RNA–Protein interactions for RNA: ENST00000378011.8

PGAP3-203, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 2 BASIC

Gene PGAP3, Length 2,533 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-203ENST00000378011 NISCHQ9Y2I1 1504 aa37.73■■■■□ 3.63
PGAP3-203ENST00000378011 CCDC180Q9P1Z9 1646 aa32.57■■■□□ 2.8
PGAP3-203ENST00000378011 ZCCHC6Q5VYS8 1495 aaKnown RBP31.76■■■□□ 2.67
PGAP3-203ENST00000378011 SHROOM4Q9ULL8 1493 aa31.41■■■□□ 2.62
PGAP3-203ENST00000378011 DCAF8L2P0C7V8 631 aa31.34■■■□□ 2.61
PGAP3-203ENST00000378011 DCAF1Q9Y4B6 1507 aa31.03■■■□□ 2.56
PGAP3-203ENST00000378011 ABCC9O60706 1549 aa30.71■■■□□ 2.51
PGAP3-203ENST00000378011 MYO15BQ96JP2 1530 aa30.46■■■□□ 2.47
PGAP3-203ENST00000378011 SUPT5HO00267 1087 aaKnown RBP30.41■■■□□ 2.46
PGAP3-203ENST00000378011 SCRIBQ14160 1630 aa30.27■■■□□ 2.44
PGAP3-203ENST00000378011 NACADO15069 1562 aa30.25■■■□□ 2.43
PGAP3-203ENST00000378011 RB1CC1Q8TDY2 1594 aa29.93■■■□□ 2.38
PGAP3-203ENST00000378011 UNC13AQ9UPW8 1703 aa29.51■■■□□ 2.32
PGAP3-203ENST00000378011 RSF1Q96T23 1441 aaPredicted RBP29.5■■■□□ 2.31
PGAP3-203ENST00000378011 CECR2Q9BXF3 1484 aa29.43■■■□□ 2.3
PGAP3-203ENST00000378011 MROH2BQ7Z745 1585 aa29.27■■■□□ 2.28
PGAP3-203ENST00000378011 CHIC1Q5VXU3 224 aa29.22■■■□□ 2.27
PGAP3-203ENST00000378011 PABPN1Q86U42 306 aaKnown RBP eCLIP29.14■■■□□ 2.25
PGAP3-203ENST00000378011 BICRAQ9NZM4 1560 aa29.13■■■□□ 2.25
PGAP3-203ENST00000378011 WIZO95785 1651 aa29.08■■■□□ 2.25
PGAP3-203ENST00000378011 BAZ1AQ9NRL2 1556 aaPredicted RBP29.06■■■□□ 2.24
PGAP3-203ENST00000378011 SMARCA4P51532 1647 aa28.93■■■□□ 2.22
PGAP3-203ENST00000378011 TOP2AP11388 1531 aaKnown RBP28.64■■■□□ 2.18
PGAP3-203ENST00000378011 CCDC88BA6NC98 1476 aa28.45■■■□□ 2.15
PGAP3-203ENST00000378011 SMARCA2P51531 1590 aa28.45■■■□□ 2.14
PGAP3-203ENST00000378011 PEG3Q9GZU2 1588 aa28.45■■■□□ 2.14
PGAP3-203ENST00000378011 TRIM41Q8WV44 630 aa28.43■■■□□ 2.14
PGAP3-203ENST00000378011 EIF4G1Q04637 1599 aaKnown RBP28.36■■■□□ 2.13
PGAP3-203ENST00000378011 ATAD2BQ9ULI0 1458 aa28.35■■■□□ 2.13
PGAP3-203ENST00000378011 LOC105371045A0A1W2PR82 267 aa28.27■■■□□ 2.12
PGAP3-203ENST00000378011 BAZ1BQ9UIG0 1483 aaKnown RBP28.22■■■□□ 2.11
PGAP3-203ENST00000378011 FAM9AQ8IZU1 332 aaPredicted RBP28.11■■■□□ 2.09
PGAP3-203ENST00000378011 ABCC8Q09428 1581 aa28.1■■■□□ 2.09
PGAP3-203ENST00000378011 NCAPD3P42695 1498 aa27.97■■■□□ 2.07
PGAP3-203ENST00000378011 PELP1Q8IZL8 1130 aaKnown RBP27.94■■■□□ 2.06
PGAP3-203ENST00000378011 HMGXB3Q12766 1538 aa27.93■■■□□ 2.06
PGAP3-203ENST00000378011 EHMT2Q96KQ7 1210 aa27.84■■■□□ 2.05
PGAP3-203ENST00000378011 WRNQ14191 1432 aaPredicted RBP eCLIP27.74■■■□□ 2.03
PGAP3-203ENST00000378011 CC2D2AQ9P2K1 1620 aa27.71■■■□□ 2.03
PGAP3-203ENST00000378011 SYNJ1O43426 1573 aa27.66■■■□□ 2.02
PGAP3-203ENST00000378011 SOGA1O94964 1423 aa27.65■■■□□ 2.02
PGAP3-203ENST00000378011 HRCP23327 699 aa27.6■■■□□ 2.01
PGAP3-203ENST00000378011 RUSC2Q8N2Y8 1516 aa27.56■■■□□ 2
PGAP3-203ENST00000378011 CFTRP13569 1480 aa27.5■■□□□ 1.99
PGAP3-203ENST00000378011 TOP2BQ02880 1626 aa27.42■■□□□ 1.98
PGAP3-203ENST00000378011 EEA1Q15075 1411 aa27.42■■□□□ 1.98
PGAP3-203ENST00000378011 CSRNP3Q8WYN3 585 aa27.41■■□□□ 1.98
PGAP3-203ENST00000378011 PCGF6Q9BYE7 350 aa27.41■■□□□ 1.98
PGAP3-203ENST00000378011 BIVM-ERCC5R4GMW8 1640 aa27.36■■□□□ 1.97
PGAP3-203ENST00000378011 PRDM2Q13029 1718 aa27.35■■□□□ 1.97
PGAP3-203ENST00000378011 CADPSQ9ULU8 1353 aa27.34■■□□□ 1.97
PGAP3-203ENST00000378011 CUX1P39880 1505 aa27.31■■□□□ 1.96
PGAP3-203ENST00000378011 UBTFP17480 764 aaKnown RBP27.19■■□□□ 1.94
PGAP3-203ENST00000378011 GOLGA3Q08378 1498 aa27.18■■□□□ 1.94
PGAP3-203ENST00000378011 TNIKQ9UKE5 1360 aa27.17■■□□□ 1.94
PGAP3-203ENST00000378011 DNAJC5BQ9UF47 199 aa27.14■■□□□ 1.94
PGAP3-203ENST00000378011 CEP162Q5TB80 1403 aa27.14■■□□□ 1.93
PGAP3-203ENST00000378011 MYT1Q01538 1121 aa27.13■■□□□ 1.93
PGAP3-203ENST00000378011 TRIM26Q12899 539 aaPredicted RBP27.13■■□□□ 1.93
PGAP3-203ENST00000378011 NESP48681 1621 aa27.12■■□□□ 1.93
PGAP3-203ENST00000378011 CEP164Q9UPV0 1460 aa27.12■■□□□ 1.93
PGAP3-203ENST00000378011 KIF21BO75037 1637 aa27.12■■□□□ 1.93
PGAP3-203ENST00000378011 FANCD2Q9BXW9 1451 aa27.07■■□□□ 1.92
PGAP3-203ENST00000378011 RAPGEF2Q9Y4G8 1499 aa27.03■■□□□ 1.92
PGAP3-203ENST00000378011 PPARGC1BQ86YN6 1023 aaKnown RBP27.01■■□□□ 1.92
PGAP3-203ENST00000378011 KIF27Q86VH2 1401 aa26.96■■□□□ 1.91
PGAP3-203ENST00000378011 FGD5Q6ZNL6 1462 aa26.94■■□□□ 1.9
PGAP3-203ENST00000378011 LAMC3Q9Y6N6 1575 aa26.93■■□□□ 1.9
PGAP3-203ENST00000378011 PRXQ9BXM0 1461 aa26.89■■□□□ 1.9
PGAP3-203ENST00000378011 CUX2O14529 1486 aa26.87■■□□□ 1.89
PGAP3-203ENST00000378011 DNMBPQ6XZF7 1577 aa26.84■■□□□ 1.89
PGAP3-203ENST00000378011 ERICH3Q5RHP9 1530 aa26.82■■□□□ 1.88
PGAP3-203ENST00000378011 TOPBP1Q92547 1522 aa26.82■■□□□ 1.88
PGAP3-203ENST00000378011 CLIP1P30622 1438 aa26.81■■□□□ 1.88
PGAP3-203ENST00000378011 RANGAP1P46060 587 aaPredicted RBP26.81■■□□□ 1.88
PGAP3-203ENST00000378011 RAD54L2Q9Y4B4 1467 aa26.75■■□□□ 1.87
PGAP3-203ENST00000378011 POLA1P09884 1462 aaPredicted RBP26.74■■□□□ 1.87
PGAP3-203ENST00000378011 PDS5BQ9NTI5 1447 aa26.74■■□□□ 1.87
PGAP3-203ENST00000378011 URB2Q14146 1524 aaKnown RBP26.73■■□□□ 1.87
PGAP3-203ENST00000378011 IGF1RP08069 1367 aa26.73■■□□□ 1.87
PGAP3-203ENST00000378011 TTBK1Q5TCY1 1321 aaPredicted RBP26.73■■□□□ 1.87
PGAP3-203ENST00000378011 KIF21AQ7Z4S6 1674 aa26.72■■□□□ 1.87
PGAP3-203ENST00000378011 ABCA10Q8WWZ4 1543 aa26.63■■□□□ 1.85
PGAP3-203ENST00000378011 VPS8Q8N3P4 1428 aa26.6■■□□□ 1.85
PGAP3-203ENST00000378011 CARMIL1Q5VZK9 1371 aa26.6■■□□□ 1.85
PGAP3-203ENST00000378011 SCAF1Q9H7N4 1312 aaKnown RBP26.55■■□□□ 1.84
PGAP3-203ENST00000378011 WDR97A6NE52 1622 aa26.52■■□□□ 1.84
PGAP3-203ENST00000378011 ARAP1Q96P48 1450 aa26.5■■□□□ 1.83
PGAP3-203ENST00000378011 TDRD9Q8NDG6 1382 aaKnown RBP26.46■■□□□ 1.83
PGAP3-203ENST00000378011 ARHGAP35Q9NRY4 1499 aa26.42■■□□□ 1.82
PGAP3-203ENST00000378011 ABCA5Q8WWZ7 1642 aa26.4■■□□□ 1.82
PGAP3-203ENST00000378011 APLP2Q06481 763 aa26.39■■□□□ 1.81
PGAP3-203ENST00000378011 MRC2Q9UBG0 1479 aa26.38■■□□□ 1.81
PGAP3-203ENST00000378011 CUL7Q14999 1698 aa26.38■■□□□ 1.81
PGAP3-203ENST00000378011 TARBP1Q13395 1621 aaKnown RBP26.37■■□□□ 1.81
PGAP3-203ENST00000378011 GAPVD1Q14C86 1478 aa26.36■■□□□ 1.81
PGAP3-203ENST00000378011 CTTNBP2Q8WZ74 1663 aa26.22■■□□□ 1.79
PGAP3-203ENST00000378011 WDR62O43379 1518 aa26.21■■□□□ 1.79
PGAP3-203ENST00000378011 AQRO60306 1485 aaKnown RBP eCLIP26.21■■□□□ 1.79
PGAP3-203ENST00000378011 ERCC6Q03468 1493 aa26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms