTN3-203ENST00000371217 YTHDC1Q96MU7 727 aaKnown RBP14.7□□□□□ -0.06
TCTN3-203ENST00000371217 MIER1Q8N108 512 aa14.67□□□□□ -0.06
TCTN3-203ENST00000371217 TOP2BQ02880 1626 aa14.6□□□□□ -0.07
TCTN3-203ENST00000371217 KANK4Q5T7N3 995 aaPredicted RBP14.55□□□□□ -0.08
TCTN3-203ENST00000371217 PRXQ9BXM0 1461 aa14.54□□□□□ -0.08
TCTN3-203ENST00000371217 ERICH3Q5RHP9 1530 aa14.51□□□□□ -0.09
TCTN3-203ENST00000371217 ARAP1Q96P48 1450 aa14.51□□□□□ -0.09
TCTN3-203ENST00000371217 BIVM-ERCC5R4GMW8 1640 aa14.51□□□□□ -0.09
TCTN3-203ENST00000371217 CLSPNQ9HAW4 1339 aa14.51□□□□□ -0.09
TCTN3-203ENST00000371217 DHX57Q6P158 1386 aaKnown RBP14.5□□□□□ -0.09
TCTN3-203ENST00000371217 SENP3Q9H4L4 574 aaPredicted RBP14.48□□□□□ -0.09
TCTN3-203ENST00000371217 KIF27Q86VH2 1401 aa14.48□□□□□ -0.09
TCTN3-203ENST00000371217 CUX1P39880 1505 aa14.46□□□□□ -0.09
TCTN3-203ENST00000371217 NCAPD3P42695 1498 aa14.45□□□□□ -0.1
TCTN3-203ENST00000371217 ITGAEP38570 1179 aa14.42□□□□□ -0.1
TCTN3-203ENST00000371217 HMGXB3Q12766 1538 aa14.41□□□□□ -0.1
TCTN3-203ENST00000371217 RRBP1Q9P2E9 1410 aaKnown RBP14.41□□□□□ -0.1
TCTN3-203ENST00000371217 CCNB3Q8WWL7 1395 aa14.39□□□□□ -0.11
TCTN3-203ENST00000371217 CFTRP13569 1480 aa14.38□□□□□ -0.11
TCTN3-203ENST00000371217 ARHGAP35Q9NRY4 1499 aa14.38□□□□□ -0.11
TCTN3-203ENST00000371217 IGF1RP08069 1367 aa14.32□□□□□ -0.12
TCTN3-203ENST00000371217 CUX2O14529 1486 aa14.32□□□□□ -0.12
TCTN3-203ENST00000371217 RAB3GAP2Q9H2M9 1393 aa14.28□□□□□ -0.12
TCTN3-203ENST00000371217 CARMIL1Q5VZK9 1371 aa14.27□□□□□ -0.12
TCTN3-203ENST00000371217 MYT1Q01538 1121 aa14.25□□□□□ -0.13
TCTN3-203ENST00000371217 ATP1B4Q9UN42 357 aaPredicted RBP14.24□□□□□ -0.13
TCTN3-203ENST00000371217 FAM50AQ14320 339 aaKnown RBP14.23□□□□□ -0.13
TCTN3-203ENST00000371217 P3H3Q8IVL6 736 aa14.23□□□□□ -0.13
TCTN3-203ENST00000371217 CADPSQ9ULU8 1353 aa14.23□□□□□ -0.13
TCTN3-203ENST00000371217 SUPT16HQ9Y5B9 1047 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms