RNA–Protein interactions for RNA: ENST00000430368.6

TCTN3-204, Transcript of tectonic family member 3, humanhuman

TSL 2 BASIC

Gene TCTN3, Length 1,778 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-204ENST00000430368 NISCHQ9Y2I1 1504 aa29.07■■■□□ 2.24
TCTN3-204ENST00000430368 CCDC180Q9P1Z9 1646 aa25.78■■□□□ 1.72
TCTN3-204ENST00000430368 ABCC9O60706 1549 aa25.15■■□□□ 1.62
TCTN3-204ENST00000430368 DCAF8L2P0C7V8 631 aa24.27■■□□□ 1.48
TCTN3-204ENST00000430368 ZCCHC6Q5VYS8 1495 aaKnown RBP24.27■■□□□ 1.48
TCTN3-204ENST00000430368 RB1CC1Q8TDY2 1594 aa24.17■■□□□ 1.46
TCTN3-204ENST00000430368 NACADO15069 1562 aa24.14■■□□□ 1.45
TCTN3-204ENST00000430368 MYO15BQ96JP2 1530 aa23.97■■□□□ 1.43
TCTN3-204ENST00000430368 DCAF1Q9Y4B6 1507 aa23.96■■□□□ 1.43
TCTN3-204ENST00000430368 UNC13AQ9UPW8 1703 aa23.82■■□□□ 1.4
TCTN3-204ENST00000430368 SCRIBQ14160 1630 aa23.67■■□□□ 1.38
TCTN3-204ENST00000430368 PABPN1Q86U42 306 aaKnown RBP eCLIP23.51■■□□□ 1.35
TCTN3-204ENST00000430368 BICRAQ9NZM4 1560 aa23.51■■□□□ 1.35
TCTN3-204ENST00000430368 SHROOM4Q9ULL8 1493 aa23.22■■□□□ 1.31
TCTN3-204ENST00000430368 DNAJC5BQ9UF47 199 aa22.91■■□□□ 1.26
TCTN3-204ENST00000430368 EIF4G1Q04637 1599 aaKnown RBP22.86■■□□□ 1.25
TCTN3-204ENST00000430368 CC2D2AQ9P2K1 1620 aa22.75■■□□□ 1.23
TCTN3-204ENST00000430368 CECR2Q9BXF3 1484 aa22.7■■□□□ 1.22
TCTN3-204ENST00000430368 SMARCA4P51532 1647 aa22.58■■□□□ 1.2
TCTN3-204ENST00000430368 BAZ1AQ9NRL2 1556 aaPredicted RBP22.51■■□□□ 1.19
TCTN3-204ENST00000430368 MROH2BQ7Z745 1585 aa22.47■■□□□ 1.19
TCTN3-204ENST00000430368 ATAD2BQ9ULI0 1458 aa22.35■■□□□ 1.17
TCTN3-204ENST00000430368 SMARCA2P51531 1590 aa22.31■■□□□ 1.16
TCTN3-204ENST00000430368 WIZO95785 1651 aa22.3■■□□□ 1.16
TCTN3-204ENST00000430368 PEG3Q9GZU2 1588 aa22.28■■□□□ 1.16
TCTN3-204ENST00000430368 NCAPD3P42695 1498 aa22.24■■□□□ 1.15
TCTN3-204ENST00000430368 RSF1Q96T23 1441 aaPredicted RBP22.21■■□□□ 1.15
TCTN3-204ENST00000430368 HMGXB3Q12766 1538 aa22.21■■□□□ 1.15
TCTN3-204ENST00000430368 BAZ1BQ9UIG0 1483 aaKnown RBP22.2■■□□□ 1.14
TCTN3-204ENST00000430368 TOP2AP11388 1531 aaKnown RBP21.97■■□□□ 1.11
TCTN3-204ENST00000430368 SUPT5HO00267 1087 aaKnown RBP21.84■■□□□ 1.09
TCTN3-204ENST00000430368 NESP48681 1621 aa21.84■■□□□ 1.09
TCTN3-204ENST00000430368 CCDC88BA6NC98 1476 aa21.71■■□□□ 1.07
TCTN3-204ENST00000430368 LAMC3Q9Y6N6 1575 aa21.7■■□□□ 1.06
TCTN3-204ENST00000430368 KIF21AQ7Z4S6 1674 aa21.64■■□□□ 1.05
TCTN3-204ENST00000430368 CADPSQ9ULU8 1353 aa21.62■■□□□ 1.05
TCTN3-204ENST00000430368 ERCC6Q03468 1493 aa21.62■■□□□ 1.05
TCTN3-204ENST00000430368 CFTRP13569 1480 aa21.55■■□□□ 1.04
TCTN3-204ENST00000430368 PRDM2Q13029 1718 aa21.55■■□□□ 1.04
TCTN3-204ENST00000430368 PDS5BQ9NTI5 1447 aa21.48■■□□□ 1.03
TCTN3-204ENST00000430368 THOC2Q8NI27 1593 aaKnown RBP21.46■■□□□ 1.03
TCTN3-204ENST00000430368 FANCD2Q9BXW9 1451 aa21.45■■□□□ 1.02
TCTN3-204ENST00000430368 CEP164Q9UPV0 1460 aa21.4■■□□□ 1.02
TCTN3-204ENST00000430368 MRC2Q9UBG0 1479 aa21.32■■□□□ 1
TCTN3-204ENST00000430368 WDR62O43379 1518 aa21.27■□□□□ 0.99
TCTN3-204ENST00000430368 URB2Q14146 1524 aaKnown RBP21.26■□□□□ 0.99
TCTN3-204ENST00000430368 CUX2O14529 1486 aa21.24■□□□□ 0.99
TCTN3-204ENST00000430368 TOPBP1Q92547 1522 aa21.13■□□□□ 0.97
TCTN3-204ENST00000430368 DNMBPQ6XZF7 1577 aa21.12■□□□□ 0.97
TCTN3-204ENST00000430368 ABCC8Q09428 1581 aa21.1■□□□□ 0.97
TCTN3-204ENST00000430368 CUX1P39880 1505 aa21.07■□□□□ 0.96
TCTN3-204ENST00000430368 SYNJ1O43426 1573 aa20.99■□□□□ 0.95
TCTN3-204ENST00000430368 POLA1P09884 1462 aaPredicted RBP20.97■□□□□ 0.95
TCTN3-204ENST00000430368 FGD5Q6ZNL6 1462 aa20.96■□□□□ 0.95
TCTN3-204ENST00000430368 WRNQ14191 1432 aaPredicted RBP eCLIP20.93■□□□□ 0.94
TCTN3-204ENST00000430368 BIVM-ERCC5R4GMW8 1640 aa20.93■□□□□ 0.94
TCTN3-204ENST00000430368 RAD54L2Q9Y4B4 1467 aa20.92■□□□□ 0.94
TCTN3-204ENST00000430368 TARBP1Q13395 1621 aaKnown RBP20.92■□□□□ 0.94
TCTN3-204ENST00000430368 ZNF608Q9ULD9 1512 aaPredicted RBP20.91■□□□□ 0.94
TCTN3-204ENST00000430368 TOP2BQ02880 1626 aa20.9■□□□□ 0.94
TCTN3-204ENST00000430368 IFT140Q96RY7 1462 aa20.89■□□□□ 0.94
TCTN3-204ENST00000430368 EIF4G3O43432 1585 aaKnown RBP20.86■□□□□ 0.93
TCTN3-204ENST00000430368 WDR97A6NE52 1622 aa20.84■□□□□ 0.93
TCTN3-204ENST00000430368 SOGA1O94964 1423 aa20.83■□□□□ 0.93
TCTN3-204ENST00000430368 AQRO60306 1485 aaKnown RBP eCLIP20.78■□□□□ 0.92
TCTN3-204ENST00000430368 TDRD9Q8NDG6 1382 aaKnown RBP20.75■□□□□ 0.91
TCTN3-204ENST00000430368 ABCA10Q8WWZ4 1543 aa20.7■□□□□ 0.9
TCTN3-204ENST00000430368 PBRM1Q86U86 1689 aa20.7■□□□□ 0.9
TCTN3-204ENST00000430368 ABCA5Q8WWZ7 1642 aa20.68■□□□□ 0.9
TCTN3-204ENST00000430368 GAPVD1Q14C86 1478 aa20.61■□□□□ 0.89
TCTN3-204ENST00000430368 CHD1O14646 1710 aa20.61■□□□□ 0.89
TCTN3-204ENST00000430368 SNAPC4Q5SXM2 1469 aa20.6■□□□□ 0.89
TCTN3-204ENST00000430368 GRIN2BQ13224 1484 aa20.56■□□□□ 0.88
TCTN3-204ENST00000430368 TRIM41Q8WV44 630 aa20.53■□□□□ 0.88
TCTN3-204ENST00000430368 MAGI1Q96QZ7 1491 aaPredicted RBP20.49■□□□□ 0.87
TCTN3-204ENST00000430368 FBLN2P98095 1184 aa20.49■□□□□ 0.87
TCTN3-204ENST00000430368 ADAMTS12P58397 1594 aa20.48■□□□□ 0.87
TCTN3-204ENST00000430368 RUSC2Q8N2Y8 1516 aa20.45■□□□□ 0.87
TCTN3-204ENST00000430368 ERICH3Q5RHP9 1530 aa20.45■□□□□ 0.86
TCTN3-204ENST00000430368 KIF27Q86VH2 1401 aa20.44■□□□□ 0.86
TCTN3-204ENST00000430368 SYNJ2O15056 1496 aa20.43■□□□□ 0.86
TCTN3-204ENST00000430368 CHIC1Q5VXU3 224 aa20.41■□□□□ 0.86
TCTN3-204ENST00000430368 CHMP7Q8WUX9 453 aaPredicted RBP20.38■□□□□ 0.85
TCTN3-204ENST00000430368 DNAJC5Q9H3Z4 198 aa20.38■□□□□ 0.85
TCTN3-204ENST00000430368 OSCARQ8IYS5 282 aa20.36■□□□□ 0.85
TCTN3-204ENST00000430368 GRIN2AQ12879 1464 aa20.35■□□□□ 0.85
TCTN3-204ENST00000430368 CUL7Q14999 1698 aa20.35■□□□□ 0.85
TCTN3-204ENST00000430368 IGF1RP08069 1367 aa20.34■□□□□ 0.85
TCTN3-204ENST00000430368 FHAD1B1AJZ9 1412 aa20.34■□□□□ 0.85
TCTN3-204ENST00000430368 CEP170Q5SW79 1584 aa20.31■□□□□ 0.84
TCTN3-204ENST00000430368 CLASP1Q7Z460 1538 aa20.27■□□□□ 0.84
TCTN3-204ENST00000430368 CARMIL1Q5VZK9 1371 aa20.23■□□□□ 0.83
TCTN3-204ENST00000430368 FAM9AQ8IZU1 332 aaPredicted RBP20.23■□□□□ 0.83
TCTN3-204ENST00000430368 NUP160Q12769 1436 aa20.21■□□□□ 0.83
TCTN3-204ENST00000430368 RIMBP3CA6NJZ7 1639 aa20.19■□□□□ 0.82
TCTN3-204ENST00000430368 RIMBP3BA6NNM3 1639 aa20.19■□□□□ 0.82
TCTN3-204ENST00000430368 RIMBP3Q9UFD9 1639 aa20.19■□□□□ 0.82
TCTN3-204ENST00000430368 ARHGEF11O15085 1522 aa20.17■□□□□ 0.82
TCTN3-204ENST00000430368 RAPGEF2Q9Y4G8 1499 aa20.14■□□□□ 0.82
TCTN3-204ENST00000430368 PRXQ9BXM0 1461 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms