RNA–Protein interactions for RNA: ENST00000449943.5

SYVN1-204, Transcript of synoviolin 1, humanhuman

TSL 2

Gene SYVN1, Length 4,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-204ENST00000449943 NISCHQ9Y2I1 1504 aa22.87■■□□□ 1.25
SYVN1-204ENST00000449943 SHROOM4Q9ULL8 1493 aa19.93■□□□□ 0.78
SYVN1-204ENST00000449943 SUPT5HO00267 1087 aaKnown RBP19.61■□□□□ 0.73
SYVN1-204ENST00000449943 DCAF8L2P0C7V8 631 aa19.41■□□□□ 0.7
SYVN1-204ENST00000449943 ZCCHC6Q5VYS8 1495 aaKnown RBP19.35■□□□□ 0.69
SYVN1-204ENST00000449943 CCDC180Q9P1Z9 1646 aa19.24■□□□□ 0.67
SYVN1-204ENST00000449943 CHIC1Q5VXU3 224 aa18.97■□□□□ 0.63
SYVN1-204ENST00000449943 MYO15BQ96JP2 1530 aa18.92■□□□□ 0.62
SYVN1-204ENST00000449943 PCGF6Q9BYE7 350 aa18.66■□□□□ 0.58
SYVN1-204ENST00000449943 HRCP23327 699 aa18.62■□□□□ 0.57
SYVN1-204ENST00000449943 DCAF1Q9Y4B6 1507 aa18.62■□□□□ 0.57
SYVN1-204ENST00000449943 LOC105371045A0A1W2PR82 267 aa18.53■□□□□ 0.56
SYVN1-204ENST00000449943 PPARGC1BQ86YN6 1023 aaKnown RBP18.36■□□□□ 0.53
SYVN1-204ENST00000449943 SCRIBQ14160 1630 aa18.31■□□□□ 0.52
SYVN1-204ENST00000449943 ABCC9O60706 1549 aa18.28■□□□□ 0.52
SYVN1-204ENST00000449943 RSF1Q96T23 1441 aaPredicted RBP18.21■□□□□ 0.51
SYVN1-204ENST00000449943 FAM9AQ8IZU1 332 aaPredicted RBP18.17■□□□□ 0.5
SYVN1-204ENST00000449943 TRIM41Q8WV44 630 aa18.17■□□□□ 0.5
SYVN1-204ENST00000449943 TRIM26Q12899 539 aaPredicted RBP18.14■□□□□ 0.49
SYVN1-204ENST00000449943 EHMT2Q96KQ7 1210 aa18.14■□□□□ 0.49
SYVN1-204ENST00000449943 RB1CC1Q8TDY2 1594 aa18.06■□□□□ 0.48
SYVN1-204ENST00000449943 CECR2Q9BXF3 1484 aa17.93■□□□□ 0.46
SYVN1-204ENST00000449943 MROH2BQ7Z745 1585 aa17.85■□□□□ 0.45
SYVN1-204ENST00000449943 NACADO15069 1562 aa17.83■□□□□ 0.44
SYVN1-204ENST00000449943 ZEB1P37275 1124 aaPredicted RBP17.76■□□□□ 0.43
SYVN1-204ENST00000449943 WIZO95785 1651 aa17.75■□□□□ 0.43
SYVN1-204ENST00000449943 BAZ1AQ9NRL2 1556 aaPredicted RBP17.57■□□□□ 0.4
SYVN1-204ENST00000449943 TTBK1Q5TCY1 1321 aaPredicted RBP17.57■□□□□ 0.4
SYVN1-204ENST00000449943 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.52■□□□□ 0.39
SYVN1-204ENST00000449943 ABCC8Q09428 1581 aa17.48■□□□□ 0.39
SYVN1-204ENST00000449943 CCER1Q8TC90 406 aaPredicted RBP17.47■□□□□ 0.39
SYVN1-204ENST00000449943 EIF4G1Q04637 1599 aaKnown RBP17.44■□□□□ 0.38
SYVN1-204ENST00000449943 CCDC88BA6NC98 1476 aa17.43■□□□□ 0.38
SYVN1-204ENST00000449943 TOP2AP11388 1531 aaKnown RBP17.42■□□□□ 0.38
SYVN1-204ENST00000449943 SMARCA4P51532 1647 aa17.38■□□□□ 0.37
SYVN1-204ENST00000449943 PABPN1Q86U42 306 aaKnown RBP eCLIP17.37■□□□□ 0.37
SYVN1-204ENST00000449943 SOGA1O94964 1423 aa17.35■□□□□ 0.37
SYVN1-204ENST00000449943 UBTFP17480 764 aaKnown RBP17.35■□□□□ 0.37
SYVN1-204ENST00000449943 SMARCA2P51531 1590 aa17.34■□□□□ 0.37
SYVN1-204ENST00000449943 CEP162Q5TB80 1403 aa17.32■□□□□ 0.36
SYVN1-204ENST00000449943 SCAF1Q9H7N4 1312 aaKnown RBP17.29■□□□□ 0.36
SYVN1-204ENST00000449943 CSRNP3Q8WYN3 585 aa17.27■□□□□ 0.36
SYVN1-204ENST00000449943 RUSC2Q8N2Y8 1516 aa17.26■□□□□ 0.35
SYVN1-204ENST00000449943 UNC13AQ9UPW8 1703 aa17.24■□□□□ 0.35
SYVN1-204ENST00000449943 TNIKQ9UKE5 1360 aa17.22■□□□□ 0.35
SYVN1-204ENST00000449943 WRNQ14191 1432 aaPredicted RBP eCLIP17.21■□□□□ 0.35
SYVN1-204ENST00000449943 DIEXFQ68CQ4 756 aaKnown RBP17.15■□□□□ 0.34
SYVN1-204ENST00000449943 EEA1Q15075 1411 aa17.14■□□□□ 0.33
SYVN1-204ENST00000449943 RANGAP1P46060 587 aaPredicted RBP17.12■□□□□ 0.33
SYVN1-204ENST00000449943 GOLGA3Q08378 1498 aa17.12■□□□□ 0.33
SYVN1-204ENST00000449943 HNRNPUL2Q1KMD3 747 aaKnown RBP17.07■□□□□ 0.32
SYVN1-204ENST00000449943 NEUROD1Q13562 356 aa17.07■□□□□ 0.32
SYVN1-204ENST00000449943 APLP2Q06481 763 aa17.06■□□□□ 0.32
SYVN1-204ENST00000449943 BICRAQ9NZM4 1560 aa17.06■□□□□ 0.32
SYVN1-204ENST00000449943 ACIN1Q9UKV3 1341 aaKnown RBP17.06■□□□□ 0.32
SYVN1-204ENST00000449943 SYNJ1O43426 1573 aa17■□□□□ 0.31
SYVN1-204ENST00000449943 CEP164Q9UPV0 1460 aa16.99■□□□□ 0.31
SYVN1-204ENST00000449943 CLIP1P30622 1438 aa16.98■□□□□ 0.31
SYVN1-204ENST00000449943 CENPBP07199 599 aaPredicted RBP16.97■□□□□ 0.31
SYVN1-204ENST00000449943 PELP1Q8IZL8 1130 aaKnown RBP16.97■□□□□ 0.31
SYVN1-204ENST00000449943 BAZ1BQ9UIG0 1483 aaKnown RBP16.95■□□□□ 0.3
SYVN1-204ENST00000449943 ZNF316A6NFI3 1004 aaPredicted RBP16.95■□□□□ 0.3
SYVN1-204ENST00000449943 ATAD2BQ9ULI0 1458 aa16.94■□□□□ 0.3
SYVN1-204ENST00000449943 GTF3C3Q9Y5Q9 886 aa16.93■□□□□ 0.3
SYVN1-204ENST00000449943 PEG3Q9GZU2 1588 aa16.93■□□□□ 0.3
SYVN1-204ENST00000449943 YTHDC1Q96MU7 727 aaKnown RBP16.91■□□□□ 0.3
SYVN1-204ENST00000449943 RAPGEF2Q9Y4G8 1499 aa16.9■□□□□ 0.3
SYVN1-204ENST00000449943 KIF21BO75037 1637 aa16.88■□□□□ 0.29
SYVN1-204ENST00000449943 VPS8Q8N3P4 1428 aa16.87■□□□□ 0.29
SYVN1-204ENST00000449943 MIER1Q8N108 512 aa16.77■□□□□ 0.28
SYVN1-204ENST00000449943 TOP2BQ02880 1626 aa16.72■□□□□ 0.27
SYVN1-204ENST00000449943 KANK4Q5T7N3 995 aaPredicted RBP16.68■□□□□ 0.26
SYVN1-204ENST00000449943 ITGAEP38570 1179 aa16.63■□□□□ 0.25
SYVN1-204ENST00000449943 ARAP1Q96P48 1450 aa16.63■□□□□ 0.25
SYVN1-204ENST00000449943 PRXQ9BXM0 1461 aa16.62■□□□□ 0.25
SYVN1-204ENST00000449943 BIVM-ERCC5R4GMW8 1640 aa16.61■□□□□ 0.25
SYVN1-204ENST00000449943 CUX1P39880 1505 aa16.59■□□□□ 0.25
SYVN1-204ENST00000449943 KIF27Q86VH2 1401 aa16.59■□□□□ 0.25
SYVN1-204ENST00000449943 ERICH3Q5RHP9 1530 aa16.59■□□□□ 0.25
SYVN1-204ENST00000449943 DHX57Q6P158 1386 aaKnown RBP16.58■□□□□ 0.24
SYVN1-204ENST00000449943 NCAPD3P42695 1498 aa16.54■□□□□ 0.24
SYVN1-204ENST00000449943 ATP1B4Q9UN42 357 aaPredicted RBP16.52■□□□□ 0.24
SYVN1-204ENST00000449943 HMGXB3Q12766 1538 aa16.5■□□□□ 0.23
SYVN1-204ENST00000449943 CLSPNQ9HAW4 1339 aa16.49■□□□□ 0.23
SYVN1-204ENST00000449943 ARHGAP35Q9NRY4 1499 aa16.47■□□□□ 0.23
SYVN1-204ENST00000449943 CFTRP13569 1480 aa16.47■□□□□ 0.23
SYVN1-204ENST00000449943 CCNB3Q8WWL7 1395 aa16.47■□□□□ 0.23
SYVN1-204ENST00000449943 RRBP1Q9P2E9 1410 aaKnown RBP16.45■□□□□ 0.22
SYVN1-204ENST00000449943 CUX2O14529 1486 aa16.45■□□□□ 0.22
SYVN1-204ENST00000449943 P3H3Q8IVL6 736 aa16.41■□□□□ 0.22
SYVN1-204ENST00000449943 IGF1RP08069 1367 aa16.39■□□□□ 0.21
SYVN1-204ENST00000449943 FAM50AQ14320 339 aaKnown RBP16.38■□□□□ 0.21
SYVN1-204ENST00000449943 CARMIL1Q5VZK9 1371 aa16.36■□□□□ 0.21
SYVN1-204ENST00000449943 RAB3GAP2Q9H2M9 1393 aa16.36■□□□□ 0.21
SYVN1-204ENST00000449943 FGD5Q6ZNL6 1462 aa16.31■□□□□ 0.2
SYVN1-204ENST00000449943 CADPSQ9ULU8 1353 aa16.31■□□□□ 0.2
SYVN1-204ENST00000449943 TIAM1Q13009 1591 aa16.28■□□□□ 0.2
SYVN1-204ENST00000449943 PHLDB1Q86UU1 1377 aa16.28■□□□□ 0.2
SYVN1-204ENST00000449943 SIN3AQ96ST3 1273 aa16.27■□□□□ 0.2
SYVN1-204ENST00000449943 SETD5Q9C0A6 1442 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms